ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl27h04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1OR2_ANOGA (Q8WTE6) Odorant receptor Or2 (AgOr2) 30 3.2
2TRCB_XENLA (Q91854) Beta-TrCP (Beta-transducin repeat-containing... 28 9.2

>OR2_ANOGA (Q8WTE6) Odorant receptor Or2 (AgOr2)|
          Length = 378

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -1

Query: 189 YVHEMTDVSIIHHMCLLLFFSFYFRRCVLV 100
           YVH++   S++ H+CLL F SF    C L+
Sbjct: 243 YVHDLN--SLVTHLCLLEFLSFGMMLCALL 270



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>TRCB_XENLA (Q91854) Beta-TrCP (Beta-transducin repeat-containing protein)|
          Length = 518

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
 Frame = -2

Query: 302 QCGQVSVTESMISKWMDYKVPKVNYHMCKSWPLPYIMCTYMK*QMCQSFITCACCYSFHF 123
           +C QV   E +IS+   Y+   +N              TY+K  + + FIT         
Sbjct: 75  ECDQVEFVEHLISRMCHYQHGHIN--------------TYLKPMLQRDFITALPARGLDH 120

Query: 122 ISEDVCLFLGIK-LC 81
           I+E++  +L  K LC
Sbjct: 121 IAENILSYLDAKSLC 135


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,442,560
Number of Sequences: 219361
Number of extensions: 1156625
Number of successful extensions: 2341
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2341
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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