>FADB_SHEON (Q8EKR9) Fatty oxidation complex alpha subunit [Includes: Enoyl-CoA|
           hydratase (EC 4.2.1.17);
           Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC
           5.3.3.8); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35);
           3-hydroxybutyryl-CoA epimerase (EC 5.1.2.
          Length = 716

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
 Frame = +1

Query: 148 KPQLFC-MHLPNVVKEKPLLEEAKTSRNTAETL-HVLLISSQRMKTAI 285
           KP+ FC MH  N V + PL+E  +   ++ ET+  V+  +S+  KT I
Sbjct: 442 KPERFCGMHFFNPVHKMPLVEVIRGEHSSEETIASVVAYASKMGKTPI 489

>METK_MYCGE (P47293) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine|
           adenosyltransferase) (AdoMet synthetase) (MAT)
          Length = 383

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 10/46 (21%)
 Frame = -3

Query: 108 WSIT-----L*FLSTVAHSDSEIFGHYGNNIY-----VAIVKLNCL 1
           WSIT     L  L  V +SD  ++GH+GN++        + KL CL
Sbjct: 333 WSITKIIDKLKLLDFVKYSDYAVYGHFGNDLSPWEQPTELDKLECL 378

>MIPO1_HUMAN (Q8TD10) Mirror-image polydactyly gene 1 protein|
          Length = 442

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = +2

Query: 62  ESLWATVDKNYNVMDHRH*KNTLETMGPQNLSCSACICQTSSKKNR 199
           ES++ T +K YNVM+HRH     E M P         CQ +S  ++
Sbjct: 74  ESVYCTTEK-YNVMEHRHNDMHYECMTP---------CQVTSDSDK 109

>CCPR_YARLI (Q6C0Z6) Cytochrome c peroxidase, mitochondrial precursor (EC|
           1.11.1.5) (CCP)
          Length = 340

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
 Frame = -1

Query: 176 GRCMQNN*GFGDPW--SPVYFFND 111
           GRC + N GF  PW  SP  F ND
Sbjct: 227 GRCHKQNSGFEGPWTFSPTMFTND 250

>FADB_VIBF1 (Q5E8X6) Fatty oxidation complex alpha subunit [Includes: Enoyl-CoA|
           hydratase (EC 4.2.1.17);
           Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC
           5.3.3.8); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35);
           3-hydroxybutyryl-CoA epimerase (EC 5.1.2.
          Length = 725

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = +1

Query: 148 KPQLFC-MHLPNVVKEKPLLEEAKTSRNTAETL-HVLLISSQRMKTAI 285
           +P+ FC MH  N V   PL+E  +  + + +T+  V+  +SQ  KT I
Sbjct: 442 RPENFCGMHFFNPVHRMPLVEVIRGEKTSQQTIDRVVAYASQMGKTPI 489

>GBB_SCHPO (Q10282) Guanine nucleotide-binding protein beta subunit|
          Length = 305

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 13/49 (26%), Positives = 21/49 (42%)
 Frame = -2

Query: 172 DACRTTEVLGTHGLQCIFLMTMVHNVVIFIYGGP*RFRNFWSLRKQYLC 26
           +  +   VL  H +  + L  +  N  +F+ GG  +    W LR  Y C
Sbjct: 135 EQAKAISVLKGHEMDIVSLDFLPSNPNLFVTGGCDKLAKLWDLRAAYCC 183

>SYFB_WOLTR (Q5GSH5) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase beta chain) (PheRS)
          Length = 792

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +1

Query: 184 VKEKPLLEEAKTSRNTAETLHVLLIS 261
           +KE+PL++  +   NT + L VL+IS
Sbjct: 480 IKEEPLIDNVEVEINTHDNLRVLMIS 505

>YA00_TREPA (O83965) Hypothetical protein TP1000|
          Length = 223

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -1

Query: 347 EILCP*SVALLCFWPARAINGMAVFIRCEDMSRTWRVSAVFLD 219
           E + P +  + CF PARA +G     R   ++RTW +   ++D
Sbjct: 114 ESVAPGAFVVRCFVPARAFHG-----RIHAITRTWDMDGEWID 151

>GAA1_YEAST (P39012) GPI transamidase component GAA1|
          Length = 614

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -1

Query: 245 WRVSAVFLDVFASSNSGFSLTTFGR 171
           WR+ +V L   A  NSG  +TTFGR
Sbjct: 298 WRIQSVTLK--AHGNSGHDITTFGR 320

>VGFR3_MOUSE (P35917) Vascular endothelial growth factor receptor 3 precursor|
           (EC 2.7.10.1) (VEGFR-3) (Tyrosine-protein kinase
           receptor FLT4)
          Length = 1363

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 126 HWRPWVPKTSVVLHASAKRRQR 191
           HWRPW P  +    +  +R+QR
Sbjct: 459 HWRPWTPCKTFAQRSLRRRQQR 480


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,503,094
Number of Sequences: 219361
Number of extensions: 1178309
Number of successful extensions: 2702
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2702
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 1380984984
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)