ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl28g04 |
|---|---|
| Clone Library Name | barley_pub |
>CY24B_HUMAN (P04839) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)| (Neutrophil cytochrome b 91 kDa polypeptide) (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane glycoprotein gp91phox) (Cytochrome b(558) beta chain) (Cytochrome b558 be Length = 569 Score = 35.0 bits (79), Expect = 0.070 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Frame = -1 Query: 417 KRVAVNHENQRVGVFYCGGPVLVPQL--RQLSADFTHKTNTKFEFHKENF 274 K +A H N R+GVF CG L L + +S + F F+KENF Sbjct: 520 KTIASQHPNTRIGVFLCGPEALAETLSKQSISNSESGPRGVHFIFNKENF 569
>NOX3_MOUSE (Q672J9) NADPH oxidase 3 (EC 1.6.3.-)| Length = 568 Score = 34.7 bits (78), Expect = 0.092 Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 2/50 (4%) Frame = -1 Query: 417 KRVAVNHENQRVGVFYCGGPVLVPQLRQLSADFT--HKTNTKFEFHKENF 274 K++A NH + +GVF+CG + L+++ ++ F ++KENF Sbjct: 519 KQIAYNHPSSSIGVFFCGSKAMSKTLQKMCRLYSSVDPRGVHFYYNKENF 568
>NOX1_RAT (Q9WV87) NADPH oxidase homolog 1 (NOX-1) (NOH-1) (NADH/NADPH| mitogenic oxidase subunit P65-MOX) (Mitogenic oxidase 1) (MOX1) Length = 563 Score = 34.3 bits (77), Expect = 0.12 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%) Frame = -1 Query: 414 RVAVNHENQRVGVFYCGGPVLVPQLRQLSADFT--HKTNTKFEFHKENF 274 R+A H VGVF CG P L LR+ ++ +F F+KE F Sbjct: 515 RIATAHPKSVVGVFLCGPPTLAKSLRKCCRRYSSLDPRKVQFYFNKETF 563
>NOX3_RAT (Q672K1) NADPH oxidase 3 (EC 1.6.3.-)| Length = 568 Score = 34.3 bits (77), Expect = 0.12 Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 2/50 (4%) Frame = -1 Query: 417 KRVAVNHENQRVGVFYCGGPVLVPQLRQLSADFTHK--TNTKFEFHKENF 274 K++A NH + +GVF+CG + L+++ ++ F ++KENF Sbjct: 519 KQIAYNHPSSSIGVFFCGPKAMSKTLQKMCRLYSSSDPRGVHFYYNKENF 568
>CY24B_BOVIN (O46522) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)| (Neutrophil cytochrome b 91 kDa polypeptide) (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane glycoprotein gp91phox) (Cytochrome b(558) beta chain) (Cytochrome b558 be Length = 570 Score = 33.5 bits (75), Expect = 0.20 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Frame = -1 Query: 417 KRVAVNHENQRVGVFYCGGPVLVPQLRQ--LSADFTHKTNTKFEFHKENF 274 K + H N R+GVF CG L L + +S + F F+KENF Sbjct: 521 KTIGSQHPNTRIGVFLCGPEALADTLNKQCISNSDSGPRGVHFIFNKENF 570
>CY24B_BISBI (Q95L74) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)| (Neutrophil cytochrome b 91 kDa polypeptide) (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane glycoprotein gp91phox) (Cytochrome b(558) beta chain) (Cytochrome b558 be Length = 570 Score = 33.5 bits (75), Expect = 0.20 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Frame = -1 Query: 417 KRVAVNHENQRVGVFYCGGPVLVPQLRQ--LSADFTHKTNTKFEFHKENF 274 K + H N R+GVF CG L L + +S + F F+KENF Sbjct: 521 KTIGSQHPNTRIGVFLCGPEALADTLNKQCISNSDSGPRGVHFIFNKENF 570
>SPY1_HUMAN (O43609) Sprouty homolog 1 (Spry-1)| Length = 319 Score = 33.1 bits (74), Expect = 0.27 Identities = 19/55 (34%), Positives = 23/55 (41%) Frame = -2 Query: 356 FLCRSCGSCRQISPTRQTQSLSFTRRTSSSVACIRICLCHASSGELYGLYYYFVK 192 F+C CG C+ + R S +AC R CLC A S YG VK Sbjct: 179 FICEQCGKCK-------CGECTAPRTLPSCLACNRQCLCSAESMVEYGTCMCLVK 226
>CY24B_PIG (P52649) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)| (Neutrophil cytochrome b 91 kDa polypeptide) (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane glycoprotein gp91phox) (Cytochrome b(558) beta chain) (Cytochrome b558 beta Length = 484 Score = 33.1 bits (74), Expect = 0.27 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Frame = -1 Query: 417 KRVAVNHENQRVGVFYCGGPVLVPQLRQ--LSADFTHKTNTKFEFHKENF 274 K +A H R+GVF CG L L + +S + F F+KENF Sbjct: 435 KTIASQHPTTRIGVFLCGPEALAETLNKQCISNSDSSPRGVHFIFNKENF 484
>SPY1_MOUSE (Q9QXV9) Sprouty homolog 1 (Spry-1)| Length = 313 Score = 33.1 bits (74), Expect = 0.27 Identities = 19/55 (34%), Positives = 23/55 (41%) Frame = -2 Query: 356 FLCRSCGSCRQISPTRQTQSLSFTRRTSSSVACIRICLCHASSGELYGLYYYFVK 192 F+C CG C+ + R S +AC R CLC A S YG VK Sbjct: 173 FICEQCGKCK-------CGECTAPRALPSCLACDRQCLCSAESMVEYGTCMCLVK 220
>CY24B_MOUSE (Q61093) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)| (Neutrophil cytochrome b 91 kDa polypeptide) (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane glycoprotein gp91phox) (Cytochrome b(558) beta chain) (Cytochrome b558 be Length = 570 Score = 32.7 bits (73), Expect = 0.35 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Frame = -1 Query: 417 KRVAVNHENQRVGVFYCGGPVLVPQL--RQLSADFTHKTNTKFEFHKENF 274 K +A H N +GVF CG L L + +S + F F+KENF Sbjct: 521 KTIASEHPNTTIGVFLCGPEALAETLSKQSISNSESGPRGVHFIFNKENF 570
>NOX3_HUMAN (Q9HBY0) NADPH oxidase 3 (EC 1.6.3.-) (gp91phox homolog 3) (GP91-3)| (Mitogenic oxidase 2) Length = 568 Score = 32.3 bits (72), Expect = 0.45 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 5/53 (9%) Frame = -1 Query: 417 KRVAVNHENQRVGVFYCGGPVLVPQLRQL-----SADFTHKTNTKFEFHKENF 274 K++A NH + +GVF+CG L L+++ SAD F ++KE+F Sbjct: 519 KQIAYNHPSSSIGVFFCGPKALSRTLQKMCHLYSSAD---PRGVHFYYNKESF 568
>NOX1_HUMAN (Q9Y5S8) NADPH oxidase homolog 1 (NOX-1) (NOH-1) (NADH/NADPH| mitogenic oxidase subunit P65-MOX) (Mitogenic oxidase 1) (MOX1) Length = 564 Score = 32.0 bits (71), Expect = 0.59 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Frame = -1 Query: 411 VAVNHENQRVGVFYCGGPVLVPQLRQLSADFT--HKTNTKFEFHKENF 274 +A +H VGVF CG L LR+ ++ +F F+KENF Sbjct: 517 IATSHPKSVVGVFLCGPRTLAKSLRKCCHRYSSLDPRKVQFYFNKENF 564
>DUOX1_PIG (Q8HZK3) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-)| Length = 1553 Score = 30.4 bits (67), Expect = 1.7 Identities = 13/44 (29%), Positives = 22/44 (50%) Frame = -1 Query: 405 VNHENQRVGVFYCGGPVLVPQLRQLSADFTHKTNTKFEFHKENF 274 V+ + +++GVF CG P + + + + T F H ENF Sbjct: 1510 VHPQVRKIGVFSCGPPGMTKNVEKACQLINRQDRTHFSHHYENF 1553
>HUT1_SCHPO (Q8WZJ9) UDP-galactose transporter homolog 1| Length = 322 Score = 30.4 bits (67), Expect = 1.7 Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 3/97 (3%) Frame = -2 Query: 413 VSRSTMRISVS-GFSIVVGLFLCRSCGSCRQISPTRQTQSLSFTRRTSSSVACIRICLCH 237 +S TM I+V+ G + + GL+L ISP Q LSF R S + + + C Sbjct: 194 LSSVTMMIAVNLGIACLNGLYL---------ISPFCNQQPLSFINRHPSILKDMLLFACT 244 Query: 236 ASSGELYGLYYYFVKVGN--KMGVVLPSPVFSLVYSM 132 S G+L+ +++ K G+ + + L +F+++ S+ Sbjct: 245 GSVGQLF-IFFTLEKFGSITLVTITLTRKIFTMLLSV 280
>DUOX1_HUMAN (Q9NRD9) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-) (NADPH| thyroid oxidase 1) (Thyroid oxidase 1) (Large NOX 1) (Long NOX 1) Length = 1551 Score = 30.4 bits (67), Expect = 1.7 Identities = 13/44 (29%), Positives = 22/44 (50%) Frame = -1 Query: 405 VNHENQRVGVFYCGGPVLVPQLRQLSADFTHKTNTKFEFHKENF 274 V+ + +++GVF CG P + + + + T F H ENF Sbjct: 1508 VHPQVRKIGVFSCGPPGMTKNVEKACQLINRQDRTHFSHHYENF 1551
>DUOX1_CANFA (Q9MZF4) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-) (NADPH| thyroid oxidase 1) (Thyroid oxidase 1) Length = 1551 Score = 30.4 bits (67), Expect = 1.7 Identities = 13/44 (29%), Positives = 22/44 (50%) Frame = -1 Query: 405 VNHENQRVGVFYCGGPVLVPQLRQLSADFTHKTNTKFEFHKENF 274 V+ + +++GVF CG P + + + + T F H ENF Sbjct: 1508 VHPQVRKIGVFSCGPPGMTKNVEKACQLINRQDRTHFSHHYENF 1551
>DUOX1_RAT (Q8CIY2) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-)| Length = 1551 Score = 30.0 bits (66), Expect = 2.3 Identities = 13/44 (29%), Positives = 22/44 (50%) Frame = -1 Query: 405 VNHENQRVGVFYCGGPVLVPQLRQLSADFTHKTNTKFEFHKENF 274 V+ + +++GVF CG P + + + + T F H ENF Sbjct: 1508 VHPQVRKIGVFSCGPPGMTKNVEKACQLINKQDRTHFSHHYENF 1551
>DUOX2_PIG (Q8HZK2) Dual oxidase 2 precursor (EC 1.6.3.1) (EC 1.11.1.-)| (NADH/NADPH thyroid oxidase p138-tox) Length = 1545 Score = 29.6 bits (65), Expect = 2.9 Identities = 13/44 (29%), Positives = 22/44 (50%) Frame = -1 Query: 405 VNHENQRVGVFYCGGPVLVPQLRQLSADFTHKTNTKFEFHKENF 274 V+ + +++GVF CG P + + + + T F H ENF Sbjct: 1502 VHPQVRKIGVFSCGPPGMTKNVEKTCQLINRQDQTHFVHHYENF 1545
>ENO_SCHJA (P33676) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 434 Score = 29.6 bits (65), Expect = 2.9 Identities = 12/46 (26%), Positives = 26/46 (56%), Gaps = 1/46 (2%) Frame = -2 Query: 275 SSSVACIRICLCHASSGEL-YGLYYYFVKVGNKMGVVLPSPVFSLV 141 ++++ + + +C A + EL LY Y K+ V++P P F+++ Sbjct: 108 ANAILGVSLAVCKAGAAELNLPLYRYIAKLAGHKDVIMPVPAFNVI 153
>TXND8_MOUSE (Q69AB2) Thioredoxin domain-containing protein 8| (Spermatid-specific thioredoxin-3) (Sptrx-3) (Thioredoxin-6) Length = 127 Score = 29.6 bits (65), Expect = 2.9 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = -2 Query: 389 SVSGFSIVVGLFLCRSCGSCRQISPTRQTQSLSFTRRTSSSV 264 S +G +VV F + CG C+ I+P Q SL + T + V Sbjct: 16 SDAGNKLVVVEFSAKWCGPCKTIAPVFQAMSLKYQNVTFAQV 57
>SP3AE_BACSU (P49782) Stage III sporulation protein AE| Length = 405 Score = 29.3 bits (64), Expect = 3.8 Identities = 13/29 (44%), Positives = 20/29 (68%) Frame = -1 Query: 132 VVKEYISVLGLGILFGYASFPCIQVLRLA 46 ++K + +LG+ IL A+FP I+VL LA Sbjct: 310 LLKNTVGILGVAILICIAAFPAIKVLSLA 338
>SPY3_HUMAN (O43610) Sprouty homolog 3 (Spry-3)| Length = 288 Score = 29.3 bits (64), Expect = 3.8 Identities = 19/56 (33%), Positives = 23/56 (41%) Frame = -2 Query: 359 LFLCRSCGSCRQISPTRQTQSLSFTRRTSSSVACIRICLCHASSGELYGLYYYFVK 192 LF+C CG C+ + T R S C + CLC A S YG VK Sbjct: 144 LFICEECGRCKCVPCTA-------ARPLPSCWLCNQRCLCSAESLLDYGTCLCCVK 192
>TRI32_HUMAN (Q13049) Tripartite motif protein 32 (EC 6.3.2.-) (Zinc-finger| protein HT2A) (72 kDa Tat-interacting protein) Length = 653 Score = 28.1 bits (61), Expect = 8.6 Identities = 11/19 (57%), Positives = 13/19 (68%) Frame = -2 Query: 392 ISVSGFSIVVGLFLCRSCG 336 I +G S VGL +CRSCG Sbjct: 86 IDTAGLSEAVGLLMCRSCG 104
>TXND8_RAT (Q69AB1) Thioredoxin domain-containing protein 8| (Spermatid-specific thioredoxin-3) (Sptrx-3) Length = 127 Score = 28.1 bits (61), Expect = 8.6 Identities = 12/35 (34%), Positives = 19/35 (54%) Frame = -2 Query: 392 ISVSGFSIVVGLFLCRSCGSCRQISPTRQTQSLSF 288 + +G +VV F + CG C+ I+P Q SL + Sbjct: 15 LGAAGNRLVVVEFSAQWCGPCKMIAPAFQAMSLQY 49
>CTAA_BACSU (P12946) Cytochrome aa3-controlling protein| Length = 306 Score = 28.1 bits (61), Expect = 8.6 Identities = 12/43 (27%), Positives = 25/43 (58%) Frame = -2 Query: 293 SFTRRTSSSVACIRICLCHASSGELYGLYYYFVKVGNKMGVVL 165 ++ R T SS+AC + LC + L ++ +V++G++ +L Sbjct: 180 AYVRHTESSLACPNVPLCSPLNNGLPTQFHEWVQMGHRAAALL 222 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,697,848 Number of Sequences: 219361 Number of extensions: 1140214 Number of successful extensions: 2565 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 2521 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2562 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2228238148 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
