Clone Name | rbastl28d09 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | AOR_PYRAB (Q9V035) Tungsten-containing aldehyde ferredoxin oxido... | 29 | 5.7 | 2 | AOR_PYRHO (O58778) Tungsten-containing aldehyde ferredoxin oxido... | 28 | 7.4 | 3 | ABDA_DROME (P29555) Homeobox protein abdominal-A | 28 | 7.4 |
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>AOR_PYRAB (Q9V035) Tungsten-containing aldehyde ferredoxin oxidoreductase (EC| 1.2.7.5) Length = 607 Score = 28.9 bits (63), Expect = 5.7 Identities = 15/54 (27%), Positives = 30/54 (55%) Frame = -1 Query: 430 QASFEAVSSSILIQCQRCFSSPVKCGITLFAVHL*ELKL*EPMF*RSWAVHVNI 269 + S EA+++ LI+ + CF+ P+ CG + + E + P + +WA+ N+ Sbjct: 271 EQSGEAMAAKYLIRNKPCFACPIGCGRVNYLPSIGETE--GPEYESTWALGANL 322
>AOR_PYRHO (O58778) Tungsten-containing aldehyde ferredoxin oxidoreductase (EC| 1.2.7.5) Length = 607 Score = 28.5 bits (62), Expect = 7.4 Identities = 14/54 (25%), Positives = 30/54 (55%) Frame = -1 Query: 430 QASFEAVSSSILIQCQRCFSSPVKCGITLFAVHL*ELKL*EPMF*RSWAVHVNI 269 + S EA+++ L++ + CF+ P+ CG + + E + P + +WA+ N+ Sbjct: 271 EQSGEAMAAKYLVRNKPCFACPIGCGRVNYLPSIGETE--GPEYESTWALGANL 322
>ABDA_DROME (P29555) Homeobox protein abdominal-A| Length = 590 Score = 28.5 bits (62), Expect = 7.4 Identities = 22/73 (30%), Positives = 35/73 (47%) Frame = -2 Query: 300 SDEAGQSTSTLSHWAFGCFEYTHEGMNLSGEWGSFASISDSLQADVPATAFYSELAA**H 121 + +AG S+ + S A G H +N + + AS S S + V A A + AA Sbjct: 195 NSQAGDSSCSPSPSASGSSSL-HRSLNDNSPGSASASASASAASSVAAAAAAAAAAASSS 253 Query: 120 FAVSSPKCPPFIS 82 FA+ + K P++S Sbjct: 254 FAIPTSKMYPYVS 266 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,338,055 Number of Sequences: 219361 Number of extensions: 1235416 Number of successful extensions: 2315 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 2273 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2314 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2511994855 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)