ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl28g09 |
|---|---|
| Clone Library Name | barley_pub |
>LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12)| (LOX-100) (LOX2:Hv:1) Length = 936 Score = 143 bits (360), Expect = 1e-34 Identities = 71/76 (93%), Positives = 71/76 (93%), Gaps = 5/76 (6%) Frame = -3 Query: 358 TKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPS-----DGDPT 194 TKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPS DGDPT Sbjct: 861 TKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDGDPT 920 Query: 193 DEKMVMEMGIPNSISI 146 DEKMVMEMGIPNSISI Sbjct: 921 DEKMVMEMGIPNSISI 936
>LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:2) Length = 932 Score = 100 bits (249), Expect = 9e-22 Identities = 45/70 (64%), Positives = 57/70 (81%) Frame = -3 Query: 355 KDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVM 176 +DG +++AF+ F++ R I EQV+EWN D R+NRHGAG+VPYVLLRP +G+P D K VM Sbjct: 863 RDGEVDKAFQVFQKKMRDIAEQVEEWNKDDSRRNRHGAGVVPYVLLRPLNGNPMDAKTVM 922 Query: 175 EMGIPNSISI 146 EMGIPNSISI Sbjct: 923 EMGIPNSISI 932
>LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:3) Length = 896 Score = 54.3 bits (129), Expect = 7e-08 Identities = 30/67 (44%), Positives = 40/67 (59%) Frame = -3 Query: 346 VINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMG 167 ++ AFE+F ++ +D NN+P+ KNR GAG+VPY LL+ P E V G Sbjct: 835 MVKAAFEKFSGRLKEAEGTIDMRNNNPENKNRCGAGIVPYELLK-----PFSEPGVTGRG 889 Query: 166 IPNSISI 146 IPNSISI Sbjct: 890 IPNSISI 896
>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)| Length = 899 Score = 52.0 bits (123), Expect = 4e-07 Identities = 27/71 (38%), Positives = 39/71 (54%) Frame = -3 Query: 358 TKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMV 179 T D A EF R+ E+++ N DP R+NR GAG++PY L+ PS G + Sbjct: 834 TADPAALAAAREFAADVRRAEEEIERRNADPSRRNRCGAGVLPYELMAPSSGPG-----I 888 Query: 178 MEMGIPNSISI 146 G+PNS++I Sbjct: 889 TCRGVPNSVTI 899
>LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13.11.12)| Length = 896 Score = 51.6 bits (122), Expect = 5e-07 Identities = 32/67 (47%), Positives = 39/67 (58%) Frame = -3 Query: 346 VINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMG 167 VIN AFE FK + + +DE N + KNR GAG+V Y LL+ PT E V MG Sbjct: 835 VINAAFERFKGKLQYLEGVIDERNVNITLKNRAGAGVVKYELLK-----PTSEHGVTGMG 889 Query: 166 IPNSISI 146 +P SISI Sbjct: 890 VPYSISI 896
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 51.2 bits (121), Expect = 6e-07 Identities = 29/64 (45%), Positives = 38/64 (59%) Frame = -3 Query: 337 QAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPN 158 +AFE+F E ++I + +DE N+D KNR G +PY LL PS E V GIPN Sbjct: 801 EAFEKFGEKVKEIEKNIDERNDDETLKNRTGLVKMPYTLLFPS-----SEGGVTGRGIPN 855 Query: 157 SISI 146 S+SI Sbjct: 856 SVSI 859
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 50.4 bits (119), Expect = 1e-06 Identities = 29/71 (40%), Positives = 41/71 (57%) Frame = -3 Query: 358 TKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMV 179 T D V +AF+ F + +I E++ + NND +NR+G +PY LL PS E+ + Sbjct: 801 TTDSVPKEAFKRFGKKLAEIEEKLTQRNNDESLRNRYGPVKMPYTLLYPS-----SEEGL 855 Query: 178 MEMGIPNSISI 146 GIPNSISI Sbjct: 856 TCRGIPNSISI 866
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 48.5 bits (114), Expect = 4e-06 Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 2/73 (2%) Frame = -3 Query: 358 TKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEK-- 185 T D AF+ F I ++ + N + KNR+G +PY+LL P+ D T EK Sbjct: 805 TSDAKALDAFKRFGSRLVDIENRIKDMNGNSALKNRNGPVKMPYMLLYPNTSDVTKEKGQ 864 Query: 184 MVMEMGIPNSISI 146 + MGIPNSISI Sbjct: 865 GLTAMGIPNSISI 877
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 48.1 bits (113), Expect = 5e-06 Identities = 30/72 (41%), Positives = 36/72 (50%), Gaps = 1/72 (1%) Frame = -3 Query: 358 TKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGD-PTDEKM 182 T D +AF+ F +I +V N DP RKNR G PY LL P+ D D Sbjct: 799 TSDAKALEAFKRFGARLTEIESRVVAMNKDPHRKNRVGPTNFPYTLLYPNTSDLKGDAAG 858 Query: 181 VMEMGIPNSISI 146 + GIPNSISI Sbjct: 859 LSARGIPNSISI 870
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 46.6 bits (109), Expect = 1e-05 Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 1/72 (1%) Frame = -3 Query: 358 TKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKM- 182 T D + F+ F + +I +V N+DP+ KNR+G PY+LL P+ D Sbjct: 791 TSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAG 850 Query: 181 VMEMGIPNSISI 146 + GIPNSISI Sbjct: 851 LTAKGIPNSISI 862
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 46.2 bits (108), Expect = 2e-05 Identities = 30/72 (41%), Positives = 40/72 (55%), Gaps = 1/72 (1%) Frame = -3 Query: 358 TKDGVINQAFEEFKESTRKIVEQVDEWNNDPD-RKNRHGAGMVPYVLLRPSDGDPTDEKM 182 T D QAF++F ++I E++ NNDP + NR G +PY LL PS E+ Sbjct: 773 TSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPS-----SEEG 827 Query: 181 VMEMGIPNSISI 146 + GIPNSISI Sbjct: 828 LTFRGIPNSISI 839
>LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1.13.11.12)| Length = 924 Score = 46.2 bits (108), Expect = 2e-05 Identities = 26/69 (37%), Positives = 37/69 (53%) Frame = -3 Query: 352 DGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVME 173 D + A++ F ++I +D N D KNR GAG++PY L++ P + V Sbjct: 861 DAAVQAAYDGFAARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMK-----PFSDSGVTG 915 Query: 172 MGIPNSISI 146 MGIPNS SI Sbjct: 916 MGIPNSTSI 924
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 45.8 bits (107), Expect = 3e-05 Identities = 27/71 (38%), Positives = 40/71 (56%) Frame = -3 Query: 358 TKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMV 179 T D +AF++F +I +++ + NND +NRHG +PY LL PS ++ + Sbjct: 796 TSDKRALEAFKKFGNKLAEIEKKLTQRNNDEKLRNRHGPVEMPYTLLYPS-----SKEGL 850 Query: 178 MEMGIPNSISI 146 GIPNSISI Sbjct: 851 TFRGIPNSISI 861
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 45.8 bits (107), Expect = 3e-05 Identities = 28/71 (39%), Positives = 36/71 (50%) Frame = -3 Query: 358 TKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMV 179 T D QAF++F ++I E++ NND NR G +PY LL P+ T Sbjct: 801 TSDSKALQAFQKFGNKLKEIEEKLARKNNDQSLSNRLGPVQLPYTLLHPNSEGLTCR--- 857 Query: 178 MEMGIPNSISI 146 GIPNSISI Sbjct: 858 ---GIPNSISI 865
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 45.4 bits (106), Expect = 3e-05 Identities = 28/72 (38%), Positives = 36/72 (50%), Gaps = 1/72 (1%) Frame = -3 Query: 358 TKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKM- 182 T D +AF F + +I +V N D KNR+G PY+LL P+ D T Sbjct: 795 TSDARALEAFRRFSDRLVEIEGKVVGMNGDAGLKNRNGPAEFPYMLLYPNTSDVTGAAAG 854 Query: 181 VMEMGIPNSISI 146 + GIPNSISI Sbjct: 855 ITAKGIPNSISI 866
>LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precursor (EC| 1.13.11.12) Length = 941 Score = 45.1 bits (105), Expect = 4e-05 Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 1/70 (1%) Frame = -3 Query: 352 DGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRP-SDGDPTDEKMVM 176 D + A+ F ++I +D N D KNR GAG++PY L++P SD T Sbjct: 878 DAAVQAAYAGFTARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSDAGVTG----- 932 Query: 175 EMGIPNSISI 146 MGIPNS SI Sbjct: 933 -MGIPNSTSI 941
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 45.1 bits (105), Expect = 4e-05 Identities = 27/71 (38%), Positives = 39/71 (54%) Frame = -3 Query: 358 TKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMV 179 T D +AF+ F + +I +++ E N D +NR+G +PY LL PS E+ + Sbjct: 788 TSDAGPLEAFKRFGKKLEEIEKKLIEKNKDETLRNRYGPAKMPYTLLYPS-----SEEGL 842 Query: 178 MEMGIPNSISI 146 GIPNSISI Sbjct: 843 TFRGIPNSISI 853
>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)| Length = 918 Score = 44.7 bits (104), Expect = 6e-05 Identities = 29/71 (40%), Positives = 35/71 (49%) Frame = -3 Query: 358 TKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMV 179 T D A F R+ E ++ N D RKNR GAG++PY LL PS V Sbjct: 853 TADEAAVAAHGMFAADVRRAEETIERRNADHGRKNRCGAGVLPYELLAPS-----SPPGV 907 Query: 178 MEMGIPNSISI 146 G+PNSISI Sbjct: 908 TCRGVPNSISI 918
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 44.3 bits (103), Expect = 7e-05 Identities = 27/71 (38%), Positives = 37/71 (52%) Frame = -3 Query: 358 TKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMV 179 T D QAF++F +I ++ NNDP +R G +PY LL PS ++ + Sbjct: 799 TSDSKALQAFQKFGNKLAEIEAKLTNKNNDPSLYHRVGPVQLPYTLLHPS-----SKEGL 853 Query: 178 MEMGIPNSISI 146 GIPNSISI Sbjct: 854 TFRGIPNSISI 864
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 43.1 bits (100), Expect = 2e-04 Identities = 27/71 (38%), Positives = 37/71 (52%) Frame = -3 Query: 358 TKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMV 179 T D +AF+ F +I ++ E NND +NR G +PY LL PS ++ + Sbjct: 792 TSDTRALEAFKRFGNKLAQIENKLSERNNDEKLRNRCGPVQMPYTLLLPS-----SKEGL 846 Query: 178 MEMGIPNSISI 146 GIPNSISI Sbjct: 847 TFRGIPNSISI 857
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 43.1 bits (100), Expect = 2e-04 Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 4/68 (5%) Frame = -3 Query: 337 QAFEEFKESTRKIVE---QVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTD-EKMVMEM 170 +A E FK +R++VE +V N DP KNR G PY L+ P+ D + + Sbjct: 796 KALEAFKRFSRQLVEIESKVLNMNKDPLLKNRVGPANFPYTLMFPNTSDNKGAAEGITAR 855 Query: 169 GIPNSISI 146 GIPNSISI Sbjct: 856 GIPNSISI 863
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 42.4 bits (98), Expect = 3e-04 Identities = 23/64 (35%), Positives = 38/64 (59%) Frame = -3 Query: 337 QAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPN 158 QAF+ F + ++I E++ N D +NR+G +PY +L P+ +++ + GIPN Sbjct: 803 QAFKRFGQKLKEIEEKIMGRNKDSSLRNRNGPVKMPYTVLLPT----CEDEGLTFRGIPN 858 Query: 157 SISI 146 SISI Sbjct: 859 SISI 862
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 40.8 bits (94), Expect = 8e-04 Identities = 26/71 (36%), Positives = 36/71 (50%) Frame = -3 Query: 358 TKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMV 179 T D +AF+ F I +++ N+DP +NR G +PY LL S E+ + Sbjct: 799 TTDKKALEAFKRFGSKLTGIEGKINARNSDPSLRNRTGPVQLPYTLLHRS-----SEEGL 853 Query: 178 MEMGIPNSISI 146 GIPNSISI Sbjct: 854 TFKGIPNSISI 864
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 40.4 bits (93), Expect = 0.001 Identities = 28/71 (39%), Positives = 35/71 (49%) Frame = -3 Query: 358 TKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMV 179 TKD AFE F + I ++ N+ KNR G VPY LL PT E+ + Sbjct: 794 TKDKEPLVAFERFGKMLSDIENRIMIMNSHKSWKNRSGPVNVPYTLL-----FPTSEEGL 848 Query: 178 MEMGIPNSISI 146 GIPNS+SI Sbjct: 849 TGKGIPNSVSI 859
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 39.3 bits (90), Expect = 0.002 Identities = 27/71 (38%), Positives = 34/71 (47%) Frame = -3 Query: 358 TKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMV 179 TKD AF+ F + I +Q+ + N D NR G PY LL PT E + Sbjct: 796 TKDKEPLAAFDRFGKKLTDIEKQIIQRNGDNILTNRSGPVNAPYTLL-----FPTSEGGL 850 Query: 178 MEMGIPNSISI 146 GIPNS+SI Sbjct: 851 TGKGIPNSVSI 861
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 37.7 bits (86), Expect = 0.007 Identities = 27/71 (38%), Positives = 33/71 (46%) Frame = -3 Query: 358 TKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMV 179 TKD AFE F I +Q+ + N + NR G PY LL PT E + Sbjct: 795 TKDKEPLAAFERFGNKLTDIEKQIMQRNGNNILTNRTGPVNAPYTLL-----FPTSEGGL 849 Query: 178 MEMGIPNSISI 146 GIPNS+SI Sbjct: 850 TGKGIPNSVSI 860
>LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment)| Length = 741 Score = 35.8 bits (81), Expect = 0.026 Identities = 18/50 (36%), Positives = 28/50 (56%) Frame = -3 Query: 358 TKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPS 209 T D +AF+ F + +I +++ + NND +NR G +PY LL PS Sbjct: 682 TSDAGPLEAFKRFGKKLAEIEKKLVQKNNDETLRNRTGPAKMPYTLLYPS 731
>UREE_RHOS4 (Q3J156) Urease accessory protein ureE| Length = 182 Score = 31.6 bits (70), Expect = 0.50 Identities = 19/53 (35%), Positives = 25/53 (47%) Frame = -2 Query: 299 RGAGG*VEQRPRPEKPTRRRHGAVCAAQAVGR*SHGREDGDGDGHPQQHLHLS 141 RG G +E R P +P GA + +G HG G G HP H+H+S Sbjct: 120 RGLGLTLEPRTEPFRP---EGGAYGHGRTLGH-DHGPAQGHGHDHPHVHVHIS 168
>MUTS_STRT2 (Q5M6I1) DNA mismatch repair protein mutS| Length = 852 Score = 30.4 bits (67), Expect = 1.1 Identities = 12/41 (29%), Positives = 22/41 (53%) Frame = -3 Query: 358 TKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGM 236 T+ G+I F+E + RK++ + W D + K R +G+ Sbjct: 407 TEGGIIRDGFDETLDKYRKVMSEGTSWIADIEAKEREASGI 447
>MUTS_STRT1 (Q5M1Z0) DNA mismatch repair protein mutS| Length = 852 Score = 30.4 bits (67), Expect = 1.1 Identities = 12/41 (29%), Positives = 22/41 (53%) Frame = -3 Query: 358 TKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGM 236 T+ G+I F+E + RK++ + W D + K R +G+ Sbjct: 407 TEGGIIRDGFDETLDKYRKVMSEGTSWIADIEAKEREASGI 447
>CELR2_MOUSE (Q9R0M0) Cadherin EGF LAG seven-pass G-type receptor 2 precursor| (Flamingo 1) (mFmi1) Length = 2920 Score = 29.3 bits (64), Expect = 2.5 Identities = 13/39 (33%), Positives = 18/39 (46%) Frame = +3 Query: 231 GTMPAPCRFFRSGSLFHSSTCSTIFLVLSLNSSNAWLIT 347 G PCR SG S C+ + + ++SN WL T Sbjct: 31 GDQVGPCRSLGSGGRSSSGACAPVGWLCPASASNLWLYT 69
>ASPA_PROMM (Q7V5L6) Probable aspartoacylase (EC 3.5.1.15)| Length = 304 Score = 28.9 bits (63), Expect = 3.2 Identities = 9/22 (40%), Positives = 15/22 (68%) Frame = -3 Query: 289 VDEWNNDPDRKNRHGAGMVPYV 224 +D+W+ P+ N HG G+VP + Sbjct: 23 LDQWSQTPELINTHGVGVVPVI 44
>Y463_CHRVO (Q7P0V2) UPF0341 protein CV_0463| Length = 258 Score = 28.5 bits (62), Expect = 4.2 Identities = 16/35 (45%), Positives = 17/35 (48%) Frame = -2 Query: 266 RPEKPTRRRHGAVCAAQAVGR*SHGREDGDGDGHP 162 R E T +HGAV A G H RE G G G P Sbjct: 45 RLELLTTGKHGAVYAEFVEGAARHRREQGGGRGQP 79
>ACDE2_METTE (Q9C4Z3) Acetyl-CoA decarbonylase/synthase complex epsilon subunit| 2 (ACDS complex epsilon subunit 2) Length = 170 Score = 27.7 bits (60), Expect = 7.2 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = -3 Query: 82 WPGGGYNGNEHQIIIKGHDDIYI 14 WPG NGN II+ GH YI Sbjct: 99 WPGLDGNGNYDTIILLGHKKYYI 121
>DEFR7_MOUSE (P50715) Defensin-related cryptdin, related sequence 7 precursor| (Cryptdin-related protein 4C-2) (CRS4C) Length = 91 Score = 27.7 bits (60), Expect = 7.2 Identities = 12/22 (54%), Positives = 12/22 (54%) Frame = +1 Query: 271 RCSTHPPAPRSSWCSP*TPQMP 336 RC PP PR SWC P P P Sbjct: 64 RCPRCPPCPRCSWC-PRCPTCP 84
>TSGA_BUCAI (P57601) Protein tsgA homolog| Length = 388 Score = 27.3 bits (59), Expect = 9.4 Identities = 10/23 (43%), Positives = 16/23 (69%) Frame = -3 Query: 343 INQAFEEFKESTRKIVEQVDEWN 275 IN +FE+FK +T+ E ++WN Sbjct: 181 INSSFEKFKTNTKNSKETKEKWN 203
>EDG8_HUMAN (Q9H228) Sphingosine 1-phosphate receptor Edg-8 (Endothelial| differentiation sphingolipid G-protein-coupled receptor 8) (Sphingosine 1-phosphate receptor 5) (S1P5) Length = 398 Score = 27.3 bits (59), Expect = 9.4 Identities = 16/32 (50%), Positives = 19/32 (59%) Frame = +2 Query: 44 NLVLIPIIPTAGPRD*RHSYLRLVELHTHTQG 139 N +L PII T RD RH+ LRLV H+ G Sbjct: 298 NSLLNPIIYTLTNRDLRHALLRLVCCGRHSCG 329
>COAT_PAVHB (P07299) Probable coat protein VP1| Length = 781 Score = 27.3 bits (59), Expect = 9.4 Identities = 16/41 (39%), Positives = 19/41 (46%) Frame = -3 Query: 322 FKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGD 200 FK RK + WN P H AG +PYVL P+ D Sbjct: 719 FKLGPRKATGR---WNPQPGVYPPHAAGHLPYVLYDPTATD 756 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,621,695 Number of Sequences: 219361 Number of extensions: 1222663 Number of successful extensions: 3494 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 3342 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3469 length of database: 80,573,946 effective HSP length: 95 effective length of database: 59,734,651 effective search space used: 1433631624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
