>gb|AC016229.10| Homo sapiens chromosome 18, clone RP11-27G24, complete sequence
          Length = 149787

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 376   aaaaaaccctggaaaccaagcaaatg 401
             |||||||||||||||| |||||||||
Sbjct: 69735 aaaaaaccctggaaacaaagcaaatg 69760

>ref|XM_473065.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2136

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 359 actcatcatcctctgacaaaa 379
           |||||||||||||||||||||
Sbjct: 561 actcatcatcctctgacaaaa 541

>emb|AL356513.15| Human DNA sequence from clone RP11-108A15 on chromosome X Contains the
             3' end of a novel gene similar to Chic1 (LOC349423)and a
             selenophosphate synthetase (SPS) pseudogene, complete
             sequence
          Length = 180619

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 312   acatggatgaaccagaaacca 332
             |||||||||||||||||||||
Sbjct: 44477 acatggatgaaccagaaacca 44457

>gb|AC023725.5| Drosophila melanogaster X BAC RP98-9I10 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 165928

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 200    cacacgcacacaaaattccaa 220
              |||||||||||||||||||||
Sbjct: 109827 cacacgcacacaaaattccaa 109847

>gb|AC175311.1| Medicago truncatula clone mth2-45n8, complete sequence
          Length = 94425

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 7     agttgcaaccttcaaattcaa 27
             |||||||||||||||||||||
Sbjct: 24697 agttgcaaccttcaaattcaa 24717

>gb|AC105352.2| Drosophila melanogaster X BAC RP98-45O17 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 172784

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 200    cacacgcacacaaaattccaa 220
              |||||||||||||||||||||
Sbjct: 144837 cacacgcacacaaaattccaa 144857

>gb|AC107403.6| Drosophila melanogaster X BAC RP98-21M21 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 181831

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 200    cacacgcacacaaaattccaa 220
              |||||||||||||||||||||
Sbjct: 159030 cacacgcacacaaaattccaa 159010

>gb|AC155311.2| Mus musculus BAC clone RP23-407F7 from chromosome 12, complete sequence
          Length = 166104

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 286   ttcttcccatcccaccatcagccta 310
             ||||||||||||||||||| |||||
Sbjct: 79289 ttcttcccatcccaccatctgccta 79313

>gb|AC117792.6| Mus musculus chromosome 8, clone RP24-549A13, complete sequence
          Length = 174210

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 132    cacacagacaatgttgacaac 152
              |||||||||||||||||||||
Sbjct: 137629 cacacagacaatgttgacaac 137609

>gb|AC009533.10| Homo sapiens 12 BAC RP11-22B23 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 162572

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 282    cttcttcttcccatcccacca 302
              |||||||||||||||||||||
Sbjct: 123899 cttcttcttcccatcccacca 123879

>gb|AC010175.4| Homo sapiens 12 BAC RP11-118B22 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 127277

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 282    cttcttcttcccatcccacca 302
              |||||||||||||||||||||
Sbjct: 110895 cttcttcttcccatcccacca 110915

>dbj|AK103837.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033148G19, full
           insert sequence
          Length = 2585

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 359 actcatcatcctctgacaaaa 379
           |||||||||||||||||||||
Sbjct: 655 actcatcatcctctgacaaaa 635

>gb|AE003429.4| Drosophila melanogaster chromosome X, section 13 of 74 of the complete
              sequence
          Length = 326403

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 200    cacacgcacacaaaattccaa 220
              |||||||||||||||||||||
Sbjct: 319584 cacacgcacacaaaattccaa 319564

>gb|AC117187.3| Mus musculus BAC clone RP23-41M4 from 1, complete sequence
          Length = 138404

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 229   agacagatactccacaaagt 248
             ||||||||||||||||||||
Sbjct: 98671 agacagatactccacaaagt 98652

>gb|AC125048.2| Mus musculus BAC clone RP23-364E18 from 5, complete sequence
          Length = 190505

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 206   cacacaaaattccaaaccaaaata 229
             |||||||||||| |||||||||||
Sbjct: 28219 cacacaaaattcaaaaccaaaata 28242

>ref|XM_847720.1| PREDICTED: Canis familiaris similar to centromere protein F
            (350/400kD) (LOC610263), mRNA
          Length = 4350

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 325  agaaaccagcttcatggaca 344
            ||||||||||||||||||||
Sbjct: 2326 agaaaccagcttcatggaca 2345

>emb|AL513489.7| Human DNA sequence from clone RP11-179D21 on chromosome X, complete
             sequence
          Length = 22695

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 376   aaaaaaccctggaaaccaagcaaatgcc 403
             ||||| |||||||||||||||| |||||
Sbjct: 15400 aaaaatccctggaaaccaagcagatgcc 15373

>emb|AL591136.20| Mouse DNA sequence from clone RP23-273P3 on chromosome 11 Contains the
             5' end of a novel gene, two novel genes, the Taok1 gene
             for TAO kinase 1, a eukaryotic translation initiation
             factor 2 subunit 1 alpha (Eif2s1) pseudogene, a ribosomal
             protein S2 (Rps2) pseudogene, the Cryba1 gene for
             crystallin beta A1 and two CpG islands, complete sequence
          Length = 220230

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 123   ataacaacacacacagacaa 142
             ||||||||||||||||||||
Sbjct: 65918 ataacaacacacacagacaa 65937

>gb|AC095036.2| Homo sapiens chromosome 1 clone RP11-320E2, complete sequence
          Length = 191499

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 257    ctgctatatgatttgatttg 276
              ||||||||||||||||||||
Sbjct: 187456 ctgctatatgatttgatttg 187437

>gb|AC092295.2| Homo sapiens chromosome 19 clone CTD-2630F21, complete sequence
          Length = 165566

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 374    acaaaaaaccctggaaacca 393
              ||||||||||||||||||||
Sbjct: 115422 acaaaaaaccctggaaacca 115441

>gb|AC074138.5| Homo sapiens chromosome 19 clone CTD-3234P18, complete sequence
          Length = 200418

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 374   acaaaaaaccctggaaacca 393
             ||||||||||||||||||||
Sbjct: 22691 acaaaaaaccctggaaacca 22710

>gb|AC068945.7| Homo sapiens BAC clone RP11-789C1 from 4, complete sequence
          Length = 219476

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 331    cagcttcatggacacatgac 350
              ||||||||||||||||||||
Sbjct: 114792 cagcttcatggacacatgac 114773

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 206     cacacaaaattccaaaccaaaata 229
               ||||||||| ||||||||||||||
Sbjct: 5782574 cacacaaaaatccaaaccaaaata 5782551

>gb|AC009756.9|AC009756 Homo sapiens, clone RP11-45P2, complete sequence
          Length = 178624

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 374    acaaaaaaccctggaaacca 393
              ||||||||||||||||||||
Sbjct: 120867 acaaaaaaccctggaaacca 120886

>emb|AL672214.8| Mouse DNA sequence from clone RP23-161C9 on chromosome X, complete
             sequence
          Length = 47355

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 259   gctatatgatttgatttggc 278
             ||||||||||||||||||||
Sbjct: 15902 gctatatgatttgatttggc 15921

>dbj|AP005008.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0544H11
          Length = 178376

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 206   cacacaaaattccaaaccaaaata 229
             ||||||||| ||||||||||||||
Sbjct: 12376 cacacaaaaatccaaaccaaaata 12353

>dbj|AP004045.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1135_F06
          Length = 102230

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 206   cacacaaaattccaaaccaaaata 229
             ||||||||| ||||||||||||||
Sbjct: 72088 cacacaaaaatccaaaccaaaata 72065

>emb|AL929019.4| Zebrafish DNA sequence from clone CH211-149L13, complete sequence
          Length = 149316

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 122  aataacaacacacacagaca 141
            ||||||||||||||||||||
Sbjct: 5092 aataacaacacacacagaca 5073

>gb|AE001439.1| Helicobacter pylori J99, complete genome
          Length = 1643831

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 314    atggatgaaccagaaaccag 333
              ||||||||||||||||||||
Sbjct: 328902 atggatgaaccagaaaccag 328883

>emb|AL953903.8| Zebrafish DNA sequence from clone CH211-249G19, complete sequence
          Length = 180436

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 297    ccaccatcagcctacacatg 316
              ||||||||||||||||||||
Sbjct: 107879 ccaccatcagcctacacatg 107898

>gb|AC142100.3| Mus musculus BAC clone RP24-366C18 from 18, complete sequence
          Length = 175110

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 190   agaactcttccacacgcaca 209
             ||||||||||||||||||||
Sbjct: 82753 agaactcttccacacgcaca 82772

>emb|CR407703.23| Zebrafish DNA sequence from clone CH211-141H12 in linkage group 9,
             complete sequence
          Length = 150766

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   aataacaacacacacagaca 141
             ||||||||||||||||||||
Sbjct: 94620 aataacaacacacacagaca 94639


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,214,079
Number of Sequences: 3902068
Number of extensions: 5214079
Number of successful extensions: 100000
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 99929
Number of HSP's gapped (non-prelim): 71
length of query: 421
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 399
effective length of database: 17,147,199,772
effective search space: 6841732709028
effective search space used: 6841732709028
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)