Clone Name | rbastl28h03 |
---|---|
Clone Library Name | barley_pub |
>gb|AC108950.4| Mus musculus BAC clone RP23-458E21 from chromosome 9, complete sequence Length = 181083 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 376 caccagaaccaccaaggaact 396 ||||||||||||||||||||| Sbjct: 65393 caccagaaccaccaaggaact 65373
>gb|AC079244.29| Mus musculus strain C57BL/6J chromosome 9 clone rp23-343k17, complete sequence Length = 223861 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 376 caccagaaccaccaaggaact 396 ||||||||||||||||||||| Sbjct: 209221 caccagaaccaccaaggaact 209201
>gb|AC079245.35| Mus musculus strain C57BL/6J chromosome 9 clone rp23-426k2, complete sequence Length = 213098 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 376 caccagaaccaccaaggaact 396 ||||||||||||||||||||| Sbjct: 209103 caccagaaccaccaaggaact 209123
>gb|U41849.1|SCU41849 Saccharomyces cerevisiae chromosome XVI, left arm, cosmid 8204 Length = 35868 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 217 ctactcctacttctgccaaaa 237 ||||||||||||||||||||| Sbjct: 34446 ctactcctacttctgccaaaa 34426
>ref|NM_101907.2| Arabidopsis thaliana transferase, transferring glycosyl groups / tubulin binding AT1G20570 mRNA, complete cds Length = 2931 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 ttagatgctgaaacaacaag 124 |||||||||||||||||||| Sbjct: 1502 ttagatgctgaaacaacaag 1483
>gb|AC118193.9| Mus musculus chromosome 8, clone RP23-241A10, complete sequence Length = 222682 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 311 gataggaggctaacatggcggtca 334 |||||||||||||||| ||||||| Sbjct: 150567 gataggaggctaacatagcggtca 150544
>gb|AC133206.3| Mus musculus BAC clone RP23-110D10 from chromosome 1, complete sequence Length = 177383 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 aagagcatgaaagcacaggc 266 |||||||||||||||||||| Sbjct: 116549 aagagcatgaaagcacaggc 116568
>gb|AC122734.6| Mus musculus chromosome 10, clone RP24-108E17, complete sequence Length = 178230 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 aatttttgtctgactgaaca 56 |||||||||||||||||||| Sbjct: 91773 aatttttgtctgactgaaca 91792
>emb|AL138772.8| Human DNA sequence from clone RP4-576A20 on chromosome 10, complete sequence Length = 55835 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 taaaggttgcttctgccaga 189 |||||||||||||||||||| Sbjct: 27805 taaaggttgcttctgccaga 27786
>gb|AC097468.3| Homo sapiens BAC clone RP11-33O4 from 2, complete sequence Length = 169741 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 333 caagaattacagaaaggcacccat 356 ||||||||| |||||||||||||| Sbjct: 108467 caagaattagagaaaggcacccat 108490
>gb|AC069251.5|AC069251 Genomic sequence for Arabidopsis thaliana BAC F2D10 from chromosome I, complete sequence Length = 143879 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 ttagatgctgaaacaacaag 124 |||||||||||||||||||| Sbjct: 14991 ttagatgctgaaacaacaag 15010
>gb|AC027665.4|AC027665 Genomic sequence for Arabidopsis thaliana BAC F5M15 from chromosome I, complete sequence Length = 99231 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 ttagatgctgaaacaacaag 124 |||||||||||||||||||| Sbjct: 40124 ttagatgctgaaacaacaag 40105
>gb|AC091681.44| Mus musculus strain C57BL/6J chromosome 10 clone rp23-111d4, complete sequence Length = 194809 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 aatttttgtctgactgaaca 56 |||||||||||||||||||| Sbjct: 65635 aatttttgtctgactgaaca 65654 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,245,616 Number of Sequences: 3902068 Number of extensions: 3245616 Number of successful extensions: 64184 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 64164 Number of HSP's gapped (non-prelim): 20 length of query: 429 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 407 effective length of database: 17,147,199,772 effective search space: 6978910307204 effective search space used: 6978910307204 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)