ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl28a12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL806535.7| Mouse DNA sequence from clone RP23-456J6 on chro... 50 0.004
2gb|AC162171.7| Mus musculus chromosome 5, clone RP23-143N11, com... 42 0.95
3gb|AC121782.3| Mus musculus BAC clone RP23-367M7 from chromosome... 42 0.95
4gb|AC087062.25| Mus musculus strain C57BL/6J clone rp23-15p14 ma... 42 0.95
5ref|NM_172300.2| Mus musculus ubiquitin-conjugating enzyme E2Z (... 42 0.95
6gb|AC098642.5| Genomic sequence for Mus musculus, clone RP23-270... 42 0.95
7dbj|AK149770.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 42 0.95
8dbj|AK152529.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 42 0.95
9dbj|AK153328.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 42 0.95
10dbj|AK168942.1| Mus musculus 17 days pregnant adult female amnio... 42 0.95
11dbj|AK077793.1| Mus musculus adult male thymus cDNA, RIKEN full-... 42 0.95
12dbj|AK005524.1| Mus musculus adult female placenta cDNA, RIKEN f... 42 0.95
13gb|AC117578.9| Mus musculus chromosome 5, clone RP23-36I22, comp... 42 0.95
14dbj|AK211733.1| Mus musculus cDNA, clone:Y2G0122L02, strand:plus... 42 0.95
15gb|BC054412.1| Mus musculus ubiquitin-conjugating enzyme E2Z (pu... 42 0.95
16gb|BC027266.1| Mus musculus ubiquitin-conjugating enzyme E2Z (pu... 42 0.95
17emb|AL603682.36| Mouse DNA sequence from clone RP23-235J5 on chr... 42 0.95
18gb|AC124637.10| Mus musculus chromosome 15, clone RP23-458B6, co... 40 3.7
19ref|XM_585495.2| PREDICTED: Bos taurus similar to 6-phosphofruct... 40 3.7
20ref|XM_822770.1| Trypanosoma brucei TREU927 hypothetical protein... 40 3.7
21emb|Z93928.1|HS127B14 Human DNA sequence from clone RP1-127B14 o... 40 3.7
22emb|AL662914.8| Human DNA sequence from clone RP13-419C3 on chro... 40 3.7
23emb|AL356968.41| Human DNA sequence from clone RP11-329A14 on ch... 40 3.7
24emb|AL161638.10| Human DNA sequence from clone RP4-591L5 on chro... 40 3.7
25emb|AL138997.18| Human DNA sequence from clone RP11-10O23 on chr... 40 3.7
26emb|AL139151.13| Human DNA sequence from clone RP4-703F12 on chr... 40 3.7
27emb|AL109924.20|HSDJ495K2 Human DNA sequence from clone RP3-495K... 40 3.7
28gb|AC109322.16| Homo sapiens chromosome 8, clone CTD-3065J16, co... 40 3.7
29emb|BX510656.7| Zebrafish DNA sequence from clone CH211-132N7 in... 40 3.7
30gb|AC012564.21| Homo sapiens chromosome 8, clone RP11-85M22, com... 40 3.7
31gb|AC016168.18| Homo sapiens chromosome 17, clone RP11-87G24, co... 40 3.7
32gb|AC099788.2| Homo sapiens chromosome 1 clone RP11-97B14, compl... 40 3.7
33gb|AC092264.2| Homo sapiens chromosome 1 clone RP4-640P3, comple... 40 3.7
34ref|XM_704536.1| PREDICTED: Danio rerio similar to ring finger p... 40 3.7
35ref|XM_686877.1| PREDICTED: Danio rerio similar to ring finger p... 40 3.7
36gb|AC139671.10| Mus musculus chromosome 15, clone RP23-230O9, co... 40 3.7
37gb|AC090827.11| Homo sapiens chromosome 8, clone CTD-2594K21, co... 40 3.7
38gb|AC093084.4| Homo sapiens BAC clone RP11-699O7 from 2, complet... 40 3.7
39emb|BX248312.11| Zebrafish DNA sequence from clone CH211-139O4, ... 40 3.7
40gb|AC027663.14|AC027663 Homo sapiens chromosome 1 clone RP11-285... 40 3.7
41dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 40 3.7
42dbj|BS000052.1| Pan troglodytes chromosome 22 clone:RP43-049N07,... 40 3.7
43gb|U95738.1|HSU95738 Human chromosome 16p13.11 BAC clone CIT987S... 40 3.7
44dbj|AP001676.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 3.7
45dbj|AP000566.4| Homo sapiens genomic DNA, chromosome 21q, clone:... 40 3.7
46emb|AL935053.6| Zebrafish DNA sequence from clone CH211-162M14, ... 40 3.7
47dbj|AP004716.1| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 3.7 
>emb|AL806535.7| Mouse DNA sequence from clone RP23-456J6 on chromosome 4, complete
              sequence
          Length = 181854

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                       
Query: 32     aaatcctccagtatatacatgaatt 56
              |||||||||||||||||||||||||
Sbjct: 163320 aaatcctccagtatatacatgaatt 163296
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>gb|AC162171.7| Mus musculus chromosome 5, clone RP23-143N11, complete sequence
          Length = 229553

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 171    gggcagggcaggtggctctct 191
              |||||||||||||||||||||
Sbjct: 101427 gggcagggcaggtggctctct 101447
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>gb|AC121782.3| Mus musculus BAC clone RP23-367M7 from chromosome 3, complete sequence
          Length = 165328

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 171   gggcagggcaggtggctctct 191
             |||||||||||||||||||||
Sbjct: 36172 gggcagggcaggtggctctct 36152
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>gb|AC087062.25| Mus musculus strain C57BL/6J clone rp23-15p14 map 3, complete sequence
          Length = 224451

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 171   gggcagggcaggtggctctct 191
             |||||||||||||||||||||
Sbjct: 69356 gggcagggcaggtggctctct 69376
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>ref|NM_172300.2| Mus musculus ubiquitin-conjugating enzyme E2Z (putative) (Ube2z),
            mRNA
          Length = 3974

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 171  gggcagggcaggtggctctct 191
            |||||||||||||||||||||
Sbjct: 2427 gggcagggcaggtggctctct 2407
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>gb|AC098642.5| Genomic sequence for Mus musculus, clone RP23-270O7, complete sequence
          Length = 188834

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 171   gggcagggcaggtggctctct 191
             |||||||||||||||||||||
Sbjct: 32220 gggcagggcaggtggctctct 32200
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>dbj|AK149770.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched
            library, clone:G530015K19 product:tripartite motif
            protein 34, full insert sequence
          Length = 2908

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 171  gggcagggcaggtggctctct 191
            |||||||||||||||||||||
Sbjct: 2428 gggcagggcaggtggctctct 2408
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>dbj|AK152529.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched
            library, clone:I830078F06 product:tripartite motif
            protein 34, full insert sequence
          Length = 2624

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 171  gggcagggcaggtggctctct 191
            |||||||||||||||||||||
Sbjct: 2142 gggcagggcaggtggctctct 2122
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>dbj|AK153328.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched
            library, clone:I830138O19 product:hypothetical
            Ubiquitin-conjugating enzymes containing protein, full
            insert sequence
          Length = 2640

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 171  gggcagggcaggtggctctct 191
            |||||||||||||||||||||
Sbjct: 2159 gggcagggcaggtggctctct 2139
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>dbj|AK168942.1| Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN
            full-length enriched library, clone:I920066K10
            product:tripartite motif protein 34, full insert sequence
          Length = 2602

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 171  gggcagggcaggtggctctct 191
            |||||||||||||||||||||
Sbjct: 2121 gggcagggcaggtggctctct 2101
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>dbj|AK077793.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched
            library, clone:5830473M12 product:hypothetical
            Ubiquitin-conjugating enzymes containing protein, full
            insert sequence
          Length = 3974

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 171  gggcagggcaggtggctctct 191
            |||||||||||||||||||||
Sbjct: 2427 gggcagggcaggtggctctct 2407
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>dbj|AK005524.1| Mus musculus adult female placenta cDNA, RIKEN full-length enriched
            library, clone:1600023F01 product:hypothetical
            Ubiquitin-conjugating enzymes containing protein, full
            insert sequence
          Length = 2393

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 171  gggcagggcaggtggctctct 191
            |||||||||||||||||||||
Sbjct: 1979 gggcagggcaggtggctctct 1959
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>gb|AC117578.9| Mus musculus chromosome 5, clone RP23-36I22, complete sequence
          Length = 213371

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 171   gggcagggcaggtggctctct 191
             |||||||||||||||||||||
Sbjct: 45337 gggcagggcaggtggctctct 45317
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>dbj|AK211733.1| Mus musculus cDNA, clone:Y2G0122L02, strand:plus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000014493, based on BLAT search
          Length = 394

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 171 gggcagggcaggtggctctct 191
           |||||||||||||||||||||
Sbjct: 364 gggcagggcaggtggctctct 344
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>gb|BC054412.1| Mus musculus ubiquitin-conjugating enzyme E2Z (putative), mRNA (cDNA
            clone MGC:62703 IMAGE:2646768), complete cds
          Length = 2699

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 171  gggcagggcaggtggctctct 191
            |||||||||||||||||||||
Sbjct: 2131 gggcagggcaggtggctctct 2111
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>gb|BC027266.1| Mus musculus ubiquitin-conjugating enzyme E2Z (putative), mRNA (cDNA
            clone IMAGE:2648305), with apparent retained intron
          Length = 2517

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 171  gggcagggcaggtggctctct 191
            |||||||||||||||||||||
Sbjct: 2053 gggcagggcaggtggctctct 2033
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>emb|AL603682.36| Mouse DNA sequence from clone RP23-235J5 on chromosome 11, complete
             sequence
          Length = 211680

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 171   gggcagggcaggtggctctct 191
             |||||||||||||||||||||
Sbjct: 73257 gggcagggcaggtggctctct 73277
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>gb|AC124637.10| Mus musculus chromosome 15, clone RP23-458B6, complete sequence
          Length = 200607

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 169  gtgggcagggcaggtggctc 188
            ||||||||||||||||||||
Sbjct: 8203 gtgggcagggcaggtggctc 8222
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>ref|XM_585495.2| PREDICTED: Bos taurus similar to 6-phosphofructokinase, liver type
            (Phosphofructokinase 1) (Phosphohexokinase)
            (Phosphofructo-1-kinase isozyme B) (PFK-B) (LOC508683),
            mRNA
          Length = 2752

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 142  gctgcccctctgcctcagca 161
            ||||||||||||||||||||
Sbjct: 2560 gctgcccctctgcctcagca 2579
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>ref|XM_822770.1| Trypanosoma brucei TREU927 hypothetical protein (Tb10.61.3120)
           partial mRNA
          Length = 972

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 187 tctctgcctcagcatcggga 206
           ||||||||||||||||||||
Sbjct: 280 tctctgcctcagcatcggga 261
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>emb|Z93928.1|HS127B14 Human DNA sequence from clone RP1-127B14 on chromosome Xq22, complete
             sequence
          Length = 126263

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 179   caggtggctctctgcctcag 198
             ||||||||||||||||||||
Sbjct: 21114 caggtggctctctgcctcag 21095
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>emb|AL662914.8| Human DNA sequence from clone RP13-419C3 on chromosome X, complete
            sequence
          Length = 110403

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 179  caggtggctctctgcctcag 198
            ||||||||||||||||||||
Sbjct: 2611 caggtggctctctgcctcag 2592
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>emb|AL356968.41| Human DNA sequence from clone RP11-329A14 on chromosome 1 Contains
            the 5' end of the SPATA6 gene for spermatogenesis
            associated 6, an amyotrophic lateral sclerosis 2
            (juvenile) chromosome region, candidate 2 (ALS2CR2)
            pseudogene, a ribosomal protein L21 (RPL21) pseudogene
            and a CpG island, complete sequence
          Length = 173373

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 179  caggtggctctctgcctcag 198
            ||||||||||||||||||||
Sbjct: 3632 caggtggctctctgcctcag 3613
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>emb|AL161638.10| Human DNA sequence from clone RP4-591L5 on chromosome 1p34.2-35.3
             Contains two novel genes, complete sequence
          Length = 104511

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 140   aagctgcccctctgcctcag 159
             ||||||||||||||||||||
Sbjct: 22446 aagctgcccctctgcctcag 22427
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>emb|AL138997.18| Human DNA sequence from clone RP11-10O23 on chromosome 13 Contains a
            hepatocyte nuclear factor 4 alpha (HNF4A) pseudogene,
            complete sequence
          Length = 172342

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 179  caggtggctctctgcctcag 198
            ||||||||||||||||||||
Sbjct: 5182 caggtggctctctgcctcag 5163
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>emb|AL139151.13| Human DNA sequence from clone RP4-703F12 on chromosome 1p34.3-36.11,
             complete sequence
          Length = 80387

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 140   aagctgcccctctgcctcag 159
             ||||||||||||||||||||
Sbjct: 54459 aagctgcccctctgcctcag 54478
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>emb|AL109924.20|HSDJ495K2 Human DNA sequence from clone RP3-495K2 on chromosome 6q26-27 Contains
             three novel genes and two CpG islands, complete sequence
          Length = 130296

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 179   caggtggctctctgcctcag 198
             ||||||||||||||||||||
Sbjct: 61133 caggtggctctctgcctcag 61114
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>gb|AC109322.16| Homo sapiens chromosome 8, clone CTD-3065J16, complete sequence
          Length = 215342

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 171   gggcagggcaggtggctctc 190
             ||||||||||||||||||||
Sbjct: 44739 gggcagggcaggtggctctc 44758
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>emb|BX510656.7| Zebrafish DNA sequence from clone CH211-132N7 in linkage group 7,
              complete sequence
          Length = 174960

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 43     tatatacatgaattgctctt 62
              ||||||||||||||||||||
Sbjct: 116623 tatatacatgaattgctctt 116642
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>gb|AC012564.21| Homo sapiens chromosome 8, clone RP11-85M22, complete sequence
          Length = 207682

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 179   caggtggctctctgcctcag 198
             ||||||||||||||||||||
Sbjct: 14890 caggtggctctctgcctcag 14909
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>gb|AC016168.18| Homo sapiens chromosome 17, clone RP11-87G24, complete sequence
          Length = 193537

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 163    cgggaggtgggcagggcagg 182
              ||||||||||||||||||||
Sbjct: 148770 cgggaggtgggcagggcagg 148751
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>gb|AC099788.2| Homo sapiens chromosome 1 clone RP11-97B14, complete sequence
          Length = 148679

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 179    caggtggctctctgcctcag 198
              ||||||||||||||||||||
Sbjct: 122367 caggtggctctctgcctcag 122348
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>gb|AC092264.2| Homo sapiens chromosome 1 clone RP4-640P3, complete sequence
          Length = 113330

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 179   caggtggctctctgcctcag 198
             ||||||||||||||||||||
Sbjct: 13581 caggtggctctctgcctcag 13562
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>ref|XM_704536.1| PREDICTED: Danio rerio similar to ring finger protein, transcript
           variant 2 (LOC569246), mRNA
          Length = 1727

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 144 tgcccctctgcctcagcatc 163
           ||||||||||||||||||||
Sbjct: 690 tgcccctctgcctcagcatc 709
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>ref|XM_686877.1| PREDICTED: Danio rerio similar to ring finger protein, transcript
           variant 1 (LOC569246), mRNA
          Length = 1533

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 144 tgcccctctgcctcagcatc 163
           ||||||||||||||||||||
Sbjct: 690 tgcccctctgcctcagcatc 709
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>gb|AC139671.10| Mus musculus chromosome 15, clone RP23-230O9, complete sequence
          Length = 224181

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 169    gtgggcagggcaggtggctc 188
              ||||||||||||||||||||
Sbjct: 176815 gtgggcagggcaggtggctc 176834
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>gb|AC090827.11| Homo sapiens chromosome 8, clone CTD-2594K21, complete sequence
          Length = 135010

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 179   caggtggctctctgcctcag 198
             ||||||||||||||||||||
Sbjct: 77104 caggtggctctctgcctcag 77123
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>gb|AC093084.4| Homo sapiens BAC clone RP11-699O7 from 2, complete sequence
          Length = 167960

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 179   caggtggctctctgcctcag 198
             ||||||||||||||||||||
Sbjct: 51914 caggtggctctctgcctcag 51933
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>emb|BX248312.11| Zebrafish DNA sequence from clone CH211-139O4, complete sequence
          Length = 164857

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 43     tatatacatgaattgctctt 62
              ||||||||||||||||||||
Sbjct: 134205 tatatacatgaattgctctt 134224
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>gb|AC027663.14|AC027663 Homo sapiens chromosome 1 clone RP11-285I23, complete sequence
          Length = 170969

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 179  caggtggctctctgcctcag 198
            ||||||||||||||||||||
Sbjct: 9723 caggtggctctctgcctcag 9704
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 74     ggtggcacaggcggcaaccg 93
              ||||||||||||||||||||
Sbjct: 970576 ggtggcacaggcggcaaccg 970557
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>dbj|BS000052.1| Pan troglodytes chromosome 22 clone:RP43-049N07, map 22, complete
             sequences
          Length = 180152

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 179   caggtggctctctgcctcag 198
             ||||||||||||||||||||
Sbjct: 52497 caggtggctctctgcctcag 52478
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>gb|U95738.1|HSU95738 Human chromosome 16p13.11 BAC clone CIT987SK-29B12 complete sequence
          Length = 171368

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 140    aagctgcccctctgcctcag 159
              ||||||||||||||||||||
Sbjct: 168290 aagctgcccctctgcctcag 168271
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>dbj|AP001676.1| Homo sapiens genomic DNA, chromosome 21q, section 20/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 179    caggtggctctctgcctcag 198
              ||||||||||||||||||||
Sbjct: 109072 caggtggctctctgcctcag 109053
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>dbj|AP000566.4| Homo sapiens genomic DNA, chromosome 21q, clone:RP11-102B11, complete
             sequence
          Length = 104542

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 179   caggtggctctctgcctcag 198
             ||||||||||||||||||||
Sbjct: 95374 caggtggctctctgcctcag 95355
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>emb|AL935053.6| Zebrafish DNA sequence from clone CH211-162M14, complete sequence
          Length = 138341

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 144   tgcccctctgcctcagcatc 163
             ||||||||||||||||||||
Sbjct: 14508 tgcccctctgcctcagcatc 14527
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>dbj|AP004716.1| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1987G5
          Length = 189987

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 179   caggtggctctctgcctcag 198
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Sbjct: 54014 caggtggctctctgcctcag 54033


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,857,809
Number of Sequences: 3902068
Number of extensions: 2857809
Number of successful extensions: 52692
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 52616
Number of HSP's gapped (non-prelim): 76
length of query: 286
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 264
effective length of database: 17,147,199,772
effective search space: 4526860739808
effective search space used: 4526860739808
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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