ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl28h01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_483801.1| Oryza sativa (japonica cultivar-group), mRNA 244 2e-61
2dbj|AK066773.1| Oryza sativa (japonica cultivar-group) cDNA clon... 244 2e-61
3dbj|AK064900.1| Oryza sativa (japonica cultivar-group) cDNA clon... 244 2e-61
4gb|AY105426.1| Zea mays PCO146438 mRNA sequence 192 6e-46
5gb|BT024073.1| Zea mays clone EL01N0507C07 mRNA sequence 188 1e-44
6dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 131 2e-27
7dbj|AP004587.3| Oryza sativa (japonica cultivar-group) genomic D... 131 2e-27
8ref|NM_105053.3| Arabidopsis thaliana membrane alanyl aminopepti... 46 0.089
9gb|BT010361.1| Arabidopsis thaliana At1g63770 mRNA, complete cds 46 0.089
10gb|AY960336.1| Arabidopsis thaliana M1 aminopeptidase mRNA, comp... 46 0.089
11gb|BT002074.1| Arabidopsis thaliana putative aminopeptidase (At1... 46 0.089
12emb|AL031122.3|HS503N11 Human DNA sequence from clone RP3-503N11... 44 0.35
13ref|NM_202354.1| Arabidopsis thaliana membrane alanyl aminopepti... 42 1.4
14gb|AC108116.2| Homo sapiens chromosome 5 clone RP11-318B23, comp... 42 1.4
15gb|AC008400.5| Homo sapiens chromosome 5 clone CTC-264D2, comple... 42 1.4
16emb|BX817670.1|CNS0AE3V Arabidopsis thaliana Full-length cDNA Co... 42 1.4
17gb|AC011622.6|AC011622 Arabidopsis thaliana chromosome 1 BAC F24... 42 1.4
18gb|AC009483.3|AC009483 Homo sapiens BAC clone RP11-303H5 from 2,... 42 1.4
19gb|AC005281.2|AC005281 Homo sapiens PAC clone RP4-722F20 from 7q... 42 1.4
20ref|XM_715357.1| Candida albicans SC5314 ubiquitin-protein ligas... 40 5.5
21ref|XM_715127.1| Candida albicans SC5314 ubiquitin-protein ligas... 40 5.5
22gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 5.5
23gb|AC159304.2| Mus musculus BAC clone RP23-211E20 from chromosom... 40 5.5
24gb|AY129950.1| Homo sapiens cAMP-specific phosphodiesterase 8B (... 40 5.5
25gb|AC092263.7| Oryza sativa chromosome 3 BAC OSJNBa0033P04 genom... 40 5.5
26gb|AC108931.4| Homo sapiens BAC clone RP11-284E20 from 4, comple... 40 5.5
27gb|AC097489.2| Homo sapiens BAC clone RP11-226A18 from 4, comple... 40 5.5
28dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
29dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
30dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
31gb|AC022414.8| Homo sapiens chromosome 5 clone CTC-316M18, compl... 40 5.5
32gb|AC104512.11| Drosophila melanogaster BAC RP98-39C15 (Roswell... 40 5.5
33dbj|AP003577.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
34emb|AL157955.5|CNS01RGE Human chromosome 14 DNA sequence BAC R-3... 40 5.5
35gb|AE003442.3| Drosophila melanogaster chromosome X, section 26 ... 40 5.5
36gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.5
37emb|AL731875.2|CNS08C8F Oryza sativa chromosome 12, . BAC OJ1060... 40 5.5
38gb|CP000173.1| Drosophila melanogaster genomic scaffold 21100002... 40 5.5 
>ref|XM_483801.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3145

 Score =  244 bits (123), Expect = 2e-61
 Identities = 201/227 (88%)
 Strand = Plus / Minus

                                                                        
Query: 178  gctatctcataaacattttcagagagtccattggctgaaataatcatctccaactgggcc 237
            |||||||| || ||||| || || || ||||||||||| |  |||||||||| ||| |||
Sbjct: 2887 gctatctcgtacacattctctgatagcccattggctgacacgatcatctccagctgagcc 2828

                                                                        
Query: 238  ttagcaagagcttgtctcgtctcgtcatatctcctccatcgagagaatgctgacaccatg 297
            |||||||||||||||||  |||| ||||||| |||||| |||||||| ||||||||||||
Sbjct: 2827 ttagcaagagcttgtctgctctcatcatatcgcctccaccgagagaaagctgacaccatg 2768

                                                                        
Query: 298  cgggatgccacctgaggatttattttgtcgagctgtaaaacaacttcacccaagaacttg 357
            ||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 2767 cgggaggccacctgaggatttatcttgtctagctgtaaaacaacttcacccaagaacttg 2708

                                                           
Query: 358  taaccagaaccatctttcgcgtgaaaactcacaggtgacccacaaaa 404
            |||||||| |||||||| || || ||| ||||||| |||||||||||
Sbjct: 2707 taaccagagccatcttttgcatggaaattcacaggggacccacaaaa 2661
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>dbj|AK066773.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013081C24, full
            insert sequence
          Length = 2519

 Score =  244 bits (123), Expect = 2e-61
 Identities = 201/227 (88%)
 Strand = Plus / Minus

                                                                        
Query: 178  gctatctcataaacattttcagagagtccattggctgaaataatcatctccaactgggcc 237
            |||||||| || ||||| || || || ||||||||||| |  |||||||||| ||| |||
Sbjct: 2305 gctatctcgtacacattctctgatagcccattggctgacacgatcatctccagctgagcc 2246

                                                                        
Query: 238  ttagcaagagcttgtctcgtctcgtcatatctcctccatcgagagaatgctgacaccatg 297
            |||||||||||||||||  |||| ||||||| |||||| |||||||| ||||||||||||
Sbjct: 2245 ttagcaagagcttgtctgctctcatcatatcgcctccaccgagagaaagctgacaccatg 2186

                                                                        
Query: 298  cgggatgccacctgaggatttattttgtcgagctgtaaaacaacttcacccaagaacttg 357
            ||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 2185 cgggaggccacctgaggatttatcttgtctagctgtaaaacaacttcacccaagaacttg 2126

                                                           
Query: 358  taaccagaaccatctttcgcgtgaaaactcacaggtgacccacaaaa 404
            |||||||| |||||||| || || ||| ||||||| |||||||||||
Sbjct: 2125 taaccagagccatcttttgcatggaaattcacaggggacccacaaaa 2079
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>dbj|AK064900.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000L14, full
            insert sequence
          Length = 3181

 Score =  244 bits (123), Expect = 2e-61
 Identities = 201/227 (88%)
 Strand = Plus / Minus

                                                                        
Query: 178  gctatctcataaacattttcagagagtccattggctgaaataatcatctccaactgggcc 237
            |||||||| || ||||| || || || ||||||||||| |  |||||||||| ||| |||
Sbjct: 2923 gctatctcgtacacattctctgatagcccattggctgacacgatcatctccagctgagcc 2864

                                                                        
Query: 238  ttagcaagagcttgtctcgtctcgtcatatctcctccatcgagagaatgctgacaccatg 297
            |||||||||||||||||  |||| ||||||| |||||| |||||||| ||||||||||||
Sbjct: 2863 ttagcaagagcttgtctgctctcatcatatcgcctccaccgagagaaagctgacaccatg 2804

                                                                        
Query: 298  cgggatgccacctgaggatttattttgtcgagctgtaaaacaacttcacccaagaacttg 357
            ||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 2803 cgggaggccacctgaggatttatcttgtctagctgtaaaacaacttcacccaagaacttg 2744

                                                           
Query: 358  taaccagaaccatctttcgcgtgaaaactcacaggtgacccacaaaa 404
            |||||||| |||||||| || || ||| ||||||| |||||||||||
Sbjct: 2743 taaccagagccatcttttgcatggaaattcacaggggacccacaaaa 2697
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>gb|AY105426.1| Zea mays PCO146438 mRNA sequence
          Length = 3165

 Score =  192 bits (97), Expect = 6e-46
 Identities = 181/209 (86%)
 Strand = Plus / Minus

                                                                        
Query: 193  ttttcagagagtccattggctgaaataatcatctccaactgggccttagcaagagcttgt 252
            ||||| ||||| |||||||| || |  |||||||||| ||||||||||||||||||||||
Sbjct: 2981 ttttcggagagcccattggccgacacgatcatctccagctgggccttagcaagagcttgt 2922

                                                                        
Query: 253  ctcgtctcgtcatatctcctccatcgagagaatgctgacaccatgcgggatgccacctga 312
            || |||| ||| || | |||||| ||||| |||||||| ||||||||||| |||||||||
Sbjct: 2921 ctggtcttgtcgtaccgcctccaccgagaaaatgctgaaaccatgcgggaggccacctga 2862

                                                                        
Query: 313  ggatttattttgtcgagctgtaaaacaacttcacccaagaacttgtaaccagaaccatct 372
            || ||||| ||||| ||||| ||||| |  ||||||||||||||||| ||||||||||||
Sbjct: 2861 gggtttatcttgtcaagctgcaaaacgatctcacccaagaacttgtacccagaaccatct 2802

                                         
Query: 373  ttcgcgtgaaaactcacaggtgacccaca 401
            |||||||| ||  |||||||||| |||||
Sbjct: 2801 ttcgcgtggaagttcacaggtgagccaca 2773
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>gb|BT024073.1| Zea mays clone EL01N0507C07 mRNA sequence
          Length = 2068

 Score =  188 bits (95), Expect = 1e-44
 Identities = 176/203 (86%)
 Strand = Plus / Minus

                                                                        
Query: 199  gagagtccattggctgaaataatcatctccaactgggccttagcaagagcttgtctcgtc 258
            ||||| |||||||| || |  |||||||||| |||||||||||||||||||||||| |||
Sbjct: 1849 gagagcccattggccgacacgatcatctccagctgggccttagcaagagcttgtctggtc 1790

                                                                        
Query: 259  tcgtcatatctcctccatcgagagaatgctgacaccatgcgggatgccacctgaggattt 318
            | ||| || | |||||| ||||| |||||||| ||||||||||| ||||||||||| |||
Sbjct: 1789 ttgtcgtaccgcctccaccgagaaaatgctgaaaccatgcgggaggccacctgagggttt 1730

                                                                        
Query: 319  attttgtcgagctgtaaaacaacttcacccaagaacttgtaaccagaaccatctttcgcg 378
            || ||||| ||||| ||||| |  ||||||||||||||||| ||||||||||||||||||
Sbjct: 1729 atcttgtcaagctgcaaaacgatctcacccaagaacttgtacccagaaccatctttcgcg 1670

                                   
Query: 379  tgaaaactcacaggtgacccaca 401
            || ||  |||||||||| |||||
Sbjct: 1669 tggaagttcacaggtgagccaca 1647
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  131 bits (66), Expect = 2e-27
 Identities = 90/98 (91%)
 Strand = Plus / Plus

                                                                            
Query: 307      acctgaggatttattttgtcgagctgtaaaacaacttcacccaagaacttgtaaccagaa 366
                |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| 
Sbjct: 28166653 acctgaggatttatcttgtctagctgtaaaacaacttcacccaagaacttgtaaccagag 28166712

                                                      
Query: 367      ccatctttcgcgtgaaaactcacaggtgacccacaaaa 404
                |||||||| || || ||| ||||||| |||||||||||
Sbjct: 28166713 ccatcttttgcatggaaattcacaggggacccacaaaa 28166750



 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 68/75 (90%)
 Strand = Plus / Plus

                                                                            
Query: 236      ccttagcaagagcttgtctcgtctcgtcatatctcctccatcgagagaatgctgacacca 295
                |||||||||||||||||||  |||| ||||||| |||||| |||||||| ||||||||||
Sbjct: 28166495 ccttagcaagagcttgtctgctctcatcatatcgcctccaccgagagaaagctgacacca 28166554

                               
Query: 296      tgcgggatgccacct 310
                ||||||| |||||||
Sbjct: 28166555 tgcgggaggccacct 28166569
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>dbj|AP004587.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0543D10
          Length = 134866

 Score =  131 bits (66), Expect = 2e-27
 Identities = 90/98 (91%)
 Strand = Plus / Plus

                                                                         
Query: 307   acctgaggatttattttgtcgagctgtaaaacaacttcacccaagaacttgtaaccagaa 366
             |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| 
Sbjct: 50126 acctgaggatttatcttgtctagctgtaaaacaacttcacccaagaacttgtaaccagag 50185

                                                   
Query: 367   ccatctttcgcgtgaaaactcacaggtgacccacaaaa 404
             |||||||| || || ||| ||||||| |||||||||||
Sbjct: 50186 ccatcttttgcatggaaattcacaggggacccacaaaa 50223



 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 68/75 (90%)
 Strand = Plus / Plus

                                                                         
Query: 236   ccttagcaagagcttgtctcgtctcgtcatatctcctccatcgagagaatgctgacacca 295
             |||||||||||||||||||  |||| ||||||| |||||| |||||||| ||||||||||
Sbjct: 49968 ccttagcaagagcttgtctgctctcatcatatcgcctccaccgagagaaagctgacacca 50027

                            
Query: 296   tgcgggatgccacct 310
             ||||||| |||||||
Sbjct: 50028 tgcgggaggccacct 50042
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>ref|NM_105053.3| Arabidopsis thaliana membrane alanyl aminopeptidase AT1G63770
            transcript variant AT1G63770.1 mRNA, complete cds
          Length = 3229

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 68/83 (81%)
 Strand = Plus / Minus

                                                                        
Query: 289  gacaccatgcgggatgccacctgaggatttattttgtcgagctgtaaaacaacttcaccc 348
            |||||||| || || || |||||||| || | |||||| | ||| | |||||  ||||||
Sbjct: 2811 gacaccatacgagaagcaacctgagggttcaatttgtctaactggacaacaatgtcaccc 2752

                                   
Query: 349  aagaacttgtaaccagaaccatc 371
            |||||||||||||| || |||||
Sbjct: 2751 aagaacttgtaacctgatccatc 2729
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>gb|BT010361.1| Arabidopsis thaliana At1g63770 mRNA, complete cds
          Length = 2652

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 68/83 (81%)
 Strand = Plus / Minus

                                                                        
Query: 289  gacaccatgcgggatgccacctgaggatttattttgtcgagctgtaaaacaacttcaccc 348
            |||||||| || || || |||||||| || | |||||| | ||| | |||||  ||||||
Sbjct: 2519 gacaccatacgagaagcaacctgagggttcaatttgtctaactggacaacaatgtcaccc 2460

                                   
Query: 349  aagaacttgtaaccagaaccatc 371
            |||||||||||||| || |||||
Sbjct: 2459 aagaacttgtaacctgatccatc 2437
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>gb|AY960336.1| Arabidopsis thaliana M1 aminopeptidase mRNA, complete cds,
            alternatively spliced
          Length = 3051

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 68/83 (81%)
 Strand = Plus / Minus

                                                                        
Query: 289  gacaccatgcgggatgccacctgaggatttattttgtcgagctgtaaaacaacttcaccc 348
            |||||||| || || || |||||||| || | |||||| | ||| | |||||  ||||||
Sbjct: 2747 gacaccatacgagaagcaacctgagggttcaatttgtctaactggacaacaatgtcaccc 2688

                                   
Query: 349  aagaacttgtaaccagaaccatc 371
            |||||||||||||| || |||||
Sbjct: 2687 aagaacttgtaacctgatccatc 2665
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>gb|BT002074.1| Arabidopsis thaliana putative aminopeptidase (At1g63770) mRNA,
            complete cds
          Length = 3056

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 68/83 (81%)
 Strand = Plus / Minus

                                                                        
Query: 289  gacaccatgcgggatgccacctgaggatttattttgtcgagctgtaaaacaacttcaccc 348
            |||||||| || || || |||||||| || | |||||| | ||| | |||||  ||||||
Sbjct: 2749 gacaccatacgagaagcaacctgagggttcaatttgtctaactggacaacaatgtcaccc 2690

                                   
Query: 349  aagaacttgtaaccagaaccatc 371
            |||||||||||||| || |||||
Sbjct: 2689 aagaacttgtaacctgatccatc 2667
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>emb|AL031122.3|HS503N11 Human DNA sequence from clone RP3-503N11 on chromosome 6p24.1-24.3,
             complete sequence
          Length = 94749

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 354   cttgtaaccagaaccatctttc 375
             ||||||||||||||||||||||
Sbjct: 49323 cttgtaaccagaaccatctttc 49302
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>ref|NM_202354.1| Arabidopsis thaliana membrane alanyl aminopeptidase AT1G63770
            transcript variant AT1G63770.2 mRNA, complete cds
          Length = 3331

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 343  tcacccaagaacttgtaaccagaaccatc 371
            |||||||||||||||||||| || |||||
Sbjct: 2753 tcacccaagaacttgtaacctgatccatc 2725
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>gb|AC108116.2| Homo sapiens chromosome 5 clone RP11-318B23, complete sequence
          Length = 203171

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 184    tcataaacattttcagagagt 204
              |||||||||||||||||||||
Sbjct: 102019 tcataaacattttcagagagt 101999
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>gb|AC008400.5| Homo sapiens chromosome 5 clone CTC-264D2, complete sequence
          Length = 117409

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 184   tcataaacattttcagagagt 204
             |||||||||||||||||||||
Sbjct: 29677 tcataaacattttcagagagt 29697
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>emb|BX817670.1|CNS0AE3V Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL36ZA11 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 654

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 343 tcacccaagaacttgtaaccagaaccatc 371
           |||||||||||||||||||| || |||||
Sbjct: 187 tcacccaagaacttgtaacctgatccatc 159
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>gb|AC011622.6|AC011622 Arabidopsis thaliana chromosome 1 BAC F24D7 genomic sequence, complete
             sequence
          Length = 87575

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 343   tcacccaagaacttgtaaccagaaccatc 371
             |||||||||||||||||||| || |||||
Sbjct: 10530 tcacccaagaacttgtaacctgatccatc 10502
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>gb|AC009483.3|AC009483 Homo sapiens BAC clone RP11-303H5 from 2, complete sequence
          Length = 206589

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 184   tcataaacattttcagagagt 204
             |||||||||||||||||||||
Sbjct: 34757 tcataaacattttcagagagt 34737
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>gb|AC005281.2|AC005281 Homo sapiens PAC clone RP4-722F20 from 7q31.1-q31.3, complete sequence
          Length = 107438

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 176   aggctatctcataaacatttt 196
             |||||||||||||||||||||
Sbjct: 70494 aggctatctcataaacatttt 70514
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>ref|XM_715357.1| Candida albicans SC5314 ubiquitin-protein ligase (CaO19_2697), mRNA
          Length = 5697

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 312  aggatttattttgtcgagct 331
            ||||||||||||||||||||
Sbjct: 1094 aggatttattttgtcgagct 1113
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>ref|XM_715127.1| Candida albicans SC5314 ubiquitin-protein ligase (CaO19_10212), mRNA
          Length = 5697

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 312  aggatttattttgtcgagct 331
            ||||||||||||||||||||
Sbjct: 1094 aggatttattttgtcgagct 1113
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 119      actggcaaaatcaaatttgt 138
                ||||||||||||||||||||
Sbjct: 36039730 actggcaaaatcaaatttgt 36039749
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>gb|AC159304.2| Mus musculus BAC clone RP23-211E20 from chromosome 13, complete sequence
          Length = 195948

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 56     aaatacagcaaaatatattcagtt 79
              ||||||| ||||||||||||||||
Sbjct: 113217 aaatacatcaaaatatattcagtt 113194
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>gb|AY129950.1| Homo sapiens cAMP-specific phosphodiesterase 8B (PDE8B) gene,
             alternatively spliced, complete cds
          Length = 216589

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 179   ctatctcataaacattttca 198
             ||||||||||||||||||||
Sbjct: 13822 ctatctcataaacattttca 13841
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>gb|AC092263.7| Oryza sativa chromosome 3 BAC OSJNBa0033P04 genomic sequence, complete
              sequence
          Length = 164179

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 119    actggcaaaatcaaatttgt 138
              ||||||||||||||||||||
Sbjct: 101241 actggcaaaatcaaatttgt 101260
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>gb|AC108931.4| Homo sapiens BAC clone RP11-284E20 from 4, complete sequence
          Length = 114175

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 216   aataatcatctccaactggg 235
             ||||||||||||||||||||
Sbjct: 98802 aataatcatctccaactggg 98821
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>gb|AC097489.2| Homo sapiens BAC clone RP11-226A18 from 4, complete sequence
          Length = 152039

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 1      gaagccaaaattcaaatgta 20
              ||||||||||||||||||||
Sbjct: 142140 gaagccaaaattcaaatgta 142159
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 126      aaatcaaatttgtttctttgcatc 149
                |||||||||| |||||||||||||
Sbjct: 11217526 aaatcaaattagtttctttgcatc 11217503
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 24       ccactatagtagcctgttat 43
                ||||||||||||||||||||
Sbjct: 16754860 ccactatagtagcctgttat 16754841
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 119      actggcaaaatcaaatttgt 138
                ||||||||||||||||||||
Sbjct: 36129804 actggcaaaatcaaatttgt 36129823
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>gb|AC022414.8| Homo sapiens chromosome 5 clone CTC-316M18, complete sequence
          Length = 128811

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 179   ctatctcataaacattttca 198
             ||||||||||||||||||||
Sbjct: 75270 ctatctcataaacattttca 75251
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>gb|AC104512.11| Drosophila melanogaster  BAC RP98-39C15 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 172654

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 120    ctggcaaaatcaaatttgtt 139
              ||||||||||||||||||||
Sbjct: 116140 ctggcaaaatcaaatttgtt 116159
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>dbj|AP003577.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0664F03
          Length = 184242

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 24     ccactatagtagcctgttat 43
              ||||||||||||||||||||
Sbjct: 106347 ccactatagtagcctgttat 106328
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>emb|AL157955.5|CNS01RGE Human chromosome 14 DNA sequence BAC R-300J18 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 177169

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 55     taaatacagcaaaatatattcagt 78
              ||||||||||||||||||| ||||
Sbjct: 120760 taaatacagcaaaatatatacagt 120783
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>gb|AE003442.3| Drosophila melanogaster chromosome X, section 26 of 74 of the complete
             sequence
          Length = 316794

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   ctggcaaaatcaaatttgtt 139
             ||||||||||||||||||||
Sbjct: 27532 ctggcaaaatcaaatttgtt 27513
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 126      aaatcaaatttgtttctttgcatc 149
                |||||||||| |||||||||||||
Sbjct: 11217197 aaatcaaattagtttctttgcatc 11217174
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>emb|AL731875.2|CNS08C8F Oryza sativa chromosome 12, . BAC OJ1060_G11 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 108805

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 126   aaatcaaatttgtttctttgcatc 149
             |||||||||| |||||||||||||
Sbjct: 39132 aaatcaaattagtttctttgcatc 39155
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>gb|CP000173.1| Drosophila melanogaster genomic scaffold 211000022279541
          Length = 57826

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 125   aaaatcaaatttgtttcttt 144
             ||||||||||||||||||||
Sbjct: 36536 aaaatcaaatttgtttcttt 36555


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,463,604
Number of Sequences: 3902068
Number of extensions: 4463604
Number of successful extensions: 99122
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98973
Number of HSP's gapped (non-prelim): 149
length of query: 408
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 386
effective length of database: 17,147,199,772
effective search space: 6618819111992
effective search space used: 6618819111992
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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