>YLK2_CAEEL (P41950) Hypothetical protein D1044.2 precursor|
          Length = 1090

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
 Frame = +3

Query: 78   RVHTQAFSLF*PAEAEPSSFL-TSSSIPDA--SKESDVQVQQPA*TLHMEPSKPKRPN 242
            + HT   ++  P EA PS F+ T++  P A  + +  + VQQP+  ++ +P K +  N
Sbjct: 884  KAHTTTTTMMIPTEAPPSIFVFTTTQKPRAQSTTQKRIIVQQPSIVVNSQPPKQRNDN 941

>OPAA_NEIGO (Q04876) Opacity protein opA53 precursor (Fragment)|
          Length = 239

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 25/71 (35%), Positives = 35/71 (49%)
 Frame = +2

Query: 203 NSSHGTIQTQATKHNESDHYTHAQT*LGRYLLILIAETSIIHDTFSLPVSQRPPTNCNKS 382
           NSSH  I+TQ T+H E+  + HA + LG          S I+D F L    +P      +
Sbjct: 98  NSSHLNIKTQKTEHQENGTF-HATSSLG---------LSAIYD-FKLNDKFKPYIGVRVA 146

Query: 383 YGYGKGNVAAV 415
           YG+ K  V +V
Sbjct: 147 YGHVKHQVRSV 157

>MATN2_HUMAN (O00339) Matrilin-2 precursor|
          Length = 956

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
 Frame = +1

Query: 67   CTRDACIHR-----PSVFFNLQKQNHLRSSPPAPSPMQAKNQTCRCSNL 198
            C+  A  HR      ++  + QK +H  S+ P+ SP++ K+  C+C NL
Sbjct: 875  CSNFAVQHRYLFEEDNLLRSTQKLSH--STKPSGSPLEEKHDQCKCENL 921

>RS7_PYRKO (Q5JE04) 30S ribosomal protein S7P|
          Length = 215

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +1

Query: 4   LQKHLTFRFELQKHVKFRNRWCTRDACIHRPSV 102
           + K LT RF + K VK   RW   D  +  PS+
Sbjct: 1   MAKPLTERFFIPKEVKVMGRWSVEDVTVEDPSL 33

>GPMI2_METAC (Q8TIY2) 2,3-bisphosphoglycerate-independent phosphoglycerate|
           mutase 2 (EC 5.4.2.1) (Phosphoglyceromutase 2)
           (BPG-independent PGAM 2) (iPGM 2)
          Length = 521

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 19/80 (23%), Positives = 32/80 (40%)
 Frame = +2

Query: 29  LNCKNMLNLGTDGVQETRAYTGLQSFLTCRSRTIFVPHLQLHPRCKQRIRRAGAATCMNS 208
           LN  NM  +G  G+ E  A   +++  TC  R I            + +++AG    + +
Sbjct: 404 LNFANMDMVGHTGIFEA-AVQAVEAVDTCVGRII------------EALKKAGGVALITA 450

Query: 209 SHGTIQTQATKHNESDHYTH 268
            HG  +    +H    H  H
Sbjct: 451 DHGNAEQMENQHTGEPHTAH 470

>JHD3B_HUMAN (O94953) JmjC domain-containing histone demethylation protein 3B|
           (EC 1.14.11.-) (Jumonji domain-containing protein 2B)
          Length = 1096

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
 Frame = -1

Query: 137 ERRW-----FCFCRLKKTEGLCMHASLVHHLFLNLTCFCSSNLNVRC 12
           E+RW     +C  R+KK  G C+  S  H         CS++ +V C
Sbjct: 845 EQRWKLKCVYCRKRMKKVSGACIQCSYEH---------CSTSFHVTC 882

>CASR_BOVIN (P35384) Extracellular calcium-sensing receptor precursor (CaSR)|
            (Parathyroid Cell calcium-sensing receptor)
          Length = 1085

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 14/43 (32%), Positives = 17/43 (39%)
 Frame = +2

Query: 137  PHLQLHPRCKQRIRRAGAATCMNSSHGTIQTQATKHNESDHYT 265
            P  Q  PRCKQ++         + S    Q  A  H  S H T
Sbjct: 961  PQSQQPPRCKQKVIFGSGTVTFSLSFDEPQKTAVAHRNSTHQT 1003

>RS7_THECE (P29159) 30S ribosomal protein S7P|
          Length = 215

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = +1

Query: 4   LQKHLTFRFELQKHVKFRNRWCTRDACIHRPSV--FFNLQ 117
           + K LT RF   K +K   RW   D  ++ PS+  + NL+
Sbjct: 1   MAKTLTERFYQPKELKVMGRWSVEDVTVNDPSLRPYINLE 40


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,875,988
Number of Sequences: 219361
Number of extensions: 1329542
Number of successful extensions: 3242
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3241
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)