>Y568_RICPR (Q9ZCY3) Hypothetical protein RP568|
          Length = 129

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
 Frame = +2

Query: 182 SKFKFTHKVTTYNWGICSRFQQFHSENYMSRN*ANIF-------LSPSALVWLY*QFILK 340
           S F+   +V+T N+ + S  +Q +SEN    N  NI        L P+ L  L   ++  
Sbjct: 20  SLFRIKDRVSTLNYQLRSVIKQINSEN----NNINILKAEQAYLLLPTRLEKLAAAYLKL 75

Query: 341 EVVFKCEVVLDPLAP 385
           E+V   +++ DPLAP
Sbjct: 76  EIVKSYQMINDPLAP 90

>CNOT3_HUMAN (O75175) CCR4-NOT transcription complex subunit 3 (CCR4-associated|
           factor 3)
          Length = 753

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = -2

Query: 385 WCQRIKNDFTFEYNFLED 332
           W QR K  FTFEY +LED
Sbjct: 732 WGQRKKEGFTFEYRYLED 749

>CNOT3_MOUSE (Q8K0V4) CCR4-NOT transcription complex subunit 3 (CCR4-associated|
           factor 3)
          Length = 751

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = -2

Query: 385 WCQRIKNDFTFEYNFLED 332
           W QR K  FTFEY +LED
Sbjct: 730 WGQRKKEGFTFEYRYLED 747

>YZ2T_AGRVI (O34299) Hypothetical protein in TAR-II ttuC' 3'region (ORFZ2)|
           (Fragment)
          Length = 242

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +2

Query: 50  WGMPSSQFLGNLDLIQLKVQTEGIWI 127
           WG+ +S ++GNL L+ L +   G+W+
Sbjct: 97  WGIIASMWIGNLLLVILNLPLIGLWV 122

>DEMA_PONPY (Q5R4B6) Dematin (Erythrocyte membrane protein band 4.9)|
          Length = 405

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -1

Query: 125 SRCPQSEP*AELDPDFLETGNWACPMNLMIHSNKW 21
           S+ P ++P     P  +ET  W CP +L +   +W
Sbjct: 171 SKFPAAQPPDPNQPAKIETDYWPCPPSLAVVETEW 205

>DEMA_MOUSE (Q9WV69) Dematin (Erythrocyte membrane protein band 4.9)|
          Length = 405

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -1

Query: 125 SRCPQSEP*AELDPDFLETGNWACPMNLMIHSNKW 21
           S+ P ++P     P  +ET  W CP +L +   +W
Sbjct: 171 SKFPAAQPPDPNQPAKIETDYWPCPPSLAVVETEW 205

>DEMA_HUMAN (Q08495) Dematin (Erythrocyte membrane protein band 4.9)|
          Length = 405

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -1

Query: 125 SRCPQSEP*AELDPDFLETGNWACPMNLMIHSNKW 21
           S+ P ++P     P  +ET  W CP +L +   +W
Sbjct: 171 SKFPAAQPPDPNQPAKIETDYWPCPPSLAVVETEW 205

>YZ2R_AGRVI (P70795) Hypothetical 52.8 kDa protein in TAR-I ttuC' 3'region|
           (ORFZ2)
          Length = 502

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +2

Query: 50  WGMPSSQFLGNLDLIQLKVQTEGIWI 127
           WG+ +S ++GNL L+ L +   G+W+
Sbjct: 357 WGIIASMWIGNLLLVILNLPLIGLWV 382

>PPAY_CAEEL (Q10944) Putative acid phosphatase B0361.7 precursor (EC 3.1.3.2)|
          Length = 422

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -3

Query: 348 TTSLRMNCQYNQTRALGLRKMFAQ 277
           T  + MN Q+  T+A G+RK FA+
Sbjct: 154 TAEIEMNAQWKSTKANGIRKKFAR 177

>MTH_DROYA (Q9GT50) G-protein coupled receptor Mth precursor (Protein|
           methuselah)
          Length = 517

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 18/79 (22%), Positives = 32/79 (40%), Gaps = 3/79 (3%)
 Frame = +2

Query: 2   FQCCIKSIYLNVSSNSWGMPSSQFLGNLDLIQLKVQTEGIWI*FSLRFRLRARTSNAHNS 181
           +  C+   YL +  N W M  +  +    L    V    +W+           + +AHN+
Sbjct: 256 YMVCLFMAYLLLLLNLWQMSQNFCITAGFLGYFFVMAAFLWLSVISLHLWNTFSGSAHNA 315

Query: 182 SKFKFTHKVTTYN---WGI 229
           ++F   H+   YN   WG+
Sbjct: 316 NRFLSEHRFLAYNTYAWGM 334


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,709,358
Number of Sequences: 219361
Number of extensions: 850420
Number of successful extensions: 1677
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1677
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 1386249648
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)