ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl28g05 |
|---|---|
| Clone Library Name | barley_pub |
>MRP3_ARATH (Q9LK64) Multidrug resistance-associated protein 3 (EC 3.6.3.44)| (Glutathione S-conjugate transporting ATPase 3) (ATP-energized glutathione S-conjugate pump 3) Length = 1514 Score = 46.6 bits (109), Expect = 2e-05 Identities = 22/32 (68%), Positives = 26/32 (81%) Frame = -3 Query: 298 NGVAVERDTPAKLLENKSSLFSKLVAEYTMRA 203 NG+ E DTP +LLE+KSS FSKLVAEYT R+ Sbjct: 1478 NGIIEEYDTPVRLLEDKSSSFSKLVAEYTSRS 1509
>MRP7_ARATH (Q9LK62) Multidrug resistance-associated protein 7 (EC 3.6.3.44)| (Glutathione S-conjugate transporting ATPase 7) (ATP-energized glutathione S-conjugate pump 7) Length = 1493 Score = 42.4 bits (98), Expect = 3e-04 Identities = 20/28 (71%), Positives = 24/28 (85%) Frame = -3 Query: 295 GVAVERDTPAKLLENKSSLFSKLVAEYT 212 G+ E D+PA+LLE+KSS FSKLVAEYT Sbjct: 1451 GLIEEHDSPARLLEDKSSSFSKLVAEYT 1478
>MRP8_ARATH (Q8VZZ4) Multidrug resistance-associated protein 8 (EC 3.6.3.44)| (Glutathione S-conjugate transporting ATPase 8) (ATP-energized glutathione S-conjugate pump 8) Length = 1466 Score = 42.0 bits (97), Expect = 4e-04 Identities = 19/28 (67%), Positives = 24/28 (85%) Frame = -3 Query: 295 GVAVERDTPAKLLENKSSLFSKLVAEYT 212 G+ E D+PA+LLE++SSLFSK VAEYT Sbjct: 1429 GLIKEHDSPARLLEDRSSLFSKFVAEYT 1456
>MRP5_ARATH (Q7GB25) Multidrug resistance-associated protein 5 (EC 3.6.3.44)| (Glutathione S-conjugate transporting ATPase 5) (ATP-energized glutathione S-conjugate pump 5) Length = 1514 Score = 40.8 bits (94), Expect = 8e-04 Identities = 19/32 (59%), Positives = 25/32 (78%) Frame = -3 Query: 298 NGVAVERDTPAKLLENKSSLFSKLVAEYTMRA 203 +G E DTPA+LLE+KSS+F KLV EY+ R+ Sbjct: 1477 DGRVAEFDTPARLLEDKSSMFLKLVTEYSSRS 1508
>MRP9_ARATH (Q9M1C7) Multidrug resistance-associated protein 9 (EC 3.6.3.44)| (Glutathione S-conjugate transporting ATPase 9) (ATP-energized glutathione S-conjugate pump 9) Length = 1490 Score = 37.4 bits (85), Expect = 0.009 Identities = 16/32 (50%), Positives = 24/32 (75%) Frame = -3 Query: 298 NGVAVERDTPAKLLENKSSLFSKLVAEYTMRA 203 +G E D+PAKLL+ + S FSKL+ EY++R+ Sbjct: 1448 DGRIAEFDSPAKLLQREDSFFSKLIKEYSLRS 1479
>MRP15_ARATH (Q7FB56) Putative multidrug resistance-associated protein 15 (EC| 3.6.3.44) (Glutathione S-conjugate transporting ATPase 15) (ATP-energized glutathione S-conjugate pump 15) Length = 1037 Score = 37.4 bits (85), Expect = 0.009 Identities = 16/32 (50%), Positives = 24/32 (75%) Frame = -3 Query: 298 NGVAVERDTPAKLLENKSSLFSKLVAEYTMRA 203 +G E D+PAKLL+ + S FSKL+ EY++R+ Sbjct: 995 DGRIAEFDSPAKLLQREDSFFSKLIKEYSLRS 1026
>MRP14_ARATH (Q9LYS2) Multidrug resistance-associated protein 14 (EC 3.6.3.44)| (Glutathione S-conjugate transporting ATPase 14) (ATP-energized glutathione S-conjugate pump 14) Length = 1389 Score = 33.1 bits (74), Expect = 0.18 Identities = 15/28 (53%), Positives = 21/28 (75%) Frame = -3 Query: 298 NGVAVERDTPAKLLENKSSLFSKLVAEY 215 +G VE D P KL+++++SLF KLV EY Sbjct: 1352 DGRIVEYDEPMKLMKDENSLFGKLVKEY 1379
>MRP4_ARATH (Q7DM58) Multidrug resistance-associated protein 4 (EC 3.6.3.44)| (Glutathione S-conjugate transporting ATPase 4) (ATP-energized glutathione S-conjugate pump 4) Length = 1516 Score = 32.0 bits (71), Expect = 0.39 Identities = 17/31 (54%), Positives = 23/31 (74%) Frame = -3 Query: 295 GVAVERDTPAKLLENKSSLFSKLVAEYTMRA 203 G A E D+PA+LLE + SLF+ LV EY +R+ Sbjct: 1484 GKAKEFDSPARLLE-RPSLFAALVQEYALRS 1513
>MRP10_ARATH (Q9LZJ5) Multidrug resistance-associated protein 10 (EC 3.6.3.44)| (Glutathione S-conjugate transporting ATPase 10) (ATP-energized glutathione S-conjugate pump 10) Length = 1539 Score = 31.2 bits (69), Expect = 0.67 Identities = 16/31 (51%), Positives = 22/31 (70%) Frame = -3 Query: 295 GVAVERDTPAKLLENKSSLFSKLVAEYTMRA 203 G A E D+P +LLE + SLF+ LV EY +R+ Sbjct: 1507 GKAKEYDSPVRLLE-RQSLFAALVQEYALRS 1536
>NMDE2_HUMAN (Q13224) Glutamate [NMDA] receptor subunit epsilon 2 precursor| (N-methyl D-aspartate receptor subtype 2B) (NR2B) (NMDAR2B) (N-methyl-D-aspartate receptor subunit 3) (NR3) (hNR3) Length = 1484 Score = 30.0 bits (66), Expect = 1.5 Identities = 18/59 (30%), Positives = 32/59 (54%) Frame = +2 Query: 8 FFSFILQNM*SYRASISSTNTVVDREYFTSHLPVIFRHYRRPDSFRKPQRHGRMPGGST 184 FF+ I + SY A++++ ++ EY + + ++RP+ F P R G +P GST Sbjct: 637 FFAVIF--LASYTANLAAF--MIQEEYVDQVSGLSDKKFQRPNDFSPPFRFGTVPNGST 691
>NMDE2_RAT (Q00960) Glutamate [NMDA] receptor subunit epsilon 2 precursor| (N-methyl D-aspartate receptor subtype 2B) (NR2B) (NMDAR2B) Length = 1482 Score = 30.0 bits (66), Expect = 1.5 Identities = 18/59 (30%), Positives = 32/59 (54%) Frame = +2 Query: 8 FFSFILQNM*SYRASISSTNTVVDREYFTSHLPVIFRHYRRPDSFRKPQRHGRMPGGST 184 FF+ I + SY A++++ ++ EY + + ++RP+ F P R G +P GST Sbjct: 637 FFAVIF--LASYTANLAAF--MIQEEYVDQVSGLSDKKFQRPNDFSPPFRFGTVPNGST 691
>NMDE2_MOUSE (Q01097) Glutamate [NMDA] receptor subunit epsilon 2 precursor| (N-methyl D-aspartate receptor subtype 2B) (NR2B) (NMDAR2B) Length = 1482 Score = 30.0 bits (66), Expect = 1.5 Identities = 18/59 (30%), Positives = 32/59 (54%) Frame = +2 Query: 8 FFSFILQNM*SYRASISSTNTVVDREYFTSHLPVIFRHYRRPDSFRKPQRHGRMPGGST 184 FF+ I + SY A++++ ++ EY + + ++RP+ F P R G +P GST Sbjct: 637 FFAVIF--LASYTANLAAF--MIQEEYVDQVSGLSDKKFQRPNDFSPPFRFGTVPNGST 691
>YAWB_SCHPO (Q10185) Probable ATP-dependent permease C3F10.11c| Length = 1478 Score = 30.0 bits (66), Expect = 1.5 Identities = 15/27 (55%), Positives = 18/27 (66%) Frame = -3 Query: 298 NGVAVERDTPAKLLENKSSLFSKLVAE 218 +G VE D+ KLLENK+SLF L E Sbjct: 1448 HGKVVEFDSTKKLLENKASLFYSLAKE 1474
>EXO70_KLULA (Q6CK11) Exocyst complex protein EXO70| Length = 619 Score = 29.3 bits (64), Expect = 2.5 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Frame = +2 Query: 11 FSFILQNM*SYRASISSTNTVVDREYFTSHLPVIFRHYRR-PDSFRKPQRH 160 F ++ SYR S + ++ +E + LP+ R Y R DSF+ P++H Sbjct: 552 FEDLVSRSKSYRISDPALKKILRQEILSLVLPMYERFYNRYKDSFKHPRKH 602
>VGLG_EHV4 (P32650) Glycoprotein G precursor| Length = 405 Score = 28.9 bits (63), Expect = 3.3 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = +3 Query: 126 DGQTHSGSLNGMEECLEDLLVGYVCVALI 212 D T G L+G+++C L Y+C+ALI Sbjct: 371 DSITTGGVLHGLQDCDNQLKTVYICLALI 399
>MRP6_ARATH (Q8LGU1) Multidrug resistance-associated protein 6 precursor (EC| 3.6.3.44) (Glutathione S-conjugate transporting ATPase 6) (ATP-energized glutathione S-conjugate pump 6) Length = 1295 Score = 28.9 bits (63), Expect = 3.3 Identities = 16/27 (59%), Positives = 19/27 (70%) Frame = -3 Query: 295 GVAVERDTPAKLLENKSSLFSKLVAEY 215 G VE + P+KL+E S FSKLVAEY Sbjct: 1256 GDLVEYNEPSKLMET-DSYFSKLVAEY 1281
>CTPB_MYCLE (P46840) Cation-transporting P-type ATPase B (EC 3.6.3.-)| Length = 750 Score = 28.5 bits (62), Expect = 4.3 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = +2 Query: 236 EERRFVLQQLGWRVTLHGHTVVEEQD 313 +E R V++Q G+R T H + VEE D Sbjct: 66 DELRQVIEQAGYRATAHAESAVEEID 91
>YH85_SCHPO (Q9P5N0) Probable ATP-dependent permease C359.05| Length = 1465 Score = 28.5 bits (62), Expect = 4.3 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = -3 Query: 298 NGVAVERDTPAKLLENKSSLFSKLVAE 218 +G VE D KLLENK S+F L E Sbjct: 1435 HGKVVEFDATKKLLENKDSMFYSLAKE 1461
>VGLX_EHV1K (P32514) Glycoprotein GX precursor| Length = 411 Score = 28.5 bits (62), Expect = 4.3 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%) Frame = +3 Query: 126 DGQTHSGSL-NGMEECLEDLLVGYVCVALI 212 D TH+G NG+++C L Y C+ALI Sbjct: 338 DDSTHTGGASNGIQDCDSQLKTVYACLALI 367
>VGLG_EHV1V (P84393) Glycoprotein G precursor| Length = 411 Score = 28.5 bits (62), Expect = 4.3 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%) Frame = +3 Query: 126 DGQTHSGSL-NGMEECLEDLLVGYVCVALI 212 D TH+G NG+++C L Y C+ALI Sbjct: 338 DDSTHTGGASNGIQDCDSQLKTVYACLALI 367
>VGLG_EHV1B (P28967) Glycoprotein G precursor| Length = 411 Score = 28.5 bits (62), Expect = 4.3 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%) Frame = +3 Query: 126 DGQTHSGSL-NGMEECLEDLLVGYVCVALI 212 D TH+G NG+++C L Y C+ALI Sbjct: 338 DDSTHTGGASNGIQDCDSQLKTVYACLALI 367
>POLG_RHDVF (P27410) Genome polyprotein (p254) [Contains: p16; p23; Helicase| (2C-like protein) (P2C); 3A-like protein; Viral genome-linked protein (VPg); Thiol protease P3C (EC 3.4.22.-); RNA-directed RNA polymerase (EC 2.7.7.48); Capsid protein VP60, sub Length = 2344 Score = 28.1 bits (61), Expect = 5.7 Identities = 12/33 (36%), Positives = 20/33 (60%) Frame = +2 Query: 239 ERRFVLQQLGWRVTLHGHTVVEEQDHVAVKDRG 337 ++ +L+QL W T H V+EE +A ++RG Sbjct: 1669 DKSSILRQLEWSKTTSRHMVIEETYDLAKEERG 1701
>POLG_RHDV3 (P27411) Genome polyprotein (p254) [Contains: p16; p23; Helicase| (2C-like protein) (P2C); 3A-like protein; Viral genome-linked protein (VPg); Thiol protease P3C (EC 3.4.22.-); RNA-directed RNA polymerase (EC 2.7.7.48); Capsid protein VP60, sub Length = 2344 Score = 28.1 bits (61), Expect = 5.7 Identities = 12/33 (36%), Positives = 20/33 (60%) Frame = +2 Query: 239 ERRFVLQQLGWRVTLHGHTVVEEQDHVAVKDRG 337 ++ +L+QL W T H V+EE +A ++RG Sbjct: 1669 DKSSILRQLEWSKTTSRHMVIEETYDLAKEERG 1701
>CREA_ASPOR (Q9P889) DNA-binding protein creA (Carbon catabolite repressor)| Length = 429 Score = 28.1 bits (61), Expect = 5.7 Identities = 17/48 (35%), Positives = 21/48 (43%) Frame = -2 Query: 338 HLGP*QRHGLAPRQRCGRGA*HASQAAGEQIVSLLKARSRVHDESDAY 195 H GP H A R GRG S A +S +RS H++ D Y Sbjct: 240 HAGPRNHHLFASRHHTGRGLPSLSAYA----ISHSMSRSHSHEDEDGY 283
>VTF3S_VARV (P33834) Intermediate transcription factor 3 small subunit (VITF-3| 32 kDa subunit) Length = 288 Score = 27.7 bits (60), Expect = 7.4 Identities = 11/25 (44%), Positives = 19/25 (76%) Frame = -3 Query: 292 VAVERDTPAKLLENKSSLFSKLVAE 218 +AVE + P KLL++++ LF+K + E Sbjct: 242 LAVESELPIKLLKDRNELFTKFINE 266
>VTF3S_VACCC (P20986) Intermediate transcription factor 3 small subunit (VITF-3| 32 kDa subunit) Length = 288 Score = 27.7 bits (60), Expect = 7.4 Identities = 11/25 (44%), Positives = 19/25 (76%) Frame = -3 Query: 292 VAVERDTPAKLLENKSSLFSKLVAE 218 +AVE + P KLL++++ LF+K + E Sbjct: 242 LAVESELPIKLLKDRNELFTKFINE 266
>BNC2_MOUSE (Q8BMQ3) Zinc finger protein basonuclin-2| Length = 1127 Score = 27.7 bits (60), Expect = 7.4 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = -3 Query: 91 EVLSIYHGVGATNTRTVTSHVLKDKAEKVV 2 EVL I HG+G T V ++L+D A KV+ Sbjct: 229 EVLHILHGLGWTLRDYVRGYILQDAAGKVL 258
>CT174_HUMAN (Q5JPB2) Protein C20orf174| Length = 1082 Score = 27.7 bits (60), Expect = 7.4 Identities = 15/42 (35%), Positives = 18/42 (42%) Frame = +1 Query: 205 LSSCTLLRALRRETICSPAAWLACHAPRPHRCRGARPCRCQG 330 L SC LRA R T W+ + P G +PCR G Sbjct: 703 LQSCVQLRASRLRT----PTWVRRRSRHPPALEGLKPCRTPG 740
>BNC2_HUMAN (Q6ZN30) Zinc finger protein basonuclin-2| Length = 1099 Score = 27.7 bits (60), Expect = 7.4 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = -3 Query: 91 EVLSIYHGVGATNTRTVTSHVLKDKAEKVV 2 EVL I HG+G T V ++L+D A KV+ Sbjct: 201 EVLHILHGLGWTLRDYVRGYILQDAAGKVL 230
>STAT1_CAEEL (Q9NAD6) Signal transducer and activator of transcription 1| Length = 706 Score = 27.3 bits (59), Expect = 9.7 Identities = 11/37 (29%), Positives = 21/37 (56%) Frame = +1 Query: 85 VLHITSTSNFSALSTARLIQEASTAWKNAWRIYSLAM 195 V+ + +NF+ + +LI E +WKNA ++ + M Sbjct: 89 VIKLNDGTNFATMLQTQLIGEKLFSWKNAQKLAQIGM 125
>DPOG1_DROME (Q27607) DNA polymerase gamma subunit 1, mitochondrial precursor| (EC 2.7.7.7) (Mitochondrial DNA polymerase catalytic subunit) (Protein tamas) Length = 1145 Score = 27.3 bits (59), Expect = 9.7 Identities = 12/39 (30%), Positives = 19/39 (48%) Frame = +2 Query: 74 VDREYFTSHLPVIFRHYRRPDSFRKPQRHGRMPGGSTRW 190 V RE++ S IFR + P KP++ + G T + Sbjct: 13 VSREHYASSSVKIFRRVKPPQKVNKPKKPENVENGPTEY 51 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,211,809 Number of Sequences: 219361 Number of extensions: 873139 Number of successful extensions: 2750 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 2668 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2748 length of database: 80,573,946 effective HSP length: 88 effective length of database: 61,270,178 effective search space used: 1470484272 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
