>CSE1_ARATH (Q9ZPY7) Importin-alpha re-exporter (Cellular apoptosis|
            susceptibility protein homolog)
          Length = 972

 Score = 36.2 bits (82), Expect = 0.034
 Identities = 15/31 (48%), Positives = 22/31 (70%)
 Frame = -2

Query: 429  PGRFGPTIEQHVDPANKNALLQLCAAYNANI 337
            PGR+   I ++++ AN+ AL+QLC AYN  I
Sbjct: 941  PGRYPQIIGENLEQANQTALIQLCNAYNCGI 971

>BPAEB_MOUSE (Q60824) Bullous pemphigoid antigen 1, isoforms 6/7 (BPA)|
            (Hemidesmosomal plaque protein) (Dystonia musculorum
            protein) (Dystonin) (Fragments)
          Length = 1678

 Score = 32.0 bits (71), Expect = 0.64
 Identities = 18/53 (33%), Positives = 24/53 (45%)
 Frame = +3

Query: 210  SLHMDEPETSSMDT*HQETHHPLTKNPGNQANALERRRLAPRQCWHYRQHKAE 368
            S   D    S+ DT  +E HHP   +PGN  +   + RL P   W    H+ E
Sbjct: 900  STTQDHTFASAFDTAGRECHHPAEISPGNSGHLNLKTRL-PLSRWTQEPHQTE 951

>BPAEA_MOUSE (Q91ZU8) Bullous pemphigoid antigen 1, isoform 5 (BPA)|
            (Hemidesmosomal plaque protein) (Dystonia musculorum
            protein) (Dystonin)
          Length = 2611

 Score = 32.0 bits (71), Expect = 0.64
 Identities = 18/53 (33%), Positives = 24/53 (45%)
 Frame = +3

Query: 210  SLHMDEPETSSMDT*HQETHHPLTKNPGNQANALERRRLAPRQCWHYRQHKAE 368
            S   D    S+ DT  +E HHP   +PGN  +   + RL P   W    H+ E
Sbjct: 1833 STTQDHTFASAFDTAGRECHHPAEISPGNSGHLNLKTRL-PLSRWTQEPHQTE 1884

>NU1M_PECMA (Q96186) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 1)
          Length = 354

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 14/41 (34%), Positives = 26/41 (63%)
 Frame = -3

Query: 371 FFSFVLPIMPTLSRSQTPSFQGICLVSRVFCQRMMSLLVSC 249
           FFSF++  +  L RS  P ++   L+  ++CQ ++ +L+SC
Sbjct: 307 FFSFMVVFLIVLCRSSFPRYRYDMLMKLIWCQ-ILPILMSC 346

>TYDP1_HUMAN (Q9NUW8) Tyrosyl-DNA phosphodiesterase 1 (EC 3.1.4.-) (Tyr-DNA|
           phosphodiesterase 1)
          Length = 608

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 15/69 (21%), Positives = 34/69 (49%)
 Frame = -1

Query: 265 VSWCHVSMELVSGSSMCRLMVGWEEEGRQIKSYSRNMNFVEYLSILVWNFVCVWKSSLFP 86
           +S C   +++  G+   ++M+   EEG ++  ++ N+   ++          +W S L+P
Sbjct: 248 ISLCQAKLDIAFGTHHTKMMLLLYEEGLRVVIHTSNLIHADWHQ----KTQGIWLSPLYP 303

Query: 85  RECTGTGRA 59
           R   GT ++
Sbjct: 304 RIADGTHKS 312

>TILS_ZYMMO (Q5NLX8) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)|
           (tRNA(Ile)-lysidine synthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase)
          Length = 329

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = +3

Query: 318 RRLAPRQCWHYRQHKAEEERFCLLGPHAAQW 410
           RRL     W  RQH AE  R+C     A +W
Sbjct: 209 RRLLKASPWINRQHIAEAARYCQQSEEAIEW 239

>GPC6A_RAT (Q70VB1) G-protein coupled receptor family C group 6 member A|
           precursor
          Length = 928

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = +1

Query: 226 NQKPAPWTHDTKRLIIL*QKTLETKQMPWNDGVWLLDNVGIIGSTKL 366
           N   A WT+DT        KT+ET     ND +W     G+I S +L
Sbjct: 378 NYSQATWTYDTT-------KTIETHLFKRNDFLWHYTEPGLIHSIQL 417

>DSBD_PASMU (Q9CP40) Thiol:disulfide interchange protein dsbD precursor (EC|
           1.8.1.8) (Protein-disulfide reductase) (Disulfide
           reductase)
          Length = 576

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 21/66 (31%), Positives = 27/66 (40%)
 Frame = -3

Query: 416 VLPLSSMWTQQTKTLFFSFVLPIMPTLSRSQTPSFQGICLVSRVFCQRMMSLLVSCVHGA 237
           +LP S  W  Q K  F  FVL  +P            I L+SRVF +  M L  S     
Sbjct: 361 ILPKSGNWMIQVKNAF-GFVLLALP------------IFLISRVFPEIEMPLWFSLAFAF 407

Query: 236 GFWFIH 219
             W ++
Sbjct: 408 SLWLLY 413

>COX1_CRION (P98003) Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c|
           oxidase polypeptide I) (Fragment)
          Length = 340

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
 Frame = -3

Query: 128 GLEFCVRVEEFSFSQRVYWYWSSMLSTLSVCVVIP---GGV 15
           G  FC R + FSF     + W S+++ L + + +P   GGV
Sbjct: 169 GTLFCCRRKFFSFLNWTLFIWGSLITALLLIITLPVLAGGV 209

>CI094_HUMAN (Q496M8) Protein C9orf94 precursor|
          Length = 467

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +3

Query: 336 QCWHYRQHKAEEERFCLLGPHAAQW 410
           +C H R +KA  E  C  GP  A W
Sbjct: 398 ECVHARTNKAVPEHLCSWGPRPANW 422

>GAG_AVISN (P03342) Gag polyprotein [Contains: Core protein p15; Inner coat|
           protein p12; Core shell protein p30] (Fragment)
          Length = 313

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +1

Query: 214 YTWMNQKPAPWTHDTKRLIIL*QKTLETKQMPWNDGVWLL 333
           Y W NQ P+ ++    ++I L +    T Q  W+D   LL
Sbjct: 226 YNWKNQNPSSFSQAPDQVISLLESVFYTHQPTWDDCQQLL 265

>PLCB4_BOVIN (Q07722) 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase|
           beta 4 (EC 3.1.4.11) (Phosphoinositide phospholipase C)
           (Phospholipase C-beta-4) (PLC-beta-4) (PCL-C1)
           (Fragment)
          Length = 1023

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +1

Query: 178 FGDLLLPIPPSAYTWMNQKPAPWTHDTKRLIIL*QKTLETK 300
           FGDLLL     ++     +P P  +D KR I++ ++T ET+
Sbjct: 264 FGDLLLKQALESHPLEPGRPLPSPNDLKRKILIKKQTTETE 304

>GALC_HUMAN (P54803) Galactocerebrosidase precursor (EC 3.2.1.46) (GALCERase)|
           (Galactosylceramidase) (Galactosylceramide
           beta-galactosidase) (Galactocerebroside
           beta-galactosidase)
          Length = 669

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +3

Query: 126 TKIDRYSTKFMFLLYDLIW-RPSSSHPTISLHMDEPETSSMDT*HQETHHPL 278
           TK+ + S +F+F   D +W   S    T+SLH DE  T +  T  ++  +PL
Sbjct: 412 TKLGKTSERFLFKQLDSLWLLDSDGSFTLSLHEDELFTLTTLTTGRKGSYPL 463

>VIPR_MELGA (Q91085) Vasoactive intestinal polypeptide receptor precursor|
           (VIP-R) (VIP receptor)
          Length = 457

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
 Frame = -3

Query: 374 LFFSFVLPIMPTLSRSQTPSFQGI---CLVSRVFCQRMMSLLVSCVHGAGFWFI 222
           LF SF++  +    +  T    G    C VS V C+ MM     CV    FW +
Sbjct: 180 LFMSFIMRAIAVFIKDVTLFESGEPEHCFVSSVGCKAMMVFFQYCVMANFFWLL 233

>FAS2_CANAL (P43098) Fatty acid synthase alpha subunit (EC 2.3.1.86) [Includes:|
            Acyl carrier; 3-oxoacyl-[acyl-carrier-protein] reductase
            (EC 1.1.1.100) (Beta-ketoacyl reductase);
            3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41)
            (Beta-ketoacyl synth
          Length = 1885

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +1

Query: 37   HTDNVDNMLDQYQYTLWEKENSST 108
            + DNVD +L+QY+Y L+   +  T
Sbjct: 1614 NADNVDKLLEQYEYVLYPSRSIQT 1637

>DYHC_DROME (P37276) Dynein heavy chain, cytosolic (DYHC)|
          Length = 4639

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 8/32 (25%), Positives = 21/32 (65%)
 Frame = -1

Query: 262  SWCHVSMELVSGSSMCRLMVGWEEEGRQIKSY 167
            SW +  ++L++  + CR++ GW++   ++K +
Sbjct: 1459 SWQNYELDLINYQNKCRIIRGWDDLFNKVKEH 1490


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,914,438
Number of Sequences: 219361
Number of extensions: 1540500
Number of successful extensions: 4088
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4087
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)