Clone Name | rbastl28d08 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_142158.1| Drosophila melanogaster CG6966-RA (CG6966), mRNA Length = 2734 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 tagtacaagtacatacaatat 95 ||||||||||||||||||||| Sbjct: 2491 tagtacaagtacatacaatat 2471
>gb|AY084101.1| Drosophila melanogaster AT05246 full insert cDNA Length = 1281 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 tagtacaagtacatacaatat 95 ||||||||||||||||||||| Sbjct: 1020 tagtacaagtacatacaatat 1000
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 atgcttgcatcgctggcgttt 397 ||||||||||||||||||||| Sbjct: 32752717 atgcttgcatcgctggcgttt 32752737
>gb|AC009457.8|AC009457 Drosophila melanogaster, chromosome 3R, region 88E-88E, BAC clone BACR25A06, complete sequence Length = 170163 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 75 tagtacaagtacatacaatat 95 ||||||||||||||||||||| Sbjct: 106568 tagtacaagtacatacaatat 106588
>dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0490D09 Length = 154430 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 atgcttgcatcgctggcgttt 397 ||||||||||||||||||||| Sbjct: 115512 atgcttgcatcgctggcgttt 115532
>dbj|AK101217.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033031C11, full insert sequence Length = 3122 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 atgcttgcatcgctggcgttt 397 ||||||||||||||||||||| Sbjct: 2820 atgcttgcatcgctggcgttt 2800
>gb|AY111400.1| Zea mays CL3532_1 mRNA sequence Length = 1393 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 194 cttcctatttacagataggat 214 ||||||||||||||||||||| Sbjct: 83 cttcctatttacagataggat 103
>gb|AE003707.2| Drosophila melanogaster chromosome 3R, section 45 of 118 of the complete sequence Length = 228284 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 75 tagtacaagtacatacaatat 95 ||||||||||||||||||||| Sbjct: 112409 tagtacaagtacatacaatat 112429
>gb|BT001887.1| Drosophila melanogaster SD14914 full insert cDNA Length = 3444 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 tagtacaagtacatacaatat 95 ||||||||||||||||||||| Sbjct: 3182 tagtacaagtacatacaatat 3162
>gb|AY489416.1| Neodrepanis coruscans FMNH 8049 beta-fibrinogen gene, intron 7 Length = 850 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 tgtctagtacaagtacatac 90 |||||||||||||||||||| Sbjct: 20 tgtctagtacaagtacatac 1
>gb|AC122270.4| Mus musculus BAC clone RP23-220N16 from 17, complete sequence Length = 196395 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 ttcacaggatcacaggatcc 62 |||||||||||||||||||| Sbjct: 79204 ttcacaggatcacaggatcc 79223
>gb|AC098880.4| Mus musculus BAC clone RP23-121O1 from 17, complete sequence Length = 218299 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 ttcacaggatcacaggatcc 62 |||||||||||||||||||| Sbjct: 212580 ttcacaggatcacaggatcc 212599
>gb|AC158144.13| Mus musculus chromosome 7, clone RP23-82N3, complete sequence Length = 213341 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 ttcacaggatcacaggatcc 62 |||||||||||||||||||| Sbjct: 166929 ttcacaggatcacaggatcc 166910
>gb|AY395617.1| Lanius collurio voucher NRM 986403 fibrinogen gene, intron 7 Length = 918 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 tgtctagtacaagtacatac 90 |||||||||||||||||||| Sbjct: 25 tgtctagtacaagtacatac 6
>gb|AC093555.2| Homo sapiens chromosome 3 clone RP11-30A19, complete sequence Length = 163790 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 ccatctcttattctaagtat 149 |||||||||||||||||||| Sbjct: 79538 ccatctcttattctaagtat 79557
>gb|AY827403.1| Criniger bres beta-fibrinogen (beta-fibrinogen) gene, intron 7 and partial cds Length = 967 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 tgtctagtacaagtacatac 90 |||||||||||||||||||| Sbjct: 904 tgtctagtacaagtacatac 923
>emb|CR956631.17| M.truncatula DNA sequence from clone MTH2-65L9 on chromosome 3, complete sequence Length = 126227 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 264 aacctcaatccctcaatataccaa 287 |||||| ||||||||||||||||| Sbjct: 65538 aacctccatccctcaatataccaa 65561 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,008,021 Number of Sequences: 3902068 Number of extensions: 3008021 Number of successful extensions: 53433 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 17 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 53385 Number of HSP's gapped (non-prelim): 48 length of query: 413 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 391 effective length of database: 17,147,199,772 effective search space: 6704555110852 effective search space used: 6704555110852 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)