Clone Name | rbastl28a07 |
---|---|
Clone Library Name | barley_pub |
>BGAL_PSEHA (P81650) Beta-galactosidase (EC 3.2.1.23) (Lactase)| (Beta-D-galactoside galactohydrolase) Length = 1038 Score = 29.3 bits (64), Expect = 2.7 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Frame = +3 Query: 120 GPNQWRFGLR-GEGPNQGRFSYMYVLFPETFPAQSISRLKNSHGPLQFTL 266 G + W +G G+ N +F +LFP+ P S+ K S LQFTL Sbjct: 580 GKHYWAYGGDFGDELNDRQFCINGLLFPDRTPHPSLFEAKYSQQHLQFTL 629
>ARGC_MORAB (Q9K4Z1) N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)| (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase) Length = 336 Score = 28.9 bits (63), Expect = 3.6 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Frame = -2 Query: 179 RESPLIWALAPKAESPLIWAQIGEDLIAFFSVQKL---GHANMVECVN 45 R +P I A+ A L W Q G+DLI ++ L A ++C+N Sbjct: 277 RRTPSIKAVEKTAYYDLAWQQQGQDLIVVSAIDNLLKGAAAQAMQCIN 324
>BGAL_KLEPN (P06219) Beta-galactosidase (EC 3.2.1.23) (Lactase)| Length = 1034 Score = 28.1 bits (61), Expect = 6.1 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Frame = +3 Query: 132 WRFGLR-GEGPNQGRFSYMYVLFPETFPAQSISRLKNSHGPLQFTL 266 W +G G+ PN +F ++FP+ P S+ K++ QFTL Sbjct: 593 WAYGGDFGDKPNDRQFCMNGLVFPDRTPHPSLVEAKHAQQYFQFTL 638
>MDR10_ARATH (Q9SGY1) Multidrug resistance protein 10 (P-glycoprotein 10)| Length = 1316 Score = 27.7 bits (60), Expect = 8.0 Identities = 10/15 (66%), Positives = 12/15 (80%) Frame = -3 Query: 100 LHFFLFKSWDMLIWW 56 LHF LF SW +LIW+ Sbjct: 303 LHFVLFLSWALLIWF 317
>RL19_CHLTR (O84031) 50S ribosomal protein L19| Length = 121 Score = 27.7 bits (60), Expect = 8.0 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = +2 Query: 95 MQLNLLLSGPKSMAIRPSGRGPKSRAILLYVR 190 M+ + LL+ PK ++I RG SRA L Y+R Sbjct: 70 MEKSFLLNSPKIVSIEVVKRGKVSRARLFYLR 101
>RL19_CHLTA (Q3KMZ4) 50S ribosomal protein L19| Length = 121 Score = 27.7 bits (60), Expect = 8.0 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = +2 Query: 95 MQLNLLLSGPKSMAIRPSGRGPKSRAILLYVR 190 M+ + LL+ PK ++I RG SRA L Y+R Sbjct: 70 MEKSFLLNSPKIVSIEVVKRGKVSRARLFYLR 101
>RL19_CHLMU (Q9PL11) 50S ribosomal protein L19| Length = 121 Score = 27.7 bits (60), Expect = 8.0 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = +2 Query: 95 MQLNLLLSGPKSMAIRPSGRGPKSRAILLYVR 190 M+ + LL+ PK ++I RG SRA L Y+R Sbjct: 70 MEKSFLLNSPKVVSIEVVKRGKVSRARLFYLR 101
>C71A9_SOYBN (O81970) Cytochrome P450 71A9 (EC 1.14.-.-) (P450 CP1)| Length = 499 Score = 27.7 bits (60), Expect = 8.0 Identities = 11/19 (57%), Positives = 12/19 (63%) Frame = +3 Query: 204 TFPAQSISRLKNSHGPLQF 260 T P QS+ L N HGPL F Sbjct: 51 TLPHQSLQYLSNKHGPLMF 69 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,620,077 Number of Sequences: 219361 Number of extensions: 925768 Number of successful extensions: 2443 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 2405 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2443 length of database: 80,573,946 effective HSP length: 65 effective length of database: 66,315,481 effective search space used: 1591571544 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)