>APE2_YEAST (P32454) Aminopeptidase 2 (EC 3.4.11.-) (Aminopeptidase II) (AP-II)|
           (YscII)
          Length = 844

 Score = 39.3 bits (90), Expect = 0.002
 Identities = 17/41 (41%), Positives = 27/41 (65%)
 Frame = -2

Query: 386 SPFTSEEKAAEVSQFFATRVKPSFERALKQSLERVRISARW 264
           S FTS +K  E+ +FFAT+    F+++L QSL+ +   A+W
Sbjct: 803 SGFTSMQKIDEIKKFFATKSTKGFDQSLAQSLDTITSKAQW 843

>AAP1_YEAST (P37898) Alanine/arginine aminopeptidase (EC 3.4.11.-)|
          Length = 856

 Score = 36.2 bits (82), Expect = 0.019
 Identities = 14/40 (35%), Positives = 26/40 (65%)
 Frame = -2

Query: 380 FTSEEKAAEVSQFFATRVKPSFERALKQSLERVRISARWI 261
           FTS E   ++S F++ +V   F++ L Q+L+ +R  A+W+
Sbjct: 799 FTSFEALEKISAFYSRKVTKGFDQTLAQALDTIRSKAQWV 838

>SYI_CHLAB (Q5L5L0) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA|
            ligase) (IleRS)
          Length = 1043

 Score = 34.3 bits (77), Expect = 0.073
 Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
 Frame = -2

Query: 356  EVSQFFATRVKPSFERALKQSLERVRISARWIDSIKSEPSLAQT-VQQLLLQEF*AAPLY 180
            E   F  T VKP+F     +SL R R+  +  D  K+  SL+Q  +QQLL QE+ +  L 
Sbjct: 862  EAPSFVKTTVKPNF-----RSLGR-RVGEKIKDIQKALASLSQAQIQQLLTQEYLSLNLG 915

Query: 179  EEEIMCH 159
             EEI+ H
Sbjct: 916  SEEIVLH 922

>APE1_SCHPO (Q9USX1) Aminopeptidase 1 (EC 3.4.11.-) (Aminopeptidase I)|
          Length = 882

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 16/48 (33%), Positives = 27/48 (56%)
 Frame = -2

Query: 401 VNSTVSPFTSEEKAAEVSQFFATRVKPSFERALKQSLERVRISARWID 258
           V    S FT      ++ +FFA +    +ERAL+QSL+ +  ++ +ID
Sbjct: 819 VRFVTSGFTHASAIDKIKEFFADKDTKLYERALQQSLDTISANSSFID 866

>RS6_RAT (P62755) 40S ribosomal protein S6|
          Length = 249

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 16/46 (34%), Positives = 29/46 (63%)
 Frame = -2

Query: 374 SEEKAAEVSQFFATRVKPSFERALKQSLERVRISARWIDSIKSEPS 237
           ++E+AAE ++  A R+K + E+  +Q  +R R+S+    + KSE S
Sbjct: 202 NKEEAAEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESS 247

>RS6_MOUSE (P62754) 40S ribosomal protein S6 (Phosphoprotein NP33)|
          Length = 249

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 16/46 (34%), Positives = 29/46 (63%)
 Frame = -2

Query: 374 SEEKAAEVSQFFATRVKPSFERALKQSLERVRISARWIDSIKSEPS 237
           ++E+AAE ++  A R+K + E+  +Q  +R R+S+    + KSE S
Sbjct: 202 NKEEAAEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESS 247

>RS6_HUMAN (P62753) 40S ribosomal protein S6 (Phosphoprotein NP33)|
          Length = 249

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 16/46 (34%), Positives = 29/46 (63%)
 Frame = -2

Query: 374 SEEKAAEVSQFFATRVKPSFERALKQSLERVRISARWIDSIKSEPS 237
           ++E+AAE ++  A R+K + E+  +Q  +R R+S+    + KSE S
Sbjct: 202 NKEEAAEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESS 247

>AMPN_RABIT (P15541) Aminopeptidase N (EC 3.4.11.2) (rbAPN) (Alanyl|
            aminopeptidase) (Microsomal aminopeptidase)
            (Aminopeptidase M) (CD13 antigen)
          Length = 965

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
 Frame = -2

Query: 401  VNSTVSPFTSEEKAAEVSQFFATRVKPSF---ERALKQSLERVRISARWIDSIK 249
            + +    F++E +  ++ QF    +   F    RAL+Q+LE+ R + +W+   K
Sbjct: 900  IRAVTRRFSTEYELQQLEQFRLNNLDTGFGSGTRALEQALEQTRANIKWVQENK 953

>AMPN_MOUSE (P97449) Aminopeptidase N (EC 3.4.11.2) (mAPN) (Alanyl|
            aminopeptidase) (Microsomal aminopeptidase)
            (Aminopeptidase M) (Membrane protein p161) (CD13 antigen)
          Length = 965

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
 Frame = -2

Query: 380  FTSEEKAAEVSQFFATRVKPSF---ERALKQSLERVRISARWIDSIK 249
            F+SE +  ++ QF A      F    RAL+Q+LE+ R +  W+   K
Sbjct: 907  FSSEFELQQLEQFKADNSATGFGTGTRALEQALEKTRANIDWVKENK 953

>CLPB_THET2 (Q72IK9) Chaperone clpB|
          Length = 854

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = +3

Query: 240 GLALDAVDPSSADPHPLEALLQRSFERRLHASGKELGNLSSFLLGG 377
           GLA   ++ + ADP  L+ L +R   R     G E+G   +  L G
Sbjct: 44  GLAWRLLEKAGADPKALKELQERELSRLPKVEGAEVGQYLTSRLSG 89

>DFA1_SYNY3 (Q55393) Diflavin flavoprotein A 1 (EC 1.-.-.-) (SsATF573)|
           (NADH:oxygen oxidoreductase)
          Length = 573

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = +3

Query: 240 GLALDAVDPSSADPHPLEALLQRSFERRLHASGKELG 350
           G+ +D VD SSADP  ++ L+        HASG  LG
Sbjct: 291 GVGVDMVDLSSADPQEIQELVG-------HASGVVLG 320

>AMPN_PIG (P15145) Aminopeptidase N (EC 3.4.11.2) (pAPN) (Alanyl|
            aminopeptidase) (Microsomal aminopeptidase)
            (Aminopeptidase M) (gp130) (CD13 antigen)
          Length = 962

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
 Frame = -2

Query: 380  FTSEEKAAEVSQFFATRVKPSF---ERALKQSLERVRISARWIDSIK 249
            F+SE +  ++ QF    +   F    RAL+Q+LE+ + + +W+   K
Sbjct: 905  FSSEFELQQLEQFKKNNMDVGFGSGTRALEQALEKTKANIKWVKENK 951

>IBP3_BOVIN (P20959) Insulin-like growth factor-binding protein 3 precursor|
           (IGFBP-3) (IBP-3) (IGF-binding protein 3)
          Length = 291

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 17/43 (39%), Positives = 21/43 (48%)
 Frame = +3

Query: 264 PSSADPHPLEALLQRSFERRLHASGKELGNLSSFLLGGER*NG 392
           P   DP PL+ALL     R L A+   +G L  +LL     NG
Sbjct: 98  PPPGDPRPLQALLD---GRGLCANASAVGRLRPYLLPSASGNG 137

>AMPN_FELCA (P79171) Aminopeptidase N (EC 3.4.11.2) (fAPN) (Alanyl|
            aminopeptidase) (Microsomal aminopeptidase)
            (Aminopeptidase M) (CD13 antigen)
          Length = 966

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 13/54 (24%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
 Frame = -2

Query: 401  VNSTVSPFTSEEKAAEVSQFFATRVKPSF---ERALKQSLERVRISARWIDSIK 249
            + +    F++E +  ++ QF    +   F    RAL+Q+LE+ + + +W+   K
Sbjct: 902  IQAVTRRFSTEFELQQLEQFKKNNMDTGFGSATRALEQALEKTKANLKWVKENK 955


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,556,888
Number of Sequences: 219361
Number of extensions: 791341
Number of successful extensions: 1958
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1958
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 1359926328
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)