Clone Name | rbastl27h06 |
---|---|
Clone Library Name | barley_pub |
>gb|AY220737.1| Hordeum vulgare lipoxygenase 1 protein (LOXA) mRNA, partial cds Length = 1331 Score = 555 bits (280), Expect = e-155 Identities = 280/280 (100%) Strand = Plus / Minus Query: 1 ggaagcaaatctgctttatttattcggcttaaagagcaactgctgacatagtactgtcac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1228 ggaagcaaatctgctttatttattcggcttaaagagcaactgctgacatagtactgtcac 1169 Query: 61 agacacacactacaccaatctctcgacaagtttcgtacgtggcgaacgccctttattcat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1168 agacacacactacaccaatctctcgacaagtttcgtacgtggcgaacgccctttattcat 1109 Query: 121 ccatggttgccgatggcttaaattagatggagatgctgttggggatgcccttggcggtaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1108 ccatggttgccgatggcttaaattagatggagatgctgttggggatgcccttggcggtaa 1049 Query: 181 gcccggcagcggcgcccttgtggtcggaggtgttggggtagagcagcatgtagggaaact 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1048 gcccggcagcggcgcccttgtggtcggaggtgttggggtagagcagcatgtagggaaact 989 Query: 241 tagccgggccgttgcggttcttgagctccgggtcatggtt 280 |||||||||||||||||||||||||||||||||||||||| Sbjct: 988 tagccgggccgttgcggttcttgagctccgggtcatggtt 949
>gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds Length = 2818 Score = 547 bits (276), Expect = e-153 Identities = 279/280 (99%) Strand = Plus / Minus Query: 1 ggaagcaaatctgctttatttattcggcttaaagagcaactgctgacatagtactgtcac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2799 ggaagcaaatctgctttatttattcggcttaaagagcaactgctgacatagtactgtcac 2740 Query: 61 agacacacactacaccaatctctcgacaagtttcgtacgtggcgaacgccctttattcat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2739 agacacacactacaccaatctctcgacaagtttcgtacgtggcgaacgccctttattcat 2680 Query: 121 ccatggttgccgatggcttaaattagatggagatgctgttggggatgcccttggcggtaa 180 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 2679 ccatggttgccgatggcttagattagatggagatgctgttggggatgcccttggcggtaa 2620 Query: 181 gcccggcagcggcgcccttgtggtcggaggtgttggggtagagcagcatgtagggaaact 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2619 gcccggcagcggcgcccttgtggtcggaggtgttggggtagagcagcatgtagggaaact 2560 Query: 241 tagccgggccgttgcggttcttgagctccgggtcatggtt 280 |||||||||||||||||||||||||||||||||||||||| Sbjct: 2559 tagccgggccgttgcggttcttgagctccgggtcatggtt 2520
>gb|BT008992.1| Triticum aestivum clone wdk2c.pk011.j13:fis, full insert mRNA sequence Length = 1020 Score = 167 bits (84), Expect = 2e-38 Identities = 108/116 (93%) Strand = Plus / Minus Query: 145 agatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 204 |||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||| | Sbjct: 751 agatggagatgctgttggggatgcccttagcggtgagcccggcggcggcgcccttgtgat 692 Query: 205 cggaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttc 260 ||||||||||||||||||||| ||||||||| ||||| ||||| |||||||||||| Sbjct: 691 cggaggtgttggggtagagcaacatgtaggggaacttggccggaccgttgcggttc 636
>gb|AY720897.2| Triticum aestivum lipoxygenase gene, partial sequence Length = 934 Score = 135 bits (68), Expect = 8e-29 Identities = 98/108 (90%) Strand = Plus / Plus Query: 153 atgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcggaggtg 212 |||||||||||||||||||||||||| || ||||| ||||| ||||||||||| ||||| Sbjct: 1 atgctgttggggatgcccttggcggtgaggccggcggcggcacccttgtggtcttaggtg 60 Query: 213 ttggggtagagcagcatgtagggaaacttagccgggccgttgcggttc 260 || |||||||||||||||||||| | ||| |||||||||||||||||| Sbjct: 61 ttagggtagagcagcatgtaggggagcttggccgggccgttgcggttc 108
>gb|BT009097.1| Triticum aestivum clone wkm2c.pk005.n2:fis, full insert mRNA sequence Length = 1129 Score = 131 bits (66), Expect = 1e-27 Identities = 108/122 (88%) Strand = Plus / Minus Query: 145 agatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 204 |||||||||||||||||||||||||| |||| || ||||| | || |||| |||||| Sbjct: 904 agatggagatgctgttggggatgcccctggccgtgagcccctcggcctggcccgtgtggt 845 Query: 205 cggaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttga 264 ||||||||||||||||||||||||||||||| ||||| ||||| ||| |||||||||||| Sbjct: 844 cggaggtgttggggtagagcagcatgtaggggaacttggccggcccggtgcggttcttga 785 Query: 265 gc 266 || Sbjct: 784 gc 783
>gb|AF149803.1|AF149803 Zea mays lipoxygenase mRNA, lipoxygenase-L2 allele, partial cds Length = 2267 Score = 131 bits (66), Expect = 1e-27 Identities = 114/130 (87%) Strand = Plus / Minus Query: 145 agatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 204 ||||||||||||||||||||||||||||||| || ||||| || |||||||| |||||| Sbjct: 2062 agatggagatgctgttggggatgcccttggcagtgagccctgcggcggcgccactgtggt 2003 Query: 205 cggaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttga 264 | ||||||||||||||||||||||||||||| |||| || |||||||| | |||| | | Sbjct: 2002 cagaggtgttggggtagagcagcatgtaggggaactcggcggggccgttcctgttcctca 1943 Query: 265 gctccgggtc 274 ||| |||||| Sbjct: 1942 gctgcgggtc 1933
>gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complete cds Length = 2845 Score = 125 bits (63), Expect = 8e-26 Identities = 105/119 (88%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 |||||||||||||| || |||||||||||||| | ||||| ||| ||||||| |||| Sbjct: 2618 atggagatgctgtttggaatgcccttggcggtgatgccggcggcgtcgcccttcgtgtcg 2559 Query: 207 gaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgag 265 ||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||| Sbjct: 2558 gaggtgttggggtagagcagcgtgtaggggaactcggccgggccgttgcggttcttgag 2500
>gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds Length = 5013 Score = 123 bits (62), Expect = 3e-25 Identities = 113/130 (86%) Strand = Plus / Minus Query: 145 agatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 204 ||||||||||||||||||||||||||||||| || ||||| || |||||||| |||||| Sbjct: 4660 agatggagatgctgttggggatgcccttggcagtgagccctgcggcggcgccactgtggt 4601 Query: 205 cggaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttga 264 | ||||||||||| ||||||||||||||||| |||| || |||||||| | |||| | | Sbjct: 4600 cagaggtgttgggatagagcagcatgtaggggaactcggcggggccgttcctgttcctca 4541 Query: 265 gctccgggtc 274 ||| |||||| Sbjct: 4540 gctgcgggtc 4531
>gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds Length = 2595 Score = 123 bits (62), Expect = 3e-25 Identities = 113/130 (86%) Strand = Plus / Minus Query: 145 agatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 204 ||||||||||||||||||||||||||||||| || ||||| || |||||||| |||||| Sbjct: 2593 agatggagatgctgttggggatgcccttggcagtgagccctgcggcggcgccactgtggt 2534 Query: 205 cggaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttga 264 | ||||||||||| ||||||||||||||||| |||| || |||||||| | |||| | | Sbjct: 2533 cagaggtgttgggatagagcagcatgtaggggaactcggcggggccgttcctgttcctca 2474 Query: 265 gctccgggtc 274 ||| |||||| Sbjct: 2473 gctgcgggtc 2464
>gb|DQ428248.1| Sorghum propinquum locus PRC0271 genomic sequence Length = 810 Score = 121 bits (61), Expect = 1e-24 Identities = 106/121 (87%) Strand = Plus / Minus Query: 145 agatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 204 |||||||||||||||| || |||||||||||||| | ||||| || |||| || | || Sbjct: 794 agatggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgt 735 Query: 205 cggaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttga 264 ||||||||||||||||||||||| ||||||| ||||| ||||| |||||||||||||||| Sbjct: 734 cggaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttga 675 Query: 265 g 265 | Sbjct: 674 g 674
>gb|DQ428247.1| Sorghum bicolor voucher PI585454 locus PRC0271 genomic sequence Length = 805 Score = 121 bits (61), Expect = 1e-24 Identities = 106/121 (87%) Strand = Plus / Minus Query: 145 agatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 204 |||||||||||||||| || |||||||||||||| | ||||| || |||| || | || Sbjct: 789 agatggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgt 730 Query: 205 cggaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttga 264 ||||||||||||||||||||||| ||||||| ||||| ||||| |||||||||||||||| Sbjct: 729 cggaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttga 670 Query: 265 g 265 | Sbjct: 669 g 669
>gb|DQ428246.1| Sorghum bicolor voucher PI267539 locus PRC0271 genomic sequence Length = 805 Score = 121 bits (61), Expect = 1e-24 Identities = 106/121 (87%) Strand = Plus / Minus Query: 145 agatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 204 |||||||||||||||| || |||||||||||||| | ||||| || |||| || | || Sbjct: 789 agatggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgt 730 Query: 205 cggaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttga 264 ||||||||||||||||||||||| ||||||| ||||| ||||| |||||||||||||||| Sbjct: 729 cggaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttga 670 Query: 265 g 265 | Sbjct: 669 g 669
>gb|DQ428245.1| Sorghum bicolor voucher PI267408 locus PRC0271 genomic sequence Length = 805 Score = 121 bits (61), Expect = 1e-24 Identities = 106/121 (87%) Strand = Plus / Minus Query: 145 agatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 204 |||||||||||||||| || |||||||||||||| | ||||| || |||| || | || Sbjct: 789 agatggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgt 730 Query: 205 cggaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttga 264 ||||||||||||||||||||||| ||||||| ||||| ||||| |||||||||||||||| Sbjct: 729 cggaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttga 670 Query: 265 g 265 | Sbjct: 669 g 669
>gb|DQ428244.1| Sorghum bicolor voucher PI221607 locus PRC0271 genomic sequence Length = 805 Score = 121 bits (61), Expect = 1e-24 Identities = 106/121 (87%) Strand = Plus / Minus Query: 145 agatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 204 |||||||||||||||| || |||||||||||||| | ||||| || |||| || | || Sbjct: 789 agatggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgt 730 Query: 205 cggaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttga 264 ||||||||||||||||||||||| ||||||| ||||| ||||| |||||||||||||||| Sbjct: 729 cggaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttga 670 Query: 265 g 265 | Sbjct: 669 g 669
>gb|DQ428243.1| Sorghum bicolor voucher PI152702 locus PRC0271 genomic sequence Length = 805 Score = 121 bits (61), Expect = 1e-24 Identities = 106/121 (87%) Strand = Plus / Minus Query: 145 agatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 204 |||||||||||||||| || |||||||||||||| | ||||| || |||| || | || Sbjct: 789 agatggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgt 730 Query: 205 cggaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttga 264 ||||||||||||||||||||||| ||||||| ||||| ||||| |||||||||||||||| Sbjct: 729 cggaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttga 670 Query: 265 g 265 | Sbjct: 669 g 669
>gb|DQ428242.1| Sorghum bicolor voucher NSL92371 locus PRC0271 genomic sequence Length = 805 Score = 121 bits (61), Expect = 1e-24 Identities = 106/121 (87%) Strand = Plus / Minus Query: 145 agatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 204 |||||||||||||||| || |||||||||||||| | ||||| || |||| || | || Sbjct: 789 agatggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgt 730 Query: 205 cggaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttga 264 ||||||||||||||||||||||| ||||||| ||||| ||||| |||||||||||||||| Sbjct: 729 cggaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttga 670 Query: 265 g 265 | Sbjct: 669 g 669
>gb|DQ428241.1| Sorghum bicolor voucher NSL87902 locus PRC0271 genomic sequence Length = 805 Score = 121 bits (61), Expect = 1e-24 Identities = 106/121 (87%) Strand = Plus / Minus Query: 145 agatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 204 |||||||||||||||| || |||||||||||||| | ||||| || |||| || | || Sbjct: 789 agatggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgt 730 Query: 205 cggaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttga 264 ||||||||||||||||||||||| ||||||| ||||| ||||| |||||||||||||||| Sbjct: 729 cggaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttga 670 Query: 265 g 265 | Sbjct: 669 g 669
>gb|DQ428240.1| Sorghum bicolor voucher NSL87666 locus PRC0271 genomic sequence Length = 805 Score = 121 bits (61), Expect = 1e-24 Identities = 106/121 (87%) Strand = Plus / Minus Query: 145 agatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 204 |||||||||||||||| || |||||||||||||| | ||||| || |||| || | || Sbjct: 789 agatggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgt 730 Query: 205 cggaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttga 264 ||||||||||||||||||||||| ||||||| ||||| ||||| |||||||||||||||| Sbjct: 729 cggaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttga 670 Query: 265 g 265 | Sbjct: 669 g 669
>gb|DQ428239.1| Sorghum bicolor voucher NSL77217 locus PRC0271 genomic sequence Length = 805 Score = 121 bits (61), Expect = 1e-24 Identities = 106/121 (87%) Strand = Plus / Minus Query: 145 agatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 204 |||||||||||||||| || |||||||||||||| | ||||| || |||| || | || Sbjct: 789 agatggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgt 730 Query: 205 cggaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttga 264 ||||||||||||||||||||||| ||||||| ||||| ||||| |||||||||||||||| Sbjct: 729 cggaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttga 670 Query: 265 g 265 | Sbjct: 669 g 669
>gb|DQ428238.1| Sorghum bicolor voucher NSL77034 locus PRC0271 genomic sequence Length = 805 Score = 121 bits (61), Expect = 1e-24 Identities = 106/121 (87%) Strand = Plus / Minus Query: 145 agatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 204 |||||||||||||||| || |||||||||||||| | ||||| || |||| || | || Sbjct: 789 agatggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgt 730 Query: 205 cggaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttga 264 ||||||||||||||||||||||| ||||||| ||||| ||||| |||||||||||||||| Sbjct: 729 cggaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttga 670 Query: 265 g 265 | Sbjct: 669 g 669
>gb|DQ428237.1| Sorghum bicolor voucher NSL55243 locus PRC0271 genomic sequence Length = 805 Score = 121 bits (61), Expect = 1e-24 Identities = 106/121 (87%) Strand = Plus / Minus Query: 145 agatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 204 |||||||||||||||| || |||||||||||||| | ||||| || |||| || | || Sbjct: 789 agatggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgt 730 Query: 205 cggaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttga 264 ||||||||||||||||||||||| ||||||| ||||| ||||| |||||||||||||||| Sbjct: 729 cggaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttga 670 Query: 265 g 265 | Sbjct: 669 g 669
>gb|DQ428236.1| Sorghum bicolor voucher NSL51365 locus PRC0271 genomic sequence Length = 805 Score = 121 bits (61), Expect = 1e-24 Identities = 106/121 (87%) Strand = Plus / Minus Query: 145 agatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 204 |||||||||||||||| || |||||||||||||| | ||||| || |||| || | || Sbjct: 789 agatggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgt 730 Query: 205 cggaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttga 264 ||||||||||||||||||||||| ||||||| ||||| ||||| |||||||||||||||| Sbjct: 729 cggaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttga 670 Query: 265 g 265 | Sbjct: 669 g 669
>gb|DQ428235.1| Sorghum bicolor voucher NSL51030 locus PRC0271 genomic sequence Length = 805 Score = 121 bits (61), Expect = 1e-24 Identities = 106/121 (87%) Strand = Plus / Minus Query: 145 agatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 204 |||||||||||||||| || |||||||||||||| | ||||| || |||| || | || Sbjct: 789 agatggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgt 730 Query: 205 cggaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttga 264 ||||||||||||||||||||||| ||||||| ||||| ||||| |||||||||||||||| Sbjct: 729 cggaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttga 670 Query: 265 g 265 | Sbjct: 669 g 669
>gb|DQ428234.1| Sorghum bicolor voucher BTx623 locus PRC0271 genomic sequence Length = 805 Score = 121 bits (61), Expect = 1e-24 Identities = 106/121 (87%) Strand = Plus / Minus Query: 145 agatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 204 |||||||||||||||| || |||||||||||||| | ||||| || |||| || | || Sbjct: 789 agatggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgt 730 Query: 205 cggaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttga 264 ||||||||||||||||||||||| ||||||| ||||| ||||| |||||||||||||||| Sbjct: 729 cggaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttga 670 Query: 265 g 265 | Sbjct: 669 g 669
>ref|XM_469655.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2613 Score = 117 bits (59), Expect = 2e-23 Identities = 83/91 (91%) Strand = Plus / Minus Query: 145 agatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 204 |||||||||||||||||||||||||| |||||| || ||||||||| |||||||| ||| Sbjct: 2611 agatggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttgaggt 2552 Query: 205 cggaggtgttggggtagagcagcatgtaggg 235 |||||||||| |||||||||||| ||||||| Sbjct: 2551 cggaggtgtttgggtagagcagcgtgtaggg 2521
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 117 bits (59), Expect = 2e-23 Identities = 83/91 (91%) Strand = Plus / Minus Query: 145 agatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 204 |||||||||||||||||||||||||| |||||| || ||||||||| |||||||| ||| Sbjct: 30026447 agatggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttgaggt 30026388 Query: 205 cggaggtgttggggtagagcagcatgtaggg 235 |||||||||| |||||||||||| ||||||| Sbjct: 30026387 cggaggtgtttgggtagagcagcgtgtaggg 30026357 Score = 115 bits (58), Expect = 8e-23 Identities = 106/122 (86%) Strand = Plus / Minus Query: 145 agatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 204 |||| ||||||||||||||||||||||||||||| | ||||| |||||||| || || Sbjct: 27803105 agatcgagatgctgttggggatgcccttggcggtgatgccggcggcggcgccggtgacgt 27803046 Query: 205 cggaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttga 264 |||||||||||||||| ||||||||||| || |||| || ||||| ||||||||||||| Sbjct: 27803045 cggaggtgttggggtaaagcagcatgtatgggaactcggctgggccattgcggttcttga 27802986 Query: 265 gc 266 || Sbjct: 27802985 gc 27802984 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 145 agatggagatgctgttggggatgcccttggcggtaagccc 184 |||||||||||||||||||||||||| ||||||| ||||| Sbjct: 27821684 agatggagatgctgttggggatgcccatggcggtgagccc 27821645 Score = 50.1 bits (25), Expect = 0.004 Identities = 49/57 (85%) Strand = Plus / Minus Query: 210 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| Sbjct: 27821616 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 27821560 Score = 44.1 bits (22), Expect = 0.23 Identities = 25/26 (96%) Strand = Plus / Plus Query: 147 atggagatgctgttggggatgccctt 172 |||| ||||||||||||||||||||| Sbjct: 14300022 atggtgatgctgttggggatgccctt 14300047
>emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2 Length = 2830 Score = 117 bits (59), Expect = 2e-23 Identities = 83/91 (91%) Strand = Plus / Minus Query: 145 agatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 204 |||||||||||||||||||||||||| |||||| || ||||||||| |||||||| ||| Sbjct: 2693 agatggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttgaggt 2634 Query: 205 cggaggtgttggggtagagcagcatgtaggg 235 |||||||||| |||||||||||| ||||||| Sbjct: 2633 cggaggtgtttgggtagagcagcgtgtaggg 2603
>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete sequence Length = 155106 Score = 117 bits (59), Expect = 2e-23 Identities = 83/91 (91%) Strand = Plus / Plus Query: 145 agatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 204 |||||||||||||||||||||||||| |||||| || ||||||||| |||||||| ||| Sbjct: 81304 agatggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttgaggt 81363 Query: 205 cggaggtgttggggtagagcagcatgtaggg 235 |||||||||| |||||||||||| ||||||| Sbjct: 81364 cggaggtgtttgggtagagcagcgtgtaggg 81394
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 117 bits (59), Expect = 2e-23 Identities = 83/91 (91%) Strand = Plus / Minus Query: 145 agatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 204 |||||||||||||||||||||||||| |||||| || ||||||||| |||||||| ||| Sbjct: 30117869 agatggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttgaggt 30117810 Query: 205 cggaggtgttggggtagagcagcatgtaggg 235 |||||||||| |||||||||||| ||||||| Sbjct: 30117809 cggaggtgtttgggtagagcagcgtgtaggg 30117779 Score = 115 bits (58), Expect = 8e-23 Identities = 106/122 (86%) Strand = Plus / Minus Query: 145 agatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 204 |||| ||||||||||||||||||||||||||||| | ||||| |||||||| || || Sbjct: 27894429 agatcgagatgctgttggggatgcccttggcggtgatgccggcggcggcgccggtgacgt 27894370 Query: 205 cggaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttga 264 |||||||||||||||| ||||||||||| || |||| || ||||| ||||||||||||| Sbjct: 27894369 cggaggtgttggggtaaagcagcatgtatgggaactcggctgggccattgcggttcttga 27894310 Query: 265 gc 266 || Sbjct: 27894309 gc 27894308 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 145 agatggagatgctgttggggatgcccttggcggtaagccc 184 |||||||||||||||||||||||||| ||||||| ||||| Sbjct: 27913008 agatggagatgctgttggggatgcccatggcggtgagccc 27912969 Score = 50.1 bits (25), Expect = 0.004 Identities = 49/57 (85%) Strand = Plus / Minus Query: 210 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| Sbjct: 27912940 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 27912884 Score = 44.1 bits (22), Expect = 0.23 Identities = 25/26 (96%) Strand = Plus / Plus Query: 147 atggagatgctgttggggatgccctt 172 |||| ||||||||||||||||||||| Sbjct: 14294997 atggtgatgctgttggggatgccctt 14295022
>dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046E17, full insert sequence Length = 2928 Score = 117 bits (59), Expect = 2e-23 Identities = 83/91 (91%) Strand = Plus / Minus Query: 145 agatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 204 |||||||||||||||||||||||||| |||||| || ||||||||| |||||||| ||| Sbjct: 2726 agatggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttgaggt 2667 Query: 205 cggaggtgttggggtagagcagcatgtaggg 235 |||||||||| |||||||||||| ||||||| Sbjct: 2666 cggaggtgtttgggtagagcagcgtgtaggg 2636
>ref|XM_469409.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2601 Score = 115 bits (58), Expect = 8e-23 Identities = 106/122 (86%) Strand = Plus / Minus Query: 145 agatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 204 |||| ||||||||||||||||||||||||||||| | ||||| |||||||| || || Sbjct: 2599 agatcgagatgctgttggggatgcccttggcggtgatgccggcggcggcgccggtgacgt 2540 Query: 205 cggaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttga 264 |||||||||||||||| ||||||||||| || |||| || ||||| ||||||||||||| Sbjct: 2539 cggaggtgttggggtaaagcagcatgtatgggaactcggctgggccattgcggttcttga 2480 Query: 265 gc 266 || Sbjct: 2479 gc 2478
>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16 map S2606, complete sequence Length = 124140 Score = 115 bits (58), Expect = 8e-23 Identities = 106/122 (86%) Strand = Plus / Minus Query: 145 agatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 204 |||| ||||||||||||||||||||||||||||| | ||||| |||||||| || || Sbjct: 47235 agatcgagatgctgttggggatgcccttggcggtgatgccggcggcggcgccggtgacgt 47176 Query: 205 cggaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttga 264 |||||||||||||||| ||||||||||| || |||| || ||||| ||||||||||||| Sbjct: 47175 cggaggtgttggggtaaagcagcatgtatgggaactcggctgggccattgcggttcttga 47116 Query: 265 gc 266 || Sbjct: 47115 gc 47114 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 145 agatggagatgctgttggggatgcccttggcggtaagccc 184 |||||||||||||||||||||||||| ||||||| ||||| Sbjct: 65814 agatggagatgctgttggggatgcccatggcggtgagccc 65775 Score = 50.1 bits (25), Expect = 0.004 Identities = 49/57 (85%) Strand = Plus / Minus Query: 210 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| Sbjct: 65746 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 65690
>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete sequence Length = 119329 Score = 115 bits (58), Expect = 8e-23 Identities = 106/122 (86%) Strand = Plus / Plus Query: 145 agatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 204 |||| ||||||||||||||||||||||||||||| | ||||| |||||||| || || Sbjct: 10788 agatcgagatgctgttggggatgcccttggcggtgatgccggcggcggcgccggtgacgt 10847 Query: 205 cggaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttga 264 |||||||||||||||| ||||||||||| || |||| || ||||| ||||||||||||| Sbjct: 10848 cggaggtgttggggtaaagcagcatgtatgggaactcggctgggccattgcggttcttga 10907 Query: 265 gc 266 || Sbjct: 10908 gc 10909
>gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, complete cds Length = 2910 Score = 99.6 bits (50), Expect = 5e-18 Identities = 110/130 (84%) Strand = Plus / Minus Query: 145 agatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 204 ||||||| |||||||| ||||||||| ||||||| ||||| | || ||| |||||| Sbjct: 2656 agatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgtgtggt 2597 Query: 205 cggaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttga 264 |||||||||| ||||||||||||||||| || ||||| ||||| ||| |||||||||| | Sbjct: 2596 cggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggttcttta 2537 Query: 265 gctccgggtc 274 ||| |||||| Sbjct: 2536 gctgcgggtc 2527
>ref|XM_469412.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2686 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 145 agatggagatgctgttggggatgcccttggcggtaagccc 184 |||||||||||||||||||||||||| ||||||| ||||| Sbjct: 2444 agatggagatgctgttggggatgcccatggcggtgagccc 2405 Score = 50.1 bits (25), Expect = 0.004 Identities = 49/57 (85%) Strand = Plus / Minus Query: 210 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| Sbjct: 2376 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 2320
>ref|XM_469411.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3165 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 145 agatggagatgctgttggggatgcccttggcggtaagccc 184 |||||||||||||||||||||||||| ||||||| ||||| Sbjct: 2923 agatggagatgctgttggggatgcccatggcggtgagccc 2884 Score = 50.1 bits (25), Expect = 0.004 Identities = 49/57 (85%) Strand = Plus / Minus Query: 210 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| Sbjct: 2855 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 2799
>gb|DQ389164.1| Oryza sativa (japonica cultivar-group) dual positional specificity lipoxygenase mRNA, complete cds Length = 3154 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 145 agatggagatgctgttggggatgcccttggcggtaagccc 184 |||||||||||||||||||||||||| ||||||| ||||| Sbjct: 2917 agatggagatgctgttggggatgcccatggcggtgagccc 2878 Score = 50.1 bits (25), Expect = 0.004 Identities = 49/57 (85%) Strand = Plus / Minus Query: 210 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| Sbjct: 2849 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 2793
>dbj|AK105792.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-H08, full insert sequence Length = 1560 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 145 agatggagatgctgttggggatgcccttggcggtaagccc 184 |||||||||||||||||||||||||| ||||||| ||||| Sbjct: 1330 agatggagatgctgttggggatgcccatggcggtgagccc 1291 Score = 50.1 bits (25), Expect = 0.004 Identities = 49/57 (85%) Strand = Plus / Minus Query: 210 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| Sbjct: 1262 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 1206
>dbj|AK072869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143O17, full insert sequence Length = 2851 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 145 agatggagatgctgttggggatgcccttggcggtaagccc 184 |||||||||||||||||||||||||| ||||||| ||||| Sbjct: 2595 agatggagatgctgttggggatgcccatggcggtgagccc 2556 Score = 50.1 bits (25), Expect = 0.004 Identities = 49/57 (85%) Strand = Plus / Minus Query: 210 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| Sbjct: 2527 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 2471
>dbj|AK072689.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143H13, full insert sequence Length = 3167 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 145 agatggagatgctgttggggatgcccttggcggtaagccc 184 |||||||||||||||||||||||||| ||||||| ||||| Sbjct: 2925 agatggagatgctgttggggatgcccatggcggtgagccc 2886 Score = 50.1 bits (25), Expect = 0.004 Identities = 49/57 (85%) Strand = Plus / Minus Query: 210 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| Sbjct: 2857 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 2801
>dbj|AK071121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079P11, full insert sequence Length = 1726 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 145 agatggagatgctgttggggatgcccttggcggtaagccc 184 |||||||||||||||||||||||||| ||||||| ||||| Sbjct: 1495 agatggagatgctgttggggatgcccatggcggtgagccc 1456 Score = 50.1 bits (25), Expect = 0.004 Identities = 49/57 (85%) Strand = Plus / Minus Query: 210 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| Sbjct: 1427 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 1371
>gb|U32428.1|TAU32428 Triticum aestivum lipoxygenase mRNA, partial cds Length = 1814 Score = 61.9 bits (31), Expect = 1e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 145 agatggagatgctgttggggatgcccttggc 175 ||||||||||||||||||||||||||||||| Sbjct: 1554 agatggagatgctgttggggatgcccttggc 1524 Score = 48.1 bits (24), Expect = 0.015 Identities = 48/56 (85%) Strand = Plus / Minus Query: 210 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgag 265 |||||||||||||| ||||||||||| || || || || || || ||||||||||| Sbjct: 1486 gtgttggggtagagtagcatgtaggggaattttgctggcccattccggttcttgag 1431
>gb|L37359.1|BLYLOXB Hordeum vulgare lipoxygenase (LoxB) mRNA, complete cds Length = 3003 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 210 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagctcc 269 ||||||||||| |||||||||||||| | ||| | || ||||| |||||||||||| || Sbjct: 2694 gtgttggggtacagcagcatgtagggcatcttcacgggcccgttccggttcttgagcgcc 2635 Query: 270 gggtc 274 ||||| Sbjct: 2634 gggtc 2630 Score = 56.0 bits (28), Expect = 6e-05 Identities = 37/40 (92%) Strand = Plus / Minus Query: 145 agatggagatgctgttggggatgcccttggcggtaagccc 184 ||||||||| |||||||||||||||| ||||||| ||||| Sbjct: 2762 agatggagacgctgttggggatgcccatggcggtgagccc 2723
>gb|AY103567.1| Zea mays PCO116252 mRNA sequence Length = 3135 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgcccttggcggtaagccc 184 ||||||||||||||||| |||||| |||| |||||||| Sbjct: 2896 atggagatgctgttgggaatgcccatggcagtaagccc 2859
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 48.1 bits (24), Expect = 0.015 Identities = 24/24 (100%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgccc 170 |||||||||||||||||||||||| Sbjct: 22970456 atggagatgctgttggggatgccc 22970433
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 48.1 bits (24), Expect = 0.015 Identities = 24/24 (100%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgccc 170 |||||||||||||||||||||||| Sbjct: 22898647 atggagatgctgttggggatgccc 22898624
>emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa0028L05 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155568 Score = 48.1 bits (24), Expect = 0.015 Identities = 24/24 (100%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgccc 170 |||||||||||||||||||||||| Sbjct: 79733 atggagatgctgttggggatgccc 79710
>gb|U56406.1|HVU56406 Hordeum vulgare methyljasmonate-inducible lipoxygenase 2 mRNA, complete cds Length = 3054 Score = 48.1 bits (24), Expect = 0.015 Identities = 24/24 (100%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgccc 170 |||||||||||||||||||||||| Sbjct: 2912 atggagatgctgttggggatgccc 2889
>emb|AJ507213.1|HVU507213 Hordeum vulgare mRNA for lipoxygenase 2 (lox2:Hv:3 gene) Length = 2967 Score = 46.1 bits (23), Expect = 0.059 Identities = 23/23 (100%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgcc 169 ||||||||||||||||||||||| Sbjct: 2770 atggagatgctgttggggatgcc 2748
>ref|XM_464447.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3123 Score = 44.1 bits (22), Expect = 0.23 Identities = 25/26 (96%) Strand = Plus / Minus Query: 145 agatggagatgctgttggggatgccc 170 |||||||||||||||| ||||||||| Sbjct: 2879 agatggagatgctgtttgggatgccc 2854
>gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 genomic sequence, complete sequence Length = 158714 Score = 44.1 bits (22), Expect = 0.23 Identities = 25/26 (96%) Strand = Plus / Plus Query: 147 atggagatgctgttggggatgccctt 172 |||| ||||||||||||||||||||| Sbjct: 49251 atggtgatgctgttggggatgccctt 49276
>gb|AC144427.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAb0012F18, complete sequence Length = 122159 Score = 44.1 bits (22), Expect = 0.23 Identities = 25/26 (96%) Strand = Plus / Plus Query: 147 atggagatgctgttggggatgccctt 172 |||| ||||||||||||||||||||| Sbjct: 111410 atggtgatgctgttggggatgccctt 111435
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.23 Identities = 25/26 (96%) Strand = Plus / Plus Query: 145 agatggagatgctgttggggatgccc 170 |||||||||||||||| ||||||||| Sbjct: 5276965 agatggagatgctgtttgggatgccc 5276990
>dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1225_F07 Length = 142772 Score = 44.1 bits (22), Expect = 0.23 Identities = 25/26 (96%) Strand = Plus / Plus Query: 145 agatggagatgctgttggggatgccc 170 |||||||||||||||| ||||||||| Sbjct: 3268 agatggagatgctgtttgggatgccc 3293
>dbj|AK071915.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074B03, full insert sequence Length = 3160 Score = 44.1 bits (22), Expect = 0.23 Identities = 25/26 (96%) Strand = Plus / Minus Query: 145 agatggagatgctgttggggatgccc 170 |||||||||||||||| ||||||||| Sbjct: 2878 agatggagatgctgtttgggatgccc 2853
>dbj|AK061610.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-B01, full insert sequence Length = 2250 Score = 44.1 bits (22), Expect = 0.23 Identities = 25/26 (96%) Strand = Plus / Minus Query: 145 agatggagatgctgttggggatgccc 170 |||||||||||||||| ||||||||| Sbjct: 2040 agatggagatgctgtttgggatgccc 2015
>gb|AY111869.1| Zea mays CL452_-8 mRNA sequence Length = 568 Score = 44.1 bits (22), Expect = 0.23 Identities = 34/38 (89%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgcccttggcggtaagccc 184 ||||||||||||||||| |||||| |||| || ||||| Sbjct: 363 atggagatgctgttgggaatgcccatggcagtgagccc 326
>gb|AY110522.1| Zea mays CL4677_2 mRNA sequence Length = 1304 Score = 44.1 bits (22), Expect = 0.23 Identities = 25/26 (96%) Strand = Plus / Plus Query: 145 agatggagatgctgttggggatgccc 170 |||||||||||||| ||||||||||| Sbjct: 136 agatggagatgctgctggggatgccc 161
>gb|AY104322.1| Zea mays PCO093659 mRNA sequence Length = 1439 Score = 44.1 bits (22), Expect = 0.23 Identities = 25/26 (96%) Strand = Plus / Minus Query: 145 agatggagatgctgttggggatgccc 170 |||||||||||||| ||||||||||| Sbjct: 1212 agatggagatgctgctggggatgccc 1187
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 0.92 Identities = 30/33 (90%) Strand = Plus / Plus Query: 203 gtcggaggtgttggggtagagcagcatgtaggg 235 |||||||||||||||| | |||||| ||||||| Sbjct: 1892951 gtcggaggtgttgggggacagcagcgtgtaggg 1892983
>dbj|AP003526.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0548D03 Length = 156709 Score = 42.1 bits (21), Expect = 0.92 Identities = 30/33 (90%) Strand = Plus / Plus Query: 203 gtcggaggtgttggggtagagcagcatgtaggg 235 |||||||||||||||| | |||||| ||||||| Sbjct: 21731 gtcggaggtgttgggggacagcagcgtgtaggg 21763
>dbj|AP004234.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0001H02 Length = 147160 Score = 42.1 bits (21), Expect = 0.92 Identities = 30/33 (90%) Strand = Plus / Plus Query: 203 gtcggaggtgttggggtagagcagcatgtaggg 235 |||||||||||||||| | |||||| ||||||| Sbjct: 93429 gtcggaggtgttgggggacagcagcgtgtaggg 93461
>ref|XM_797032.1| PREDICTED: Strongylocentrotus purpuratus similar to mothers against decapentaplegic homolog 8 protein, sma8 protein, transcript variant 19 (LOC582943), mRNA Length = 4080 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 aaattagatggagatgctgt 159 |||||||||||||||||||| Sbjct: 3101 aaattagatggagatgctgt 3120
>ref|XM_797030.1| PREDICTED: Strongylocentrotus purpuratus similar to mothers against decapentaplegic homolog 8 protein, sma8 protein, transcript variant 18 (LOC582943), mRNA Length = 4176 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 aaattagatggagatgctgt 159 |||||||||||||||||||| Sbjct: 3197 aaattagatggagatgctgt 3216
>ref|XM_797025.1| PREDICTED: Strongylocentrotus purpuratus similar to mothers against decapentaplegic homolog 8 protein, sma8 protein, transcript variant 17 (LOC582943), mRNA Length = 4125 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 aaattagatggagatgctgt 159 |||||||||||||||||||| Sbjct: 3146 aaattagatggagatgctgt 3165
>ref|XM_797021.1| PREDICTED: Strongylocentrotus purpuratus similar to mothers against decapentaplegic homolog 8 protein, sma8 protein, transcript variant 16 (LOC582943), mRNA Length = 4188 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 aaattagatggagatgctgt 159 |||||||||||||||||||| Sbjct: 3209 aaattagatggagatgctgt 3228
>ref|XM_796653.1| PREDICTED: Strongylocentrotus purpuratus similar to mothers against decapentaplegic homolog 8 protein, sma8 protein, transcript variant 2 (LOC582943), mRNA Length = 4200 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 aaattagatggagatgctgt 159 |||||||||||||||||||| Sbjct: 3221 aaattagatggagatgctgt 3240
>gb|AC109929.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0093J03, complete sequence Length = 200626 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 155 gctgttggggatgcccttggcggt 178 ||||||||||||||||||| |||| Sbjct: 137475 gctgttggggatgcccttgccggt 137452
>emb|AL078613.10|HSA354I12 Human DNA sequence from clone RP11-354I12 on chromosome 22 Contains an STS and GSSs, complete sequence Length = 60837 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 cacagacacacactacacca 77 |||||||||||||||||||| Sbjct: 58806 cacagacacacactacacca 58825
>emb|AL645973.8| Mouse DNA sequence from clone RP23-287B6 on chromosome 11 Contains a pseudogene similar to part of ribosomal protein S2 (Rps2), a mitchondrial ribosomal protein S7 (Rpms7, MRP-S7) (Mrps7) pseudogene, a pseudogene similar to part of a novel protein, a novel gene and a eukaryotic translation initiation factor pseudogene, complete sequence Length = 196006 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ttcttgagctccgggtcatg 277 |||||||||||||||||||| Sbjct: 51161 ttcttgagctccgggtcatg 51142
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 gccgggccgttgcggttctt 262 |||||||||||||||||||| Sbjct: 440838 gccgggccgttgcggttctt 440857
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 155 gctgttggggatgcccttggcggt 178 ||||||||||||||||||| |||| Sbjct: 20830414 gctgttggggatgcccttgccggt 20830391
>dbj|AK073570.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046P13, full insert sequence Length = 3010 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 155 gctgttggggatgcccttggcggt 178 ||||||||||||||||||| |||| Sbjct: 2681 gctgttggggatgcccttgccggt 2658
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 155 gctgttggggatgcccttggcggt 178 ||||||||||||||||||| |||| Sbjct: 21140649 gctgttggggatgcccttgccggt 21140626
>emb|AL954813.14| Mouse DNA sequence from clone RP24-541E15 on chromosome 4, complete sequence Length = 140383 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 cacagacacacactacacca 77 |||||||||||||||||||| Sbjct: 40251 cacagacacacactacacca 40232 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,344,019 Number of Sequences: 3902068 Number of extensions: 2344019 Number of successful extensions: 46453 Number of sequences better than 10.0: 75 Number of HSP's better than 10.0 without gapping: 79 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 46163 Number of HSP's gapped (non-prelim): 274 length of query: 280 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 258 effective length of database: 17,147,199,772 effective search space: 4423977541176 effective search space used: 4423977541176 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)