Clone Name | rbastl28c03 |
---|---|
Clone Library Name | barley_pub |
>emb|AL844885.4| Mouse DNA sequence from clone RP23-226E14 on chromosome 2, complete sequence Length = 129810 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 acatctctcaataattcataa 25 ||||||||||||||||||||| Sbjct: 38561 acatctctcaataattcataa 38541
>gb|AC138260.7| Mus musculus chromosome 6, clone RP23-247I19, complete sequence Length = 197686 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 agactaaggatctcttggag 146 |||||||||||||||||||| Sbjct: 19118 agactaaggatctcttggag 19137
>gb|AC114643.9| Mus musculus chromosome 6, clone RP24-127D6, complete sequence Length = 215696 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 agactaaggatctcttggag 146 |||||||||||||||||||| Sbjct: 60099 agactaaggatctcttggag 60080
>emb|AL359292.12| Human DNA sequence from clone RP3-448K1 on chromosome 6 Contains the 5' end of the AIM1 gene for absent in melanoma 1 and two CpG islands, complete sequence Length = 53905 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 ccacacccagcctcaaactg 204 |||||||||||||||||||| Sbjct: 13691 ccacacccagcctcaaactg 13710
>dbj|AB088749.1| Aulopus japonicus DNA, 5S ribosomal RNA, nontranscribed spacer, partial sequence, clone:M_2_7_004 Length = 766 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 aataattcataaattggtgt 33 |||||||||||||||||||| Sbjct: 112 aataattcataaattggtgt 93
>dbj|AB088748.1| Aulopus japonicus DNA, 5S ribosomal RNA, nontranscribed spacer, partial sequence, clone:M_2_4_010 Length = 790 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 aataattcataaattggtgt 33 |||||||||||||||||||| Sbjct: 115 aataattcataaattggtgt 96
>dbj|AB088736.1| Aulopus japonicus DNA, nontranscribed spacer, partial sequence, clone:M_2_23_020 Length = 669 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 aataattcataaattggtgt 33 |||||||||||||||||||| Sbjct: 74 aataattcataaattggtgt 55
>dbj|AB088735.1| Aulopus japonicus DNA, 5S ribosomal RNA, nontranscribed spacer, partial sequence, clone:M_2_1_001 Length = 755 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 aataattcataaattggtgt 33 |||||||||||||||||||| Sbjct: 108 aataattcataaattggtgt 89
>gb|AC084165.1|AC084165 Arabidopsis thaliana chromosome 1 BAC F3C3 genomic sequence, complete sequence Length = 90132 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 cataatgtttcactacaaac 179 |||||||||||||||||||| Sbjct: 52753 cataatgtttcactacaaac 52734 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,007,375 Number of Sequences: 3902068 Number of extensions: 3007375 Number of successful extensions: 50437 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 50427 Number of HSP's gapped (non-prelim): 10 length of query: 365 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 343 effective length of database: 17,147,199,772 effective search space: 5881489521796 effective search space used: 5881489521796 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)