ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl28f12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GLGB_PHOPR (Q6LHN1) 1,4-alpha-glucan branching enzyme (EC 2.4.1.... 30 2.2
2WRK19_ARATH (Q9SZ67) Probable WRKY transcription factor 19 (WRKY... 30 2.9

>GLGB_PHOPR (Q6LHN1) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Glycogen|
           branching enzyme) (BE)
           (1,4-alpha-D-glucan:1,4-alpha-D-glucan
           6-glucosyl-transferase)
          Length = 716

 Score = 30.0 bits (66), Expect = 2.2
 Identities = 13/36 (36%), Positives = 24/36 (66%)
 Frame = +2

Query: 128 AYLHDL*NENVAKLLISSATFLAHLYNIQGLKLNPV 235
           +Y++D   ++V + LIS+A F    Y+I GL+++ V
Sbjct: 361 SYIYDYGRDHVRRFLISNALFWLEHYHIDGLRVDAV 396



to top

>WRK19_ARATH (Q9SZ67) Probable WRKY transcription factor 19 (WRKY DNA-binding|
            protein 19)
          Length = 1895

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
 Frame = +1

Query: 46   LSSKSHLALIFLCLYKKKHLQKQNQPACL-----PA*SVK*KCCQTLDLER 183
            L +  HL  +   +YK KHL+  N   C+     P  S + KC + LDL R
Sbjct: 1379 LENSRHLKNLPTSIYKLKHLETLNLSGCISLERFPDSSRRMKCLRFLDLSR 1429


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,415,348
Number of Sequences: 219361
Number of extensions: 849161
Number of successful extensions: 1442
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1437
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1442
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2169600302
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top