Clone Name | rbastl28b02 |
---|---|
Clone Library Name | barley_pub |
>SPR1_SACBA (Q876J2) Sporulation-specific glucan 1,3-beta-glucosidase precursor| (EC 3.2.1.58) (Exo-1,3-beta-glucanase) Length = 445 Score = 33.5 bits (75), Expect = 0.21 Identities = 26/70 (37%), Positives = 33/70 (47%), Gaps = 2/70 (2%) Frame = -2 Query: 397 AKHEAEGL--DEPLQLTGKFIEAFGASYVVAKLLSSEEMTQEWKKEASGCILWCMRTLNV 224 A +E GL +E Q T KFIEA L + EMT W I+WC +T N Sbjct: 374 ANNENVGLWSEERKQNTRKFIEA---------QLDAFEMTGGW-------IMWCYKTENS 417 Query: 223 ILWDA*NVVQ 194 I WD ++Q Sbjct: 418 IEWDVEKLIQ 427
>SPR1_YEAST (P32603) Sporulation-specific glucan 1,3-beta-glucosidase precursor| (EC 3.2.1.58) (Exo-1,3-beta-glucanase) Length = 445 Score = 32.3 bits (72), Expect = 0.46 Identities = 22/60 (36%), Positives = 28/60 (46%) Frame = -2 Query: 373 DEPLQLTGKFIEAFGASYVVAKLLSSEEMTQEWKKEASGCILWCMRTLNVILWDA*NVVQ 194 +E Q T KFIEA L + EMT W I+WC +T N I WD ++Q Sbjct: 384 EERKQNTRKFIEA---------QLDAFEMTGGW-------IMWCYKTENSIEWDVEKLIQ 427
>SYV_NOCFA (Q5Z048) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 893 Score = 31.2 bits (69), Expect = 1.0 Identities = 17/49 (34%), Positives = 25/49 (51%) Frame = -2 Query: 376 LDEPLQLTGKFIEAFGASYVVAKLLSSEEMTQEWKKEASGCILWCMRTL 230 +++ L + GK E FG V K+ +WK+E+ G I W MR L Sbjct: 105 VEKQLAVDGKTKEDFGRELFVEKVW-------DWKRESGGAIQWQMRAL 146
>IKBA_RAT (Q63746) NF-kappa-B inhibitor alpha (I-kappa-B-alpha)| (IkappaBalpha) (IKB-alpha) (RL/IF-1) Length = 314 Score = 29.6 bits (65), Expect = 3.0 Identities = 15/50 (30%), Positives = 26/50 (52%) Frame = +2 Query: 161 TSIQMNCPQLVLDNISCIPQNNIQSSHTPQNATRSFLLPFLGHFFTGQQL 310 T IQ QL L+N+ +P++ + S+ ++ LP+ F GQ+L Sbjct: 263 TRIQQQLGQLTLENLQTLPESEDEESYDTESEFTEDELPYDDCVFGGQRL 312
>IKBA_MOUSE (Q9Z1E3) NF-kappa-B inhibitor alpha (I-kappa-B-alpha)| (IkappaBalpha) (IKB-alpha) Length = 314 Score = 29.6 bits (65), Expect = 3.0 Identities = 15/50 (30%), Positives = 26/50 (52%) Frame = +2 Query: 161 TSIQMNCPQLVLDNISCIPQNNIQSSHTPQNATRSFLLPFLGHFFTGQQL 310 T IQ QL L+N+ +P++ + S+ ++ LP+ F GQ+L Sbjct: 263 TRIQQQLGQLTLENLQMLPESEDEESYDTESEFTEDELPYDDCVFGGQRL 312
>INSR_HUMAN (P06213) Insulin receptor precursor (EC 2.7.10.1) (IR) (CD220| antigen) [Contains: Insulin receptor alpha subunit; Insulin receptor beta subunit] Length = 1382 Score = 29.6 bits (65), Expect = 3.0 Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 8/72 (11%) Frame = +2 Query: 131 FNYIQD--HSKRTSIQMNCPQLVLDNISCIPQNNIQSSHTPQNATRSFLLPFLG------ 286 F++ QD H + S + C Q V+ N CIP+ S +T N++ P LG Sbjct: 283 FSFCQDLHHKCKNSRRQGCHQYVIHNNKCIPE--CPSGYT-MNSSNLLCTPCLGPCPKVC 339 Query: 287 HFFTGQQLCDHI 322 H G++ D + Sbjct: 340 HLLEGEKTIDSV 351
>AATC_YEAST (P23542) Aspartate aminotransferase, cytoplasmic (EC 2.6.1.1)| (Transaminase A) Length = 417 Score = 28.5 bits (62), Expect = 6.7 Identities = 12/24 (50%), Positives = 19/24 (79%) Frame = -2 Query: 337 AFGASYVVAKLLSSEEMTQEWKKE 266 A+GA +VAKLL + E+T++W K+ Sbjct: 300 AYGAK-IVAKLLETPELTEQWHKD 322
>HELZ_HUMAN (P42694) Probable helicase with zinc-finger domain (EC 3.6.1.-)| Length = 1942 Score = 28.5 bits (62), Expect = 6.7 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Frame = +2 Query: 110 PGQSVA*FNYIQDHSKRTSIQMNCPQLVLDNISCIPQNNIQ---SSHTPQ 250 P S+A +QDHS ++S + P+ ++ S P NI SS T Q Sbjct: 1777 PQDSLAQCKELQDHSNQSSFNFSSPESWVNTTSSTPYQNIPCNGSSRTAQ 1826
>PSD3_HUMAN (O43242) 26S proteasome non-ATPase regulatory subunit 3 (26S| proteasome regulatory subunit S3) (Proteasome subunit p58) Length = 534 Score = 28.5 bits (62), Expect = 6.7 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 13/61 (21%) Frame = +2 Query: 140 IQDHSKRT--SIQMNCPQLVLDNISCIPQNNIQSSH-----------TPQNATRSFLLPF 280 I++H K+ ++ P+ VL + +P + + +H T NATR FLLPF Sbjct: 75 IKEHVKQLEKAVSGKEPRFVLRALRMLPSTSRRLNHYVLYKAVQGFFTSNNATRDFLLPF 134 Query: 281 L 283 L Sbjct: 135 L 135 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,879,128 Number of Sequences: 219361 Number of extensions: 1282950 Number of successful extensions: 3111 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 3055 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3110 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2278320915 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)