ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl28b12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SPA2_YEAST (P23201) Protein SPA2 27 9.0

>SPA2_YEAST (P23201) Protein SPA2|
          Length = 1466

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = +3

Query: 93  LKIENED*GMNTKEDTQMTWQNDNIHDNLTMS*HIAKKYSIIAKLLPQQY 242
           L IENE+      E      +NDN H++L ++     KYS    L+P QY
Sbjct: 362 LSIENENLKQKISEFELHQKKNDN-HNDLKITDGFISKYSSADGLIPAQY 410


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,846,814
Number of Sequences: 219361
Number of extensions: 780767
Number of successful extensions: 1323
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1323
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 1365190992
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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