Clone Name | rbastl28f09 |
---|---|
Clone Library Name | barley_pub |
>UBC3_ARATH (P42746) Ubiquitin-conjugating enzyme E2-17 kDa 3 (EC 6.3.2.19)| (Ubiquitin-protein ligase 3) (Ubiquitin carrier protein 3) Length = 150 Score = 32.7 bits (73), Expect = 0.22 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%) Frame = +1 Query: 283 PPLG--GLVQPHQLQHWDQWQMGPVDAPWD 366 PP+G G Q + + HW+ GP D PWD Sbjct: 20 PPVGISGAPQDNNIMHWNALIFGPEDTPWD 49
>LIGE_PSEPA (P27457) Beta-etherase (Beta-aryl ether cleaving enzyme)| Length = 280 Score = 28.5 bits (62), Expect = 4.2 Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Frame = +1 Query: 199 PLITDN*ETLFRSWAVSNSYDQAAAVDKPPL-GGLVQPHQLQHWDQWQMGPVDAPW 363 P+I D+ E + SW ++ D+ D+P L G Q + ++ D W PW Sbjct: 59 PVIVDDGEWVLDSWVIAEYLDEKYP-DRPMLFEGPTQKNLMKFLDNWLWSTAVGPW 113
>COAT_NODAV (P12871) Protein alpha [Contains: Coat protein beta (EC 3.4.23.44)| (Nodavirus endopeptidase); Coat protein gamma] Length = 399 Score = 28.1 bits (61), Expect = 5.4 Identities = 13/43 (30%), Positives = 23/43 (53%) Frame = +2 Query: 206 LQIIKKHCLEVGLSPIHMTKLLLLISPRLGAWCSHTNSNIGTN 334 L + KKHCL ++ + +LL++P G C +N+G + Sbjct: 83 LVLPKKHCLTQSITFTPGKQTMLLVAPIPGIACLKAEANVGAS 125
>ANR21_HUMAN (Q86YR6) Ankyrin repeat domain-containing protein 21 (Protein POTE)| (Prostate, ovary, testis expressed protein) Length = 584 Score = 28.1 bits (61), Expect = 5.4 Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 8/45 (17%) Frame = +2 Query: 236 VGLSPIHMTKLLLLISPRLGAWCSH--------TNSNIGTNGRWD 346 VG S H + ++ ++G WC H + SN+G G +D Sbjct: 80 VGTSGDHENSFMKMLRSKMGKWCCHCFPCCRGSSKSNVGAWGDYD 124
>POT15_HUMAN (Q6S5H4) Prostate, ovary, testis expressed protein on chromosome 15| Length = 581 Score = 27.7 bits (60), Expect = 7.1 Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 8/45 (17%) Frame = +2 Query: 236 VGLSPIHMTKLLLLISPRLGAWCSHT--------NSNIGTNGRWD 346 VG S H + + ++G WC H SN+GT G +D Sbjct: 80 VGTSGDHDNSFMKTLRSKMGKWCCHCFPCCRGSGKSNVGTWGDYD 124
>AGI_URTDI (P11218) Lectin/endochitinase precursor (EC 3.2.1.14) (Agglutinin)| (UDA) Length = 372 Score = 27.7 bits (60), Expect = 7.1 Identities = 12/36 (33%), Positives = 13/36 (36%) Frame = -1 Query: 359 GASTGPICHWSQCWSWCGCTRPPSGGLSTAAAWSYE 252 G T P W WCG + P G WS E Sbjct: 31 GGGTCPALWCCSIWGWCGDSEPYCGRTCENKCWSGE 66
>POT14_HUMAN (Q6S5H5) Prostate, ovary, testis expressed protein on chromosome 14| Length = 594 Score = 27.3 bits (59), Expect = 9.3 Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 8/45 (17%) Frame = +2 Query: 236 VGLSPIHMTKLLLLISPRLGAWCSHT--------NSNIGTNGRWD 346 VG S H + + ++G WC H SN+GT+G D Sbjct: 43 VGTSGDHDDSAMKTLRSKMGKWCRHCFPWCRGSGKSNVGTSGDHD 87
>POT22_HUMAN (Q6S545) Prostate, ovary, testis expressed protein on chromosome 22| Length = 288 Score = 27.3 bits (59), Expect = 9.3 Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 8/45 (17%) Frame = +2 Query: 236 VGLSPIHMTKLLLLISPRLGAWCSHT--------NSNIGTNGRWD 346 VG S H + + ++G WC H SN+GT+G D Sbjct: 80 VGTSGDHDDSAMKTLRSKMGKWCCHCFPCCRGSGKSNVGTSGDHD 124 Score = 27.3 bits (59), Expect = 9.3 Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 8/45 (17%) Frame = +2 Query: 236 VGLSPIHMTKLLLLISPRLGAWCSHT--------NSNIGTNGRWD 346 VG S H + + ++G WC H SN+GT+G D Sbjct: 43 VGTSGDHDDSAMKTLRSKMGKWCCHCFPWCRGSGKSNVGTSGDHD 87
>CUT20_SCHPO (O42839) 20S cyclosome/APC complex protein cut20 (Cell untimely| torn protein 20) Length = 719 Score = 27.3 bits (59), Expect = 9.3 Identities = 9/19 (47%), Positives = 13/19 (68%) Frame = -3 Query: 345 SHLPLVPMLELVWLHQAPK 289 SHLP +P+ +WLH+ K Sbjct: 668 SHLPFIPLNSCLWLHEFEK 686
>GLGB_MYCPA (Q73X75) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Glycogen| branching enzyme) (BE) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase) Length = 731 Score = 27.3 bits (59), Expect = 9.3 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Frame = -1 Query: 371 STSHGASTGPICHWSQCWSWCGCTRPPS-GGLSTAAAWS 258 +T+H ++ G + + SW G TRP + GGL + W+ Sbjct: 450 ATAHKSAPGIVTIAEESTSWPGVTRPTNLGGLGFSMKWN 488 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,463,815 Number of Sequences: 219361 Number of extensions: 974829 Number of successful extensions: 2236 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 2202 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2236 length of database: 80,573,946 effective HSP length: 99 effective length of database: 58,857,207 effective search space used: 1412572968 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)