Clone Name | rbastl28a07 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | emb|AJ966349.1| Hordeum vulgare subsp. vulgare mRNA for lipoxyge... | 353 | 2e-94 | 2 | gb|M63291.1|DROADHDS Drosophila silvestris alcohol dehydrogenase... | 40 | 3.5 |
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>emb|AJ966349.1| Hordeum vulgare subsp. vulgare mRNA for lipoxygenase-like protein (lox gene) Length = 3123 Score = 353 bits (178), Expect = 2e-94 Identities = 198/207 (95%) Strand = Plus / Minus Query: 64 ttagcatgtcccaacttttgaacagnnnnnnntgcaattaaatcttctcctatctgggcc 123 ||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 3109 ttagcatgtcccaacttttgaacagaaaaaaatgcaattaaatcttctcctatctgggcc 3050 Query: 124 caaatcaatggcgattcggccttcggggcgagggcccaaatcaagggcgattctcttata 183 ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| Sbjct: 3049 caaatcaatggcgattcggccttcgtggcgagggcccaaatcaatggcgattctcttata 2990 Query: 184 tgtacgtacttttccctgagacgttcccggcccaaagtatatcgaggctgaaaaattccc 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2989 tgtacgtacttttccctgagacgttcccggcccaaagtatatcgaggctgaaaaattccc 2930 Query: 244 acggtccgcttcaattcactctctgcg 270 ||||||||||||||||||||||||||| Sbjct: 2929 acggtccgcttcaattcactctctgcg 2903
>gb|M63291.1|DROADHDS Drosophila silvestris alcohol dehydrogenase gene, complete cds Length = 1635 Score = 40.1 bits (20), Expect = 3.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 177 tcttatatgtacgtacttttccctgaga 204 |||||| ||||| ||||||||||||||| Sbjct: 189 tcttatttgtacatacttttccctgaga 162 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,664,076 Number of Sequences: 3902068 Number of extensions: 1664076 Number of successful extensions: 24700 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 24695 Number of HSP's gapped (non-prelim): 2 length of query: 270 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 248 effective length of database: 17,147,199,772 effective search space: 4252505543456 effective search space used: 4252505543456 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)