ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl28b06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_483801.1| Oryza sativa (japonica cultivar-group), mRNA 315 7e-83
2dbj|AK066773.1| Oryza sativa (japonica cultivar-group) cDNA clon... 315 7e-83
3dbj|AK064900.1| Oryza sativa (japonica cultivar-group) cDNA clon... 315 7e-83
4gb|BT024073.1| Zea mays clone EL01N0507C07 mRNA sequence 224 2e-55
5gb|AY105426.1| Zea mays PCO146438 mRNA sequence 224 2e-55
6dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 145 1e-31
7dbj|AP004587.3| Oryza sativa (japonica cultivar-group) genomic D... 145 1e-31
8ref|NM_105053.3| Arabidopsis thaliana membrane alanyl aminopepti... 46 0.10
9gb|BT010361.1| Arabidopsis thaliana At1g63770 mRNA, complete cds 46 0.10
10gb|AY960336.1| Arabidopsis thaliana M1 aminopeptidase mRNA, comp... 46 0.10
11gb|BT002074.1| Arabidopsis thaliana putative aminopeptidase (At1... 46 0.10
12emb|AL031122.3|HS503N11 Human DNA sequence from clone RP3-503N11... 44 0.41
13ref|NM_202354.1| Arabidopsis thaliana membrane alanyl aminopepti... 42 1.6
14emb|BX817670.1|CNS0AE3V Arabidopsis thaliana Full-length cDNA Co... 42 1.6
15gb|AC011622.6|AC011622 Arabidopsis thaliana chromosome 1 BAC F24... 42 1.6
16ref|XM_715357.1| Candida albicans SC5314 ubiquitin-protein ligas... 40 6.3
17ref|XM_715127.1| Candida albicans SC5314 ubiquitin-protein ligas... 40 6.3
18emb|CR392328.18| Zebrafish DNA sequence from clone DKEYP-108C1 i... 40 6.3
19gb|AC008715.6| Homo sapiens chromosome 5 clone CTB-84H3, complet... 40 6.3
20dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
21gb|AC137770.3| Homo sapiens chromosome 5 clone CTC-806A22, compl... 40 6.3
22gb|AY190940.1| Drosophila erecta clone DERF01_19_N16 (D1428) gen... 40 6.3
23dbj|AP003577.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3

>ref|XM_483801.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3145

 Score =  315 bits (159), Expect = 7e-83
 Identities = 291/335 (86%)
 Strand = Plus / Minus

                                                                        
Query: 136  aagctgccagacttttcgaggctatctcatagacattttcagaaagtccattggctgaga 195
            |||||||||| || || || |||||||| || ||||| || || || ||||||||||| |
Sbjct: 2907 aagctgccaggctctttgaagctatctcgtacacattctctgatagcccattggctgaca 2848

                                                                        
Query: 196  taatcatctccaactgggccttagcaagagcttgtctcgtctcgtcatatctcctccatc 255
              |||||||||| ||| ||||||||||||||||||||  |||| ||||||| |||||| |
Sbjct: 2847 cgatcatctccagctgagccttagcaagagcttgtctgctctcatcatatcgcctccacc 2788

                                                                        
Query: 256  gagagaatgctgacaccatgcgggatgccacctgaggatttattttgtcgagctgtaaaa 315
            ||||||| ||||||||||||||||| ||||||||||||||||| ||||| ||||||||||
Sbjct: 2787 gagagaaagctgacaccatgcgggaggccacctgaggatttatcttgtctagctgtaaaa 2728

                                                                        
Query: 316  caacttcacccaagaacttgtaaccagaaccatctttcgcgtgaaaactcacaggtgacc 375
            |||||||||||||||||||||||||||| |||||||| || || ||| ||||||| ||||
Sbjct: 2727 caacttcacccaagaacttgtaaccagagccatcttttgcatggaaattcacaggggacc 2668

                                                                        
Query: 376  cacaaaagcctccaattaaagagtataccttgttcggattccgcatgtcaaaagcaggat 435
            ||||||| ||||||||||  || || |||||||||||||||| ||||||||||||||| |
Sbjct: 2667 cacaaaatcctccaattagcgaatacaccttgttcggattcctcatgtcaaaagcagggt 2608

                                               
Query: 436  gagccagtaacttccgaacattggctacatttcca 470
            || | ||||||||  |||| || || |||||||||
Sbjct: 2607 gaccaagtaacttttgaacgttagcaacatttcca 2573



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>dbj|AK066773.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013081C24, full
            insert sequence
          Length = 2519

 Score =  315 bits (159), Expect = 7e-83
 Identities = 291/335 (86%)
 Strand = Plus / Minus

                                                                        
Query: 136  aagctgccagacttttcgaggctatctcatagacattttcagaaagtccattggctgaga 195
            |||||||||| || || || |||||||| || ||||| || || || ||||||||||| |
Sbjct: 2325 aagctgccaggctctttgaagctatctcgtacacattctctgatagcccattggctgaca 2266

                                                                        
Query: 196  taatcatctccaactgggccttagcaagagcttgtctcgtctcgtcatatctcctccatc 255
              |||||||||| ||| ||||||||||||||||||||  |||| ||||||| |||||| |
Sbjct: 2265 cgatcatctccagctgagccttagcaagagcttgtctgctctcatcatatcgcctccacc 2206

                                                                        
Query: 256  gagagaatgctgacaccatgcgggatgccacctgaggatttattttgtcgagctgtaaaa 315
            ||||||| ||||||||||||||||| ||||||||||||||||| ||||| ||||||||||
Sbjct: 2205 gagagaaagctgacaccatgcgggaggccacctgaggatttatcttgtctagctgtaaaa 2146

                                                                        
Query: 316  caacttcacccaagaacttgtaaccagaaccatctttcgcgtgaaaactcacaggtgacc 375
            |||||||||||||||||||||||||||| |||||||| || || ||| ||||||| ||||
Sbjct: 2145 caacttcacccaagaacttgtaaccagagccatcttttgcatggaaattcacaggggacc 2086

                                                                        
Query: 376  cacaaaagcctccaattaaagagtataccttgttcggattccgcatgtcaaaagcaggat 435
            ||||||| ||||||||||  || || |||||||||||||||| ||||||||||||||| |
Sbjct: 2085 cacaaaatcctccaattagcgaatacaccttgttcggattcctcatgtcaaaagcagggt 2026

                                               
Query: 436  gagccagtaacttccgaacattggctacatttcca 470
            || | ||||||||  |||| || || |||||||||
Sbjct: 2025 gaccaagtaacttttgaacgttagcaacatttcca 1991



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>dbj|AK064900.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000L14, full
            insert sequence
          Length = 3181

 Score =  315 bits (159), Expect = 7e-83
 Identities = 291/335 (86%)
 Strand = Plus / Minus

                                                                        
Query: 136  aagctgccagacttttcgaggctatctcatagacattttcagaaagtccattggctgaga 195
            |||||||||| || || || |||||||| || ||||| || || || ||||||||||| |
Sbjct: 2943 aagctgccaggctctttgaagctatctcgtacacattctctgatagcccattggctgaca 2884

                                                                        
Query: 196  taatcatctccaactgggccttagcaagagcttgtctcgtctcgtcatatctcctccatc 255
              |||||||||| ||| ||||||||||||||||||||  |||| ||||||| |||||| |
Sbjct: 2883 cgatcatctccagctgagccttagcaagagcttgtctgctctcatcatatcgcctccacc 2824

                                                                        
Query: 256  gagagaatgctgacaccatgcgggatgccacctgaggatttattttgtcgagctgtaaaa 315
            ||||||| ||||||||||||||||| ||||||||||||||||| ||||| ||||||||||
Sbjct: 2823 gagagaaagctgacaccatgcgggaggccacctgaggatttatcttgtctagctgtaaaa 2764

                                                                        
Query: 316  caacttcacccaagaacttgtaaccagaaccatctttcgcgtgaaaactcacaggtgacc 375
            |||||||||||||||||||||||||||| |||||||| || || ||| ||||||| ||||
Sbjct: 2763 caacttcacccaagaacttgtaaccagagccatcttttgcatggaaattcacaggggacc 2704

                                                                        
Query: 376  cacaaaagcctccaattaaagagtataccttgttcggattccgcatgtcaaaagcaggat 435
            ||||||| ||||||||||  || || |||||||||||||||| ||||||||||||||| |
Sbjct: 2703 cacaaaatcctccaattagcgaatacaccttgttcggattcctcatgtcaaaagcagggt 2644

                                               
Query: 436  gagccagtaacttccgaacattggctacatttcca 470
            || | ||||||||  |||| || || |||||||||
Sbjct: 2643 gaccaagtaacttttgaacgttagcaacatttcca 2609



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>gb|BT024073.1| Zea mays clone EL01N0507C07 mRNA sequence
          Length = 2068

 Score =  224 bits (113), Expect = 2e-55
 Identities = 233/273 (85%)
 Strand = Plus / Minus

                                                                        
Query: 198  atcatctccaactgggccttagcaagagcttgtctcgtctcgtcatatctcctccatcga 257
            |||||||||| |||||||||||||||||||||||| |||| ||| || | |||||| |||
Sbjct: 1828 atcatctccagctgggccttagcaagagcttgtctggtcttgtcgtaccgcctccaccga 1769

                                                                        
Query: 258  gagaatgctgacaccatgcgggatgccacctgaggatttattttgtcgagctgtaaaaca 317
            || |||||||| ||||||||||| ||||||||||| ||||| ||||| ||||| ||||| 
Sbjct: 1768 gaaaatgctgaaaccatgcgggaggccacctgagggtttatcttgtcaagctgcaaaacg 1709

                                                                        
Query: 318  acttcacccaagaacttgtaaccagaaccatctttcgcgtgaaaactcacaggtgaccca 377
            |  ||||||||||||||||| |||||||||||||||||||| ||  |||||||||| |||
Sbjct: 1708 atctcacccaagaacttgtacccagaaccatctttcgcgtggaagttcacaggtgagcca 1649

                                                                        
Query: 378  caaaagcctccaattaaagagtataccttgttcggattccgcatgtcaaaagcaggatga 437
            || || || || ||||  ||||| |||||||| ||||||| || ||| |||||||| |||
Sbjct: 1648 cagaatcccccgattagtgagtacaccttgttgggattcctcaggtcgaaagcagggtga 1589

                                             
Query: 438  gccagtaacttccgaacattggctacatttcca 470
            | ||| | |||| ||||||| || |||||||||
Sbjct: 1588 gacagcagcttctgaacatttgcaacatttcca 1556



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>gb|AY105426.1| Zea mays PCO146438 mRNA sequence
          Length = 3165

 Score =  224 bits (113), Expect = 2e-55
 Identities = 233/273 (85%)
 Strand = Plus / Minus

                                                                        
Query: 198  atcatctccaactgggccttagcaagagcttgtctcgtctcgtcatatctcctccatcga 257
            |||||||||| |||||||||||||||||||||||| |||| ||| || | |||||| |||
Sbjct: 2954 atcatctccagctgggccttagcaagagcttgtctggtcttgtcgtaccgcctccaccga 2895

                                                                        
Query: 258  gagaatgctgacaccatgcgggatgccacctgaggatttattttgtcgagctgtaaaaca 317
            || |||||||| ||||||||||| ||||||||||| ||||| ||||| ||||| ||||| 
Sbjct: 2894 gaaaatgctgaaaccatgcgggaggccacctgagggtttatcttgtcaagctgcaaaacg 2835

                                                                        
Query: 318  acttcacccaagaacttgtaaccagaaccatctttcgcgtgaaaactcacaggtgaccca 377
            |  ||||||||||||||||| |||||||||||||||||||| ||  |||||||||| |||
Sbjct: 2834 atctcacccaagaacttgtacccagaaccatctttcgcgtggaagttcacaggtgagcca 2775

                                                                        
Query: 378  caaaagcctccaattaaagagtataccttgttcggattccgcatgtcaaaagcaggatga 437
            || || || || ||||  ||||| |||||||| ||||||| || ||| |||||||| |||
Sbjct: 2774 cagaatcccccgattagtgagtacaccttgttgggattcctcaggtcgaaagcagggtga 2715

                                             
Query: 438  gccagtaacttccgaacattggctacatttcca 470
            | ||| | |||| ||||||| || |||||||||
Sbjct: 2714 gacagcagcttctgaacatttgcaacatttcca 2682



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  145 bits (73), Expect = 1e-31
 Identities = 100/109 (91%)
 Strand = Plus / Plus

                                                                            
Query: 285      acctgaggatttattttgtcgagctgtaaaacaacttcacccaagaacttgtaaccagaa 344
                |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| 
Sbjct: 28166653 acctgaggatttatcttgtctagctgtaaaacaacttcacccaagaacttgtaaccagag 28166712

                                                                 
Query: 345      ccatctttcgcgtgaaaactcacaggtgacccacaaaagcctccaatta 393
                |||||||| || || ||| ||||||| ||||||||||| ||||||||||
Sbjct: 28166713 ccatcttttgcatggaaattcacaggggacccacaaaatcctccaatta 28166761



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 68/75 (90%)
 Strand = Plus / Plus

                                                                            
Query: 214      ccttagcaagagcttgtctcgtctcgtcatatctcctccatcgagagaatgctgacacca 273
                |||||||||||||||||||  |||| ||||||| |||||| |||||||| ||||||||||
Sbjct: 28166495 ccttagcaagagcttgtctgctctcatcatatcgcctccaccgagagaaagctgacacca 28166554

                               
Query: 274      tgcgggatgccacct 288
                ||||||| |||||||
Sbjct: 28166555 tgcgggaggccacct 28166569



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                            
Query: 400      ataccttgttcggattccgcatgtcaaaagcaggatgagccagtaacttccgaacattgg 459
                |||||||||||||||||| ||||||||||||||| ||| | ||||||||  |||| || |
Sbjct: 28166842 ataccttgttcggattcctcatgtcaaaagcagggtgaccaagtaacttttgaacgttag 28166901

                           
Query: 460      ctacatttcca 470
                | |||||||||
Sbjct: 28166902 caacatttcca 28166912



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 66/81 (81%)
 Strand = Plus / Plus

                                                                            
Query: 136      aagctgccagacttttcgaggctatctcatagacattttcagaaagtccattggctgaga 195
                |||||||||| || || || |||||||| || ||||| || || || ||||||||||| |
Sbjct: 28166340 aagctgccaggctctttgaagctatctcgtacacattctctgatagcccattggctgaca 28166399

                                     
Query: 196      taatcatctccaactgggcct 216
                  |||||||||| ||| ||||
Sbjct: 28166400 cgatcatctccagctgagcct 28166420



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>dbj|AP004587.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0543D10
          Length = 134866

 Score =  145 bits (73), Expect = 1e-31
 Identities = 100/109 (91%)
 Strand = Plus / Plus

                                                                         
Query: 285   acctgaggatttattttgtcgagctgtaaaacaacttcacccaagaacttgtaaccagaa 344
             |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| 
Sbjct: 50126 acctgaggatttatcttgtctagctgtaaaacaacttcacccaagaacttgtaaccagag 50185

                                                              
Query: 345   ccatctttcgcgtgaaaactcacaggtgacccacaaaagcctccaatta 393
             |||||||| || || ||| ||||||| ||||||||||| ||||||||||
Sbjct: 50186 ccatcttttgcatggaaattcacaggggacccacaaaatcctccaatta 50234



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 68/75 (90%)
 Strand = Plus / Plus

                                                                         
Query: 214   ccttagcaagagcttgtctcgtctcgtcatatctcctccatcgagagaatgctgacacca 273
             |||||||||||||||||||  |||| ||||||| |||||| |||||||| ||||||||||
Sbjct: 49968 ccttagcaagagcttgtctgctctcatcatatcgcctccaccgagagaaagctgacacca 50027

                            
Query: 274   tgcgggatgccacct 288
             ||||||| |||||||
Sbjct: 50028 tgcgggaggccacct 50042



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                         
Query: 400   ataccttgttcggattccgcatgtcaaaagcaggatgagccagtaacttccgaacattgg 459
             |||||||||||||||||| ||||||||||||||| ||| | ||||||||  |||| || |
Sbjct: 50315 ataccttgttcggattcctcatgtcaaaagcagggtgaccaagtaacttttgaacgttag 50374

                        
Query: 460   ctacatttcca 470
             | |||||||||
Sbjct: 50375 caacatttcca 50385



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 66/81 (81%)
 Strand = Plus / Plus

                                                                         
Query: 136   aagctgccagacttttcgaggctatctcatagacattttcagaaagtccattggctgaga 195
             |||||||||| || || || |||||||| || ||||| || || || ||||||||||| |
Sbjct: 49813 aagctgccaggctctttgaagctatctcgtacacattctctgatagcccattggctgaca 49872

                                  
Query: 196   taatcatctccaactgggcct 216
               |||||||||| ||| ||||
Sbjct: 49873 cgatcatctccagctgagcct 49893



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>ref|NM_105053.3| Arabidopsis thaliana membrane alanyl aminopeptidase AT1G63770
            transcript variant AT1G63770.1 mRNA, complete cds
          Length = 3229

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 68/83 (81%)
 Strand = Plus / Minus

                                                                        
Query: 267  gacaccatgcgggatgccacctgaggatttattttgtcgagctgtaaaacaacttcaccc 326
            |||||||| || || || |||||||| || | |||||| | ||| | |||||  ||||||
Sbjct: 2811 gacaccatacgagaagcaacctgagggttcaatttgtctaactggacaacaatgtcaccc 2752

                                   
Query: 327  aagaacttgtaaccagaaccatc 349
            |||||||||||||| || |||||
Sbjct: 2751 aagaacttgtaacctgatccatc 2729



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>gb|BT010361.1| Arabidopsis thaliana At1g63770 mRNA, complete cds
          Length = 2652

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 68/83 (81%)
 Strand = Plus / Minus

                                                                        
Query: 267  gacaccatgcgggatgccacctgaggatttattttgtcgagctgtaaaacaacttcaccc 326
            |||||||| || || || |||||||| || | |||||| | ||| | |||||  ||||||
Sbjct: 2519 gacaccatacgagaagcaacctgagggttcaatttgtctaactggacaacaatgtcaccc 2460

                                   
Query: 327  aagaacttgtaaccagaaccatc 349
            |||||||||||||| || |||||
Sbjct: 2459 aagaacttgtaacctgatccatc 2437



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>gb|AY960336.1| Arabidopsis thaliana M1 aminopeptidase mRNA, complete cds,
            alternatively spliced
          Length = 3051

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 68/83 (81%)
 Strand = Plus / Minus

                                                                        
Query: 267  gacaccatgcgggatgccacctgaggatttattttgtcgagctgtaaaacaacttcaccc 326
            |||||||| || || || |||||||| || | |||||| | ||| | |||||  ||||||
Sbjct: 2747 gacaccatacgagaagcaacctgagggttcaatttgtctaactggacaacaatgtcaccc 2688

                                   
Query: 327  aagaacttgtaaccagaaccatc 349
            |||||||||||||| || |||||
Sbjct: 2687 aagaacttgtaacctgatccatc 2665



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>gb|BT002074.1| Arabidopsis thaliana putative aminopeptidase (At1g63770) mRNA,
            complete cds
          Length = 3056

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 68/83 (81%)
 Strand = Plus / Minus

                                                                        
Query: 267  gacaccatgcgggatgccacctgaggatttattttgtcgagctgtaaaacaacttcaccc 326
            |||||||| || || || |||||||| || | |||||| | ||| | |||||  ||||||
Sbjct: 2749 gacaccatacgagaagcaacctgagggttcaatttgtctaactggacaacaatgtcaccc 2690

                                   
Query: 327  aagaacttgtaaccagaaccatc 349
            |||||||||||||| || |||||
Sbjct: 2689 aagaacttgtaacctgatccatc 2667



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>emb|AL031122.3|HS503N11 Human DNA sequence from clone RP3-503N11 on chromosome 6p24.1-24.3,
             complete sequence
          Length = 94749

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 332   cttgtaaccagaaccatctttc 353
             ||||||||||||||||||||||
Sbjct: 49323 cttgtaaccagaaccatctttc 49302



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>ref|NM_202354.1| Arabidopsis thaliana membrane alanyl aminopeptidase AT1G63770
            transcript variant AT1G63770.2 mRNA, complete cds
          Length = 3331

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 321  tcacccaagaacttgtaaccagaaccatc 349
            |||||||||||||||||||| || |||||
Sbjct: 2753 tcacccaagaacttgtaacctgatccatc 2725



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>emb|BX817670.1|CNS0AE3V Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL36ZA11 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 654

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 321 tcacccaagaacttgtaaccagaaccatc 349
           |||||||||||||||||||| || |||||
Sbjct: 187 tcacccaagaacttgtaacctgatccatc 159



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>gb|AC011622.6|AC011622 Arabidopsis thaliana chromosome 1 BAC F24D7 genomic sequence, complete
             sequence
          Length = 87575

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 321   tcacccaagaacttgtaaccagaaccatc 349
             |||||||||||||||||||| || |||||
Sbjct: 10530 tcacccaagaacttgtaacctgatccatc 10502



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>ref|XM_715357.1| Candida albicans SC5314 ubiquitin-protein ligase (CaO19_2697), mRNA
          Length = 5697

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 290  aggatttattttgtcgagct 309
            ||||||||||||||||||||
Sbjct: 1094 aggatttattttgtcgagct 1113



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>ref|XM_715127.1| Candida albicans SC5314 ubiquitin-protein ligase (CaO19_10212), mRNA
          Length = 5697

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 290  aggatttattttgtcgagct 309
            ||||||||||||||||||||
Sbjct: 1094 aggatttattttgtcgagct 1113



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>emb|CR392328.18| Zebrafish DNA sequence from clone DKEYP-108C1 in linkage group 5,
            complete sequence
          Length = 182066

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 99   tggcagaatcaaatttgttt 118
            ||||||||||||||||||||
Sbjct: 9480 tggcagaatcaaatttgttt 9461



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>gb|AC008715.6| Homo sapiens chromosome 5 clone CTB-84H3, complete sequence
          Length = 121737

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    taaatacagcagaatatatt 52
             ||||||||||||||||||||
Sbjct: 89696 taaatacagcagaatatatt 89677



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 2        ccactatagtagcctgttat 21
                ||||||||||||||||||||
Sbjct: 16754860 ccactatagtagcctgttat 16754841



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>gb|AC137770.3| Homo sapiens chromosome 5 clone CTC-806A22, complete sequence
          Length = 156582

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    taaatacagcagaatatatt 52
             ||||||||||||||||||||
Sbjct: 45601 taaatacagcagaatatatt 45620



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>gb|AY190940.1| Drosophila erecta clone DERF01_19_N16 (D1428) genomic sequence
          Length = 43180

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 32    ctaaatacagcagaatatattcagttaa 59
             |||||| |||||||||||||||| ||||
Sbjct: 28764 ctaaatgcagcagaatatattcatttaa 28737



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>dbj|AP003577.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0664F03
          Length = 184242

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 2      ccactatagtagcctgttat 21
              ||||||||||||||||||||
Sbjct: 106347 ccactatagtagcctgttat 106328


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,239,102
Number of Sequences: 3902068
Number of extensions: 4239102
Number of successful extensions: 92977
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92907
Number of HSP's gapped (non-prelim): 70
length of query: 470
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 448
effective length of database: 17,147,199,772
effective search space: 7681945497856
effective search space used: 7681945497856
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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