>dbj|D13472.2|BLYINOPP Hordeum vulgare mRNA for vacuolar membrane proton-translocating
            inorganic pyrophosphatase, complete cds
          Length = 2649

 Score =  363 bits (183), Expect = 3e-97
 Identities = 210/215 (97%), Gaps = 3/215 (1%)
 Strand = Plus / Minus

                                                                        
Query: 234  caatcatcatgatatcattgttcaagggtgggttcaaacattatcgtcgtcatcatggga 293
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2649 caatcatcatgatatcattgttcaagggtgggttcaaacattatcgtcgtcatcatggga 2590

                                                                        
Query: 294  cgaggaaaatttgccaggcacataccaacgagggaggacatctggtctctctcttctact 353
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2589 cgaggaaaatttgccagacacataccaacgagggaggacatctggtctctctcttctact 2530

                                                                        
Query: 354  acatggagctacaagccggtaatgtaatggtgagactaacataacgccttcaagaggcca 413
            ||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 2529 acatggagctacaagcc-gtaatgtaat-gtgagactaacataacg-cttcaagaggcca 2473

                                               
Query: 414  ggggaaaggggggtaggtaaccgcggcaatcctgg 448
            ||||||||||||||||||||| |||||||||||||
Sbjct: 2472 ggggaaaggggggtaggtaactgcggcaatcctgg 2438

>gb|AY296911.1| Triticum aestivum vacuolar proton-inorganic pyrophosphatase mRNA,
            complete cds
          Length = 2671

 Score =  167 bits (84), Expect = 4e-38
 Identities = 110/118 (93%), Gaps = 3/118 (2%)
 Strand = Plus / Minus

                                                                        
Query: 263  gggttcaaacattatcgtcgtcatcatgggacgaggaaaatttgccaggcacatacc--- 319
            |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||   
Sbjct: 2617 gggttcaaacattatcgtcgtcatcacgggacgaggaaaatttgccagacacataccaat 2558

                                                                      
Query: 320  aacgagggaggacatctggtctctctcttctactacatggagctacaagccggtaatg 377
            || ||  |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2557 aatgaccgaggacatctggtctctctcttctactacatggagctacaagccggtaatg 2500

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 46/46 (100%)
 Strand = Plus / Minus

                                                             
Query: 265     gttcaaacattatcgtcgtcatcatgggacgaggaaaatttgccag 310
               ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3935071 gttcaaacattatcgtcgtcatcatgggacgaggaaaatttgccag 3935026

>dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0035I03
          Length = 153749

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 46/46 (100%)
 Strand = Plus / Minus

                                                           
Query: 265   gttcaaacattatcgtcgtcatcatgggacgaggaaaatttgccag 310
             ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40947 gttcaaacattatcgtcgtcatcatgggacgaggaaaatttgccag 40902

>dbj|AK066933.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091F19, full
            insert sequence
          Length = 2738

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 46/46 (100%)
 Strand = Plus / Minus

                                                          
Query: 265  gttcaaacattatcgtcgtcatcatgggacgaggaaaatttgccag 310
            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2692 gttcaaacattatcgtcgtcatcatgggacgaggaaaatttgccag 2647

>dbj|AB012766.1| Oryza sativa gene for ovp2, complete cds
          Length = 5985

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 46/46 (100%)
 Strand = Plus / Minus

                                                          
Query: 265  gttcaaacattatcgtcgtcatcatgggacgaggaaaatttgccag 310
            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5951 gttcaaacattatcgtcgtcatcatgggacgaggaaaatttgccag 5906

>dbj|D45384.1| Oryza sativa mRNA for vacuolar H+-pyrophosphatase, complete cds
          Length = 2710

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 46/46 (100%)
 Strand = Plus / Minus

                                                          
Query: 265  gttcaaacattatcgtcgtcatcatgggacgaggaaaatttgccag 310
            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2677 gttcaaacattatcgtcgtcatcatgggacgaggaaaatttgccag 2632

>gb|AC009847.9| Drosophila melanogaster clone BACR03L10, complete sequence
          Length = 180498

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 30     ttacatagatcaaattttgtg 50
              |||||||||||||||||||||
Sbjct: 150218 ttacatagatcaaattttgtg 150198

>emb|BX957342.5| Zebrafish DNA sequence from clone CH211-120P12 in linkage group 13,
              complete sequence
          Length = 182888

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 336    tggtctctctcttctactaca 356
              |||||||||||||||||||||
Sbjct: 109831 tggtctctctcttctactaca 109851

>gb|AC023946.5| Homo sapiens chromosome 11, clone RP11-567I13, complete sequence
          Length = 187380

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 59    agcaaagcagctctgttgctt 79
             |||||||||||||||||||||
Sbjct: 98946 agcaaagcagctctgttgctt 98966

>emb|BX296552.9| Zebrafish DNA sequence from clone CH211-247P22, complete sequence
          Length = 171208

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 62     aaagcagctctgttgcttgca 82
              |||||||||||||||||||||
Sbjct: 139557 aaagcagctctgttgcttgca 139537

>gb|AC007054.24|AC007054 Drosophila melanogaster, chromosome 2R, region 41E-41E, BAC clone
              BACR45O18, complete sequence
          Length = 176510

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 30     ttacatagatcaaattttgtg 50
              |||||||||||||||||||||
Sbjct: 161312 ttacatagatcaaattttgtg 161332

>gb|AC104031.6| Homo sapiens chromosome 11, clone RP11-483L5, complete sequence
          Length = 212779

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 59     agcaaagcagctctgttgctt 79
              |||||||||||||||||||||
Sbjct: 209881 agcaaagcagctctgttgctt 209901

>gb|AE003785.4| Drosophila melanogaster chromosome 2R, section 4 of 73 of the complete
              sequence
          Length = 301132

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 30     ttacatagatcaaattttgtg 50
              |||||||||||||||||||||
Sbjct: 182744 ttacatagatcaaattttgtg 182764

>gb|AE000512.1| Thermotoga maritima MSB8, complete genome
          Length = 1860725

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 203    gatgagaatttagcacaggtg 223
              |||||||||||||||||||||
Sbjct: 397018 gatgagaatttagcacaggtg 396998

>gb|AC118193.9| Mus musculus chromosome 8, clone RP23-241A10, complete sequence
          Length = 222682

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 181    tagatgaacaagcaagaactaaga 204
              ||||||| ||||||||||||||||
Sbjct: 133407 tagatgagcaagcaagaactaaga 133384

>gb|AC114649.9| Mus musculus chromosome 5, clone RP24-150M14, complete sequence
          Length = 154765

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 339    tctctctcttctactacatg 358
              ||||||||||||||||||||
Sbjct: 137646 tctctctcttctactacatg 137627

>gb|AC146132.3| Pan troglodytes BAC clone RP43-23H13 from 7, complete sequence
          Length = 164355

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 402   ttcaagaggccaggggaaag 421
             ||||||||||||||||||||
Sbjct: 84354 ttcaagaggccaggggaaag 84335

>gb|AC105947.11| Mus musculus chromosome 18, clone RP24-66N1, complete sequence
          Length = 207139

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 340    ctctctcttctactacatgg 359
              ||||||||||||||||||||
Sbjct: 166627 ctctctcttctactacatgg 166608

>gb|AC122243.3| Mus musculus BAC clone RP23-148C10 from chromosome 17, complete sequence
          Length = 204584

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 28     tcttacatagatcaaatttt 47
              ||||||||||||||||||||
Sbjct: 185132 tcttacatagatcaaatttt 185113

>gb|AC140316.3| Mus musculus BAC clone RP23-419L10 from chromosome 18, complete sequence
          Length = 195911

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 340    ctctctcttctactacatgg 359
              ||||||||||||||||||||
Sbjct: 178571 ctctctcttctactacatgg 178590

>ref|XM_808881.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053506661.50) partial mRNA
          Length = 2991

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 286  tcatgggacgaggaaaattt 305
            ||||||||||||||||||||
Sbjct: 1392 tcatgggacgaggaaaattt 1411

>gb|AC072039.19| Homo sapiens 3 BAC RP11-305O4 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 154964

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 334    tctggtctctctcttctact 353
              ||||||||||||||||||||
Sbjct: 108378 tctggtctctctcttctact 108359

>ref|XM_812966.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053511245.110) partial mRNA
          Length = 2988

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 286  tcatgggacgaggaaaattt 305
            ||||||||||||||||||||
Sbjct: 1392 tcatgggacgaggaaaattt 1411

>gb|AC142299.1| Pan troglodytes BAC clone RP43-121O18 from 7, complete sequence
          Length = 146878

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 402    ttcaagaggccaggggaaag 421
              ||||||||||||||||||||
Sbjct: 105556 ttcaagaggccaggggaaag 105575

>emb|AL035692.10|HS329N18 Human DNA sequence from clone RP3-329N18 on chromosome 6q22.1-22.33,
             complete sequence
          Length = 84764

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 334   tctggtctctctcttctact 353
             ||||||||||||||||||||
Sbjct: 50835 tctggtctctctcttctact 50816

>gb|AC165360.3| Mus musculus BAC clone RP23-110L20 from chromosome 17, complete sequence
          Length = 217732

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 28     tcttacatagatcaaatttt 47
              ||||||||||||||||||||
Sbjct: 133140 tcttacatagatcaaatttt 133159


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,049,864
Number of Sequences: 3902068
Number of extensions: 4049864
Number of successful extensions: 71831
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71758
Number of HSP's gapped (non-prelim): 71
length of query: 453
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 431
effective length of database: 17,147,199,772
effective search space: 7390443101732
effective search space used: 7390443101732
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)