ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl27h09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X67960.1|HVGRP94HO H.vulgare mRNA for GRP94 homologue 577 e-162
2gb|AC091774.7| Oryza sativa chromosome 6 BAC OJ1540_H01 genomic ... 56 7e-05
3dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 56 7e-05
4dbj|AP003769.3| Oryza sativa (japonica cultivar-group) genomic D... 56 7e-05
5dbj|AP003614.2| Oryza sativa (japonica cultivar-group) genomic D... 56 7e-05
6dbj|AK119605.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 7e-05
7dbj|AK102478.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 7e-05
8dbj|AK062023.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 7e-05
9dbj|AB037681.1| Oryza sativa HSP90 mRNA for heat shock protein 9... 56 7e-05
10gb|AC165972.4| Mus musculus BAC clone RP23-87D12 from chromosome... 48 0.016
11ref|XM_590989.2| PREDICTED: Bos taurus similar to Leucine zipper... 46 0.064
12dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, comple... 44 0.25
13gb|AY103537.1| Zea mays PCO098403 mRNA sequence 44 0.25
14gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 44 0.25
15gb|BT016887.1| Zea mays clone Contig720 mRNA sequence 42 0.99
16gb|AE014301.1| Homo sapiens chromosome 13q34 schizophrenia regio... 42 0.99
17emb|AL356778.13| Human DNA sequence from clone RP11-75C5 on chro... 42 0.99
18gb|CP000087.1| Rickettsia bellii RML369-C, complete genome 42 0.99
19gb|AC159477.9| Mus musculus 10 BAC RP23-95I8 (Roswell Park Cance... 42 0.99
20ref|NR_002839.1| Mus musculus distal-less homeobox 6, antisense ... 42 0.99
21ref|XM_219966.3| PREDICTED: Rattus norvegicus programmed cell de... 42 0.99
22gb|AY122633.1| Bodo cf. uncinatus strain ATCC 30904 heat shock p... 42 0.99
23ref|XM_318677.2| Anopheles gambiae str. PEST ENSANGP00000004639 ... 42 0.99
24gb|BT024056.1| Zea mays clone EL01N0440A11 mRNA sequence 42 0.99
25gb|AC147219.5| Mus musculus BAC clone RP23-37K18 from 18, comple... 42 0.99
26gb|AF022079.1|AF022079 Mus musculus antisense Dlx-6 mRNA, partia... 42 0.99
27gb|AC122240.4| Mus musculus BAC clone RP23-145L9 from 6, complet... 42 0.99
28ref|NM_057176.2| Homo sapiens Bartter syndrome, infantile, with ... 40 3.9
29gb|BC103898.1| Homo sapiens Bartter syndrome, infantile, with se... 40 3.9
30gb|BC103900.1| Homo sapiens Bartter syndrome, infantile, with se... 40 3.9
31gb|BC103899.1| Homo sapiens Bartter syndrome, infantile, with se... 40 3.9
32ref|XM_368185.1| Magnaporthe grisea 70-15 chromosome VI hypothet... 40 3.9
33ref|XM_415002.1| PREDICTED: Gallus gallus sodium-calcium exchang... 40 3.9
34gb|AC146297.3| Mus musculus BAC clone RP23-260F15 from chromosom... 40 3.9
35gb|BC069510.1| Homo sapiens cDNA clone IMAGE:7262367, containing... 40 3.9
36gb|AC125049.3| Mus musculus BAC clone RP23-367C15 from chromosom... 40 3.9
37gb|AC115355.3| Mus musculus BAC clone RP23-14J16 from 9, complet... 40 3.9
38emb|AL589790.22| Human DNA sequence from clone GS1-118I5 on chro... 40 3.9
39emb|BX569690.1| Synechococcus sp. WH8102 complete genome; segmen... 40 3.9
40emb|CR860859.1| Pongo pygmaeus mRNA; cDNA DKFZp469H092 (from clo... 40 3.9
41gb|AC007656.2| Homo sapiens 12q22 BAC RPCI11-534P6 (Rowswell Par... 40 3.9
42gb|AY034632.1| Homo sapiens barttin (BSND) mRNA, complete cds 40 3.9
43gb|AC104820.4| Homo sapiens BAC clone RP11-739A13 from 2, comple... 40 3.9
44dbj|AP004735.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.9
45dbj|AP004734.2| Oryza sativa (japonica cultivar-group) genomic D... 40 3.9
46dbj|AK129999.1| Homo sapiens cDNA FLJ26489 fis, clone KDN05855 40 3.9
47gb|AC002460.1|AC002460 Human BAC clone CTB-191D16, complete sequ... 40 3.9
48emb|BX255893.5| Zebrafish DNA sequence from clone CH211-272H10 i... 40 3.9
49gb|AE017221.1| Thermus thermophilus HB27, complete genome 40 3.9
50emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB1... 40 3.9
51emb|AL807382.8| Mouse DNA sequence from clone RP23-434B7 on chro... 40 3.9 
>emb|X67960.1|HVGRP94HO H.vulgare mRNA for GRP94 homologue
          Length = 2682

 Score =  577 bits (291), Expect = e-162
 Identities = 297/299 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1    gcacgctaattccaactagctagggtatcgtcattaaacaagaaactaggtacagtagta 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2681 gcacgctaattccaactagctagggtatcgtcattaaacaagaaactaggtacagtagta 2622

                                                                        
Query: 61   cattacacggacaaaaccccccgtatcacgatcgatgattaatcgtcttccgcgcggtaa 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2621 cattacacggacaaaaccccccgtatcacgatcgatgattaatcgtcttccgcgcggtaa 2562

                                                                        
Query: 121  aaatggacgtccctcaaaaccatcacatttccagtccaacatttctttctaatgaaatga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2561 aaatggacgtccctcaaaaccatcacatttccagtccaacatttctttctaatgaaatga 2502

                                                                        
Query: 181  aagctaaatgggcgatatgagcaactacagctcgtccttgtcgaactgctcgtgttccgg 240
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 2501 aagctaaatgggcgatatgagcaactacagctcgtccttgtcgtactgctcgtgttccgg 2442

                                                                       
Query: 241  ctcctccgcctcctgcttggccgactccttctcctccacctttggctcctccacctcct 299
            ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2441 ctcctccgcctcctgcttggccgactccttctcctccacctctggctcctccacctcct 2383
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>gb|AC091774.7| Oryza sativa chromosome 6 BAC OJ1540_H01 genomic sequence, complete
            sequence
          Length = 143507

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                            
Query: 119  aaaaatggacgtccctcaaaaccatcacattt 150
            ||||||||||||||||| ||||||||||||||
Sbjct: 9409 aaaaatggacgtccctcgaaaccatcacattt 9440
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                                
Query: 119      aaaaatggacgtccctcaaaaccatcacattt 150
                ||||||||||||||||| ||||||||||||||
Sbjct: 29928703 aaaaatggacgtccctcgaaaccatcacattt 29928734



 Score = 40.1 bits (20), Expect = 3.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 236      tccggctcctccgcctcctgcttggccg 263
                ||||||||||||||||||| ||| ||||
Sbjct: 15914667 tccggctcctccgcctcctccttcgccg 15914694
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>dbj|AP003769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0541C02
          Length = 150660

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                            
Query: 119  aaaaatggacgtccctcaaaaccatcacattt 150
            ||||||||||||||||| ||||||||||||||
Sbjct: 4851 aaaaatggacgtccctcgaaaccatcacattt 4882
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>dbj|AP003614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0481E08
          Length = 171965

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                              
Query: 119    aaaaatggacgtccctcaaaaccatcacattt 150
              ||||||||||||||||| ||||||||||||||
Sbjct: 124216 aaaaatggacgtccctcgaaaccatcacattt 124247
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>dbj|AK119605.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-F01, full
            insert sequence
          Length = 1944

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 119  aaaaatggacgtccctcaaaaccatcacattt 150
            ||||||||||||||||| ||||||||||||||
Sbjct: 1848 aaaaatggacgtccctcgaaaccatcacattt 1817
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>dbj|AK102478.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094I10, full
            insert sequence
          Length = 2708

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 119  aaaaatggacgtccctcaaaaccatcacattt 150
            ||||||||||||||||| ||||||||||||||
Sbjct: 2608 aaaaatggacgtccctcgaaaccatcacattt 2577
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>dbj|AK062023.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-G02, full
            insert sequence
          Length = 2026

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 119  aaaaatggacgtccctcaaaaccatcacattt 150
            ||||||||||||||||| ||||||||||||||
Sbjct: 1930 aaaaatggacgtccctcgaaaccatcacattt 1899
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>dbj|AB037681.1| Oryza sativa HSP90 mRNA for heat shock protein 90, complete cds
          Length = 2731

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 119  aaaaatggacgtccctcaaaaccatcacattt 150
            ||||||||||||||||| ||||||||||||||
Sbjct: 2602 aaaaatggacgtccctcgaaaccatcacattt 2571
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>gb|AC165972.4| Mus musculus BAC clone RP23-87D12 from chromosome 17, complete sequence
          Length = 199737

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                              
Query: 226    ctgctcgtgttccggctcctccgcctcctgct 257
              |||||| ||||||||||||||| |||||||||
Sbjct: 178788 ctgctcctgttccggctcctcctcctcctgct 178819
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>ref|XM_590989.2| PREDICTED: Bos taurus similar to Leucine zipper-EF-hand containing
            transmembrane protein 1, mitochondrial precursor
            (LOC513324), mRNA
          Length = 2388

 Score = 46.1 bits (23), Expect = 0.064
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 244  ctccgcctcctgcttggccgactccttctcctccacctt 282
            |||||||| || |||||||  ||||||||||||||||||
Sbjct: 2226 ctccgccttctccttggccttctccttctcctccacctt 2188
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>dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, complete genome
          Length = 2685015

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 161     atttctttctaatgaaatgaaa 182
               ||||||||||||||||||||||
Sbjct: 1261169 atttctttctaatgaaatgaaa 1261148
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>gb|AY103537.1| Zea mays PCO098403 mRNA sequence
          Length = 2806

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 204  actacagctcgtccttgtcgaa 225
            ||||||||||||||||||||||
Sbjct: 2503 actacagctcgtccttgtcgaa 2482
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 241     ctcctccgcctcctgcttggcc 262
               ||||||||||||||||||||||
Sbjct: 2035901 ctcctccgcctcctgcttggcc 2035922
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>gb|BT016887.1| Zea mays clone Contig720 mRNA sequence
          Length = 719

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 205 ctacagctcgtccttgtcgaa 225
           |||||||||||||||||||||
Sbjct: 239 ctacagctcgtccttgtcgaa 259
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>gb|AE014301.1| Homo sapiens chromosome 13q34 schizophrenia region contig 2 section 1
             of 3 of the complete sequence
          Length = 106598

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 270   tctcctccacctttggctcct 290
             |||||||||||||||||||||
Sbjct: 46220 tctcctccacctttggctcct 46200
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>emb|AL356778.13| Human DNA sequence from clone RP11-75C5 on chromosome 13 Contains the
             5' end of the gene for a novel protein (ortholog of rat
             putative four repeat ion channel) and a CpG island,
             complete sequence
          Length = 87397

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 270   tctcctccacctttggctcct 290
             |||||||||||||||||||||
Sbjct: 49913 tctcctccacctttggctcct 49893
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>gb|CP000087.1| Rickettsia bellii RML369-C, complete genome
          Length = 1522076

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 169     ctaatgaaatgaaagctaaat 189
               |||||||||||||||||||||
Sbjct: 1421262 ctaatgaaatgaaagctaaat 1421242
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>gb|AC159477.9| Mus musculus 10 BAC RP23-95I8 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 222553

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 167    ttctaatgaaatgaaagctaa 187
              |||||||||||||||||||||
Sbjct: 112594 ttctaatgaaatgaaagctaa 112614
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>ref|NR_002839.1| Mus musculus distal-less homeobox 6, antisense (Dlx6as) on chromosome
            6
          Length = 1351

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 239  ggctcctccgcctcctgcttg 259
            |||||||||||||||||||||
Sbjct: 1084 ggctcctccgcctcctgcttg 1064
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>ref|XM_219966.3| PREDICTED: Rattus norvegicus programmed cell death protein 11
            (predicted) (Pdcd11_predicted), mRNA
          Length = 5921

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 277  cacctttggctcctccacctc 297
            |||||||||||||||||||||
Sbjct: 4473 cacctttggctcctccacctc 4453
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>gb|AY122633.1| Bodo cf. uncinatus strain ATCC 30904 heat shock protein 90 (HSP-90)
           gene, partial cds
          Length = 1915

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 271 ctcctccacctttggctcctccacctcct 299
           |||||||||||| ||||||||| ||||||
Sbjct: 643 ctcctccaccttcggctcctcctcctcct 615
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>ref|XM_318677.2| Anopheles gambiae str. PEST ENSANGP00000004639 (ENSANGG00000003636),
            partial mRNA
          Length = 3264

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 243  cctccgcctcctgcttggccg 263
            |||||||||||||||||||||
Sbjct: 1432 cctccgcctcctgcttggccg 1412
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>gb|BT024056.1| Zea mays clone EL01N0440A11 mRNA sequence
          Length = 2511

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 205  ctacagctcgtccttgtcgaa 225
            |||||||||||||||||||||
Sbjct: 2272 ctacagctcgtccttgtcgaa 2252
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>gb|AC147219.5| Mus musculus BAC clone RP23-37K18 from 18, complete sequence
          Length = 183177

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 138    aaccatcacatttccagtcca 158
              |||||||||||||||||||||
Sbjct: 132650 aaccatcacatttccagtcca 132630
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>gb|AF022079.1|AF022079 Mus musculus antisense Dlx-6 mRNA, partial sequence
          Length = 1351

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 239  ggctcctccgcctcctgcttg 259
            |||||||||||||||||||||
Sbjct: 1084 ggctcctccgcctcctgcttg 1064
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>gb|AC122240.4| Mus musculus BAC clone RP23-145L9 from 6, complete sequence
          Length = 211740

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 239    ggctcctccgcctcctgcttg 259
              |||||||||||||||||||||
Sbjct: 107299 ggctcctccgcctcctgcttg 107319
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>ref|NM_057176.2| Homo sapiens Bartter syndrome, infantile, with sensorineural deafness
            (Barttin) (BSND), mRNA
          Length = 1396

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 265  ctccttctcctccacctttg 284
            ||||||||||||||||||||
Sbjct: 1080 ctccttctcctccacctttg 1061
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>gb|BC103898.1| Homo sapiens Bartter syndrome, infantile, with sensorineural deafness
            (Barttin), mRNA (cDNA clone MGC:119283 IMAGE:40005137),
            complete cds
          Length = 1338

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 265  ctccttctcctccacctttg 284
            ||||||||||||||||||||
Sbjct: 1059 ctccttctcctccacctttg 1040
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>gb|BC103900.1| Homo sapiens Bartter syndrome, infantile, with sensorineural deafness
            (Barttin), mRNA (cDNA clone MGC:119285 IMAGE:40005139),
            complete cds
          Length = 1338

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 265  ctccttctcctccacctttg 284
            ||||||||||||||||||||
Sbjct: 1059 ctccttctcctccacctttg 1040
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>gb|BC103899.1| Homo sapiens Bartter syndrome, infantile, with sensorineural deafness
            (Barttin), mRNA (cDNA clone MGC:119284 IMAGE:40005138),
            complete cds
          Length = 1338

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 265  ctccttctcctccacctttg 284
            ||||||||||||||||||||
Sbjct: 1059 ctccttctcctccacctttg 1040
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>ref|XM_368185.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein
           (MG01059.4) partial mRNA
          Length = 1074

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 249 cctcctgcttggccgactccttctcctc 276
           |||||| |||||||| ||||||||||||
Sbjct: 937 cctccttcttggccgcctccttctcctc 910
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>ref|XM_415002.1| PREDICTED: Gallus gallus sodium-calcium exchanger (NCX1), mRNA
          Length = 5274

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 268  cttctcctccacctttggct 287
            ||||||||||||||||||||
Sbjct: 2194 cttctcctccacctttggct 2175
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>gb|AC146297.3| Mus musculus BAC clone RP23-260F15 from chromosome 9, complete sequence
          Length = 176549

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 44    aactaggtacagtagtacat 63
             ||||||||||||||||||||
Sbjct: 13547 aactaggtacagtagtacat 13528
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>gb|BC069510.1| Homo sapiens cDNA clone IMAGE:7262367, containing frame-shift
           errors
          Length = 1099

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 265 ctccttctcctccacctttg 284
           ||||||||||||||||||||
Sbjct: 904 ctccttctcctccacctttg 885
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>gb|AC125049.3| Mus musculus BAC clone RP23-367C15 from chromosome 9, complete sequence
          Length = 211511

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    tcattaaacaagaaactagg 50
             ||||||||||||||||||||
Sbjct: 83603 tcattaaacaagaaactagg 83584
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>gb|AC115355.3| Mus musculus BAC clone RP23-14J16 from 9, complete sequence
          Length = 179362

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 44     aactaggtacagtagtacat 63
              ||||||||||||||||||||
Sbjct: 148078 aactaggtacagtagtacat 148059
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>emb|AL589790.22| Human DNA sequence from clone GS1-118I5 on chromosome 1 Contains the
            3' end of the gene for barttin (BSND) and the 5' end of
            the PCSK9 gene for proprotein convertase subtilisin/kexin
            type 9, complete sequence
          Length = 46075

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 265  ctccttctcctccacctttg 284
            ||||||||||||||||||||
Sbjct: 8377 ctccttctcctccacctttg 8358
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>emb|BX569690.1| Synechococcus sp. WH8102 complete genome; segment 2/7
          Length = 349652

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 208  cagctcgtccttgtcgaact 227
            ||||||||||||||||||||
Sbjct: 5109 cagctcgtccttgtcgaact 5128
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>emb|CR860859.1| Pongo pygmaeus mRNA; cDNA DKFZp469H092 (from clone DKFZp469H092)
          Length = 3506

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 265  ctccttctcctccacctttg 284
            ||||||||||||||||||||
Sbjct: 1114 ctccttctcctccacctttg 1095
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>gb|AC007656.2| Homo sapiens 12q22 BAC RPCI11-534P6 (Rowswell Park Cancer Institute
             Human BAC Library) complete sequence
          Length = 171236

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 171   aatgaaatgaaagctaaatg 190
             ||||||||||||||||||||
Sbjct: 60679 aatgaaatgaaagctaaatg 60698
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>gb|AY034632.1| Homo sapiens barttin (BSND) mRNA, complete cds
          Length = 1396

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 265  ctccttctcctccacctttg 284
            ||||||||||||||||||||
Sbjct: 1080 ctccttctcctccacctttg 1061
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>gb|AC104820.4| Homo sapiens BAC clone RP11-739A13 from 2, complete sequence
          Length = 161786

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 169   ctaatgaaatgaaagctaaatggg 192
             ||||||||| ||||||||||||||
Sbjct: 22238 ctaatgaaaagaaagctaaatggg 22261
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>dbj|AP004735.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0031P18
          Length = 156535

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 236   tccggctcctccgcctcctgcttggccg 263
             ||||||||||||||||||| ||| ||||
Sbjct: 48116 tccggctcctccgcctcctccttcgccg 48143
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>dbj|AP004734.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0026P23
          Length = 180188

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 236    tccggctcctccgcctcctgcttggccg 263
              ||||||||||||||||||| ||| ||||
Sbjct: 127670 tccggctcctccgcctcctccttcgccg 127697
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>dbj|AK129999.1| Homo sapiens cDNA FLJ26489 fis, clone KDN05855
          Length = 1930

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 265  ctccttctcctccacctttg 284
            ||||||||||||||||||||
Sbjct: 1091 ctccttctcctccacctttg 1072
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>gb|AC002460.1|AC002460 Human BAC clone CTB-191D16, complete sequence
          Length = 174952

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 169   ctaatgaaatgaaagctaaa 188
             ||||||||||||||||||||
Sbjct: 56061 ctaatgaaatgaaagctaaa 56080
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>emb|BX255893.5| Zebrafish DNA sequence from clone CH211-272H10 in linkage group 4,
             complete sequence
          Length = 99176

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 146   catttccagtccaacatttc 165
             ||||||||||||||||||||
Sbjct: 21017 catttccagtccaacatttc 21036
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 241     ctcctccgcctcctgcttgg 260
               ||||||||||||||||||||
Sbjct: 1682827 ctcctccgcctcctgcttgg 1682846
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>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica
          Length = 3066374

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 272    tcctccacctttggctcctc 291
              ||||||||||||||||||||
Sbjct: 401826 tcctccacctttggctcctc 401807
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>emb|AL807382.8| Mouse DNA sequence from clone RP23-434B7 on chromosome 4, complete
             sequence
          Length = 190179

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 44    aactaggtacagtagtacat 63
             ||||||||||||||||||||
Sbjct: 70193 aactaggtacagtagtacat 70212


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,244,690
Number of Sequences: 3902068
Number of extensions: 3244690
Number of successful extensions: 67591
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67333
Number of HSP's gapped (non-prelim): 258
length of query: 299
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 277
effective length of database: 17,147,199,772
effective search space: 4749774336844
effective search space used: 4749774336844
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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