>emb|AL449104.5| Human DNA sequence from clone RP1-173P22 on chromosome 6 Contains the
             3' end of the HCRTR2 gene for hypocretin (orexin) receptor
             2, complete sequence
          Length = 120466

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 279   tgtcagaatagagttctgaaat 300
             ||||||||||||||||||||||
Sbjct: 44089 tgtcagaatagagttctgaaat 44068

>gb|AY062031.1| Homo sapiens hypocretin receptor 2 (HCRTR2) gene, complete cds
          Length = 168575

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 279   tgtcagaatagagttctgaaat 300
             ||||||||||||||||||||||
Sbjct: 78686 tgtcagaatagagttctgaaat 78665

>gb|AC108914.8| Mus musculus chromosome 1, clone RP23-435E15, complete sequence
          Length = 212494

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 224    cacaaaaagaacatgaaggat 244
              |||||||||||||||||||||
Sbjct: 143485 cacaaaaagaacatgaaggat 143505

>gb|AE017352.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 12, complete
              sequence
          Length = 906719

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 222    gccacaaaaagaacatgaaggattt 246
              ||||||||||| |||||||||||||
Sbjct: 626306 gccacaaaaagtacatgaaggattt 626282

>gb|AC158556.9| Mus musculus chromosome 15, clone RP23-140F20, complete sequence
          Length = 203053

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 272   tatcacgtgtcagaatagagt 292
             |||||||||||||||||||||
Sbjct: 95034 tatcacgtgtcagaatagagt 95014

>ref|XM_568118.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
           (CNL05850) partial mRNA
          Length = 2111

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 222 gccacaaaaagaacatgaaggattt 246
           ||||||||||| |||||||||||||
Sbjct: 876 gccacaaaaagtacatgaaggattt 900

>gb|AC005608.1| Homo sapiens chromosome 5, PAC clone 53L17 (LBNL H152), complete
             sequence
          Length = 119298

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 91    agaaagcatacaaccatgtc 110
             ||||||||||||||||||||
Sbjct: 53837 agaaagcatacaaccatgtc 53818

>gb|DQ415921.1| Cleome spinosa clone BAC Cs2, complete sequence
          Length = 132380

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 354   ccatttgccaaccatttata 373
             ||||||||||||||||||||
Sbjct: 23157 ccatttgccaaccatttata 23138

>gb|AC122539.4| Mus musculus BAC clone RP24-550H10 from chromosome 10, complete
           sequence
          Length = 146242

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 228 aaaagaacatgaaggatttc 247
           ||||||||||||||||||||
Sbjct: 489 aaaagaacatgaaggatttc 508

>gb|AC121961.2| Mus musculus BAC clone RP24-255E8 from 10, complete sequence
          Length = 162752

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 228    aaaagaacatgaaggatttc 247
              ||||||||||||||||||||
Sbjct: 162513 aaaagaacatgaaggatttc 162532

>emb|BX511117.4| Mouse DNA sequence from clone RP23-143C1 on chromosome 11 Contains a
             basic transcription factor 3 (Btf3) pseudogene, complete
             sequence
          Length = 72981

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 292   ttctgaaataactgtcacat 311
             ||||||||||||||||||||
Sbjct: 37888 ttctgaaataactgtcacat 37869

>emb|BX601644.6| Zebrafish DNA sequence from clone DKEY-21O13 in linkage group 9,
             complete sequence
          Length = 217065

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 279   tgtcagaatagagttctgaa 298
             ||||||||||||||||||||
Sbjct: 45659 tgtcagaatagagttctgaa 45678

>gb|AC109448.3| Homo sapiens chromosome 5 clone RP11-141G2, complete sequence
          Length = 163817

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 91    agaaagcatacaaccatgtc 110
             ||||||||||||||||||||
Sbjct: 52756 agaaagcatacaaccatgtc 52737

>gb|AC019196.10| Homo sapiens BAC clone RP11-356G6 from 2, complete sequence
          Length = 175504

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 283    agaatagagttctgaaataa 302
              ||||||||||||||||||||
Sbjct: 122513 agaatagagttctgaaataa 122532

>gb|CP000084.1| Candidatus Pelagibacter ubique HTCC1062, complete genome
          Length = 1308759

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 227   aaaaagaacatgaaggattt 246
             ||||||||||||||||||||
Sbjct: 26502 aaaaagaacatgaaggattt 26483

>emb|BX470256.11| Zebrafish DNA sequence from clone CH211-279A3 in linkage group 20,
              complete sequence
          Length = 172236

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 309    catgaagaccttaatcttta 328
              ||||||||||||||||||||
Sbjct: 162442 catgaagaccttaatcttta 162423

>gb|AC118596.7| Mus musculus chromosome 1, clone RP24-199M24, complete sequence
          Length = 149611

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 224   cacaaaaagaacatgaagga 243
             ||||||||||||||||||||
Sbjct: 61530 cacaaaaagaacatgaagga 61549


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,783,670
Number of Sequences: 3902068
Number of extensions: 3783670
Number of successful extensions: 64610
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64571
Number of HSP's gapped (non-prelim): 39
length of query: 440
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 418
effective length of database: 17,147,199,772
effective search space: 7167529504696
effective search space used: 7167529504696
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)