Clone Name | rbastl28c01 |
---|---|
Clone Library Name | barley_pub |
>OR2T6_HUMAN (Q8NHC8) Olfactory receptor 2T6 (OST703)| Length = 309 Score = 30.4 bits (67), Expect = 1.1 Identities = 17/49 (34%), Positives = 22/49 (44%) Frame = -2 Query: 209 TRHCPRPAPHQGTNDFICF*PQTIPFVCSRSRTFSSVNIDVCAALVLIP 63 T P A HQ N F C P + C T+ +V C A++LIP Sbjct: 164 TMSLPFCASHQ-INHFFCEAPTMLRLACGDKTTYETVMYVCCVAMLLIP 211
>DBX1_MOUSE (P52950) Homeobox protein DBX1| Length = 335 Score = 28.5 bits (62), Expect = 4.2 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = -1 Query: 360 RSPGDE*EPVPGDRV*DHRPSPPRQVI 280 + PGDE E PG R+ H P+ PR ++ Sbjct: 271 KGPGDEEEDNPGARLAYHAPADPRHLL 297
>IF2_EHRRW (Q5HB61) Translation initiation factor IF-2| Length = 856 Score = 28.1 bits (61), Expect = 5.5 Identities = 11/34 (32%), Positives = 24/34 (70%) Frame = +3 Query: 237 RRTTRSVILRVSKQILLAEEVTVYDLRHGLQEQV 338 R T RSV ++++++L+ ++TV +L + + E+V Sbjct: 262 RVTNRSVKNKITRKVLIPNKITVQELANSMSERV 295
>IF2_EHRRG (Q5FGX3) Translation initiation factor IF-2| Length = 856 Score = 28.1 bits (61), Expect = 5.5 Identities = 11/34 (32%), Positives = 24/34 (70%) Frame = +3 Query: 237 RRTTRSVILRVSKQILLAEEVTVYDLRHGLQEQV 338 R T RSV ++++++L+ ++TV +L + + E+V Sbjct: 262 RVTNRSVKNKITRKVLIPNKITVQELANSMSERV 295
>ARGR1_STRP8 (Q7CMZ7) Arginine repressor 1| Length = 157 Score = 27.7 bits (60), Expect = 7.2 Identities = 12/25 (48%), Positives = 19/25 (76%) Frame = +1 Query: 67 IRTNAAQTSIFTEENVLERLQTNGI 141 IR+ ++T+I T++ + ERLQ NGI Sbjct: 11 IRSLISETTIHTQQELQERLQKNGI 35
>ARGR1_STRP6 (Q5XAY0) Arginine repressor 1| Length = 157 Score = 27.7 bits (60), Expect = 7.2 Identities = 12/25 (48%), Positives = 19/25 (76%) Frame = +1 Query: 67 IRTNAAQTSIFTEENVLERLQTNGI 141 IR+ ++T+I T++ + ERLQ NGI Sbjct: 11 IRSLISETTIHTQQELQERLQKNGI 35
>ARGR1_STRP3 (Q7CEX2) Arginine repressor 1| Length = 157 Score = 27.7 bits (60), Expect = 7.2 Identities = 12/25 (48%), Positives = 19/25 (76%) Frame = +1 Query: 67 IRTNAAQTSIFTEENVLERLQTNGI 141 IR+ ++T+I T++ + ERLQ NGI Sbjct: 11 IRSLISETTIHTQQELQERLQKNGI 35
>ARGR1_STRP1 (Q99YT5) Arginine repressor 1| Length = 157 Score = 27.7 bits (60), Expect = 7.2 Identities = 12/25 (48%), Positives = 19/25 (76%) Frame = +1 Query: 67 IRTNAAQTSIFTEENVLERLQTNGI 141 IR+ ++T+I T++ + ERLQ NGI Sbjct: 11 IRSLISETTIHTQQELQERLQKNGI 35
>DDLB_BRUME (Q8YI63) D-alanine--D-alanine ligase B (EC 6.3.2.4)| (D-alanylalanine synthetase B) (D-Ala-D-Ala ligase B) Length = 315 Score = 27.3 bits (59), Expect = 9.4 Identities = 15/46 (32%), Positives = 23/46 (50%) Frame = +3 Query: 186 SWSGAVPCETYLQQTGYRRTTRSVILRVSKQILLAEEVTVYDLRHG 323 S S V C T L++ GYR T V V+ ++ + V++ HG Sbjct: 27 SLSSGVACATTLEECGYRVTRIDVDRNVASILVELKPDVVFNALHG 72
>DDLB_BRUSU (Q8FZP5) D-alanine--D-alanine ligase B (EC 6.3.2.4)| (D-alanylalanine synthetase B) (D-Ala-D-Ala ligase B) Length = 308 Score = 27.3 bits (59), Expect = 9.4 Identities = 15/46 (32%), Positives = 23/46 (50%) Frame = +3 Query: 186 SWSGAVPCETYLQQTGYRRTTRSVILRVSKQILLAEEVTVYDLRHG 323 S S V C T L++ GYR T V V+ ++ + V++ HG Sbjct: 20 SLSSGVACATTLEECGYRVTRIDVDRNVASILVELKPDVVFNALHG 65
>COA1_RAT (P11497) Acetyl-CoA carboxylase 1 (EC 6.4.1.2) (ACC-alpha) [Includes:| Biotin carboxylase (EC 6.3.4.14)] Length = 2345 Score = 27.3 bits (59), Expect = 9.4 Identities = 11/37 (29%), Positives = 21/37 (56%) Frame = +3 Query: 228 TGYRRTTRSVILRVSKQILLAEEVTVYDLRHGLQEQV 338 T +TT + + ++Q+L+A + YD+RH E + Sbjct: 1066 TQLSKTTNAKVALRARQVLIASHLPSYDVRHNQVESI 1102
>COA1_HUMAN (Q13085) Acetyl-CoA carboxylase 1 (EC 6.4.1.2) (ACC-alpha) [Includes:| Biotin carboxylase (EC 6.3.4.14)] Length = 2346 Score = 27.3 bits (59), Expect = 9.4 Identities = 11/37 (29%), Positives = 21/37 (56%) Frame = +3 Query: 228 TGYRRTTRSVILRVSKQILLAEEVTVYDLRHGLQEQV 338 T +TT + + ++Q+L+A + YD+RH E + Sbjct: 1067 TQLSKTTNAKVALRARQVLIASHLPSYDVRHNQVESI 1103 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,877,160 Number of Sequences: 219361 Number of extensions: 904300 Number of successful extensions: 1612 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 1599 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1612 length of database: 80,573,946 effective HSP length: 95 effective length of database: 59,734,651 effective search space used: 1433631624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)