ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl27g08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 153 4e-34
2dbj|AK119540.1| Oryza sativa (japonica cultivar-group) cDNA clon... 153 4e-34
3dbj|AK062059.1| Oryza sativa (japonica cultivar-group) cDNA clon... 153 4e-34
4gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 153 4e-34
5emb|AL731747.2|CNS08C7W Oryza sativa chromosome 12, . BAC OSJNBa... 153 4e-34
6gb|AY109575.1| Zea mays CL1708_1 mRNA sequence 151 2e-33
7dbj|AK067367.1| Oryza sativa (japonica cultivar-group) cDNA clon... 145 1e-31
8dbj|BS000097.1| Pan troglodytes chromosome 22 clone:RP43-016D07,... 46 0.072
9gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complet... 44 0.28
10gb|AF512506.1| Morone saxatilis class IIIB myosin short isoform ... 42 1.1
11gb|AC174772.1| Gasterosteus aculeatus clone VMRC28-84K14, comple... 42 1.1
12gb|AC146967.3| Bos taurus clone RP42-279M12, complete sequence 40 4.4
13gb|AC104514.2| Drosophila melanogaster clone BACR22L21, complete... 40 4.4
14gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 40 4.4
15gb|DP000008.1| Bos taurus target 1 genomic scaffold 40 4.4
16gb|AC115361.5| Mus musculus BAC clone RP24-76P12 from chromosome... 40 4.4
17emb|X83598.1|TTRTP T.thermophilus rpsB, tsf and pyrH genes 40 4.4
18emb|AL732464.19| Mouse DNA sequence from clone RP23-453F10 on ch... 40 4.4
19gb|AC113370.2| Homo sapiens chromosome 5 clone RP11-124O5, compl... 40 4.4
20gb|AC093294.3| Homo sapiens chromosome 5 clone RP11-524C16, comp... 40 4.4
21gb|AC091500.1|AC091500 Drosophila melanogaster, chromosome 2R, r... 40 4.4
22dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
23dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
24dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 40 4.4
25emb|BX005447.8| Zebrafish DNA sequence from clone DKEY-29B14, co... 40 4.4
26emb|BX088551.7| Zebrafish DNA sequence from clone CH211-106A19 i... 40 4.4
27gb|AC153868.3| Mus musculus BAC RP23-384D16 (Roswell Park Cancer... 40 4.4
28gb|AC153578.4| Mus musculus 6 BAC RP23-218P2 (Roswell Park Cance... 40 4.4
29gb|U50042.1|DDU50042 Dictyostelium discoideum repE homolog of UV... 40 4.4
30gb|AE003801.4| Drosophila melanogaster chromosome 2R, section 49... 40 4.4
31gb|AE017221.1| Thermus thermophilus HB27, complete genome 40 4.4
32gb|AC004640.1|AC004640 Drosophila melanogaster DNA sequence (P1s... 40 4.4
33gb|AC122284.5| Mus musculus BAC clone RP23-246A5 from 6, complet... 40 4.4
34gb|AC142414.3| Mus musculus BAC clone RP23-372N15 from 8, comple... 40 4.4
35emb|AL806516.4| Mouse DNA sequence from clone RP23-453N20 on chr... 40 4.4
36dbj|AB238686.1| Thiobacillus thioparus scnC, orf1, orf2, orf3, o... 40 4.4 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  153 bits (77), Expect = 4e-34
 Identities = 98/105 (93%)
 Strand = Plus / Minus

                                                                            
Query: 230      aacctccgtaccttgatgttctcccccagaccagcgatcgtctccttcacgagatccttc 289
                |||||||||||||||||||||||||| ||    ||||||||||||||||| |||||||||
Sbjct: 21699747 aacctccgtaccttgatgttctccccaagggtggcgatcgtctccttcacaagatccttc 21699688

                                                             
Query: 290      accgtcttgctgtcatccttgatgaagggctgctccaggagggcc 334
                |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 21699687 accgtcttgctgtcatccttgatgaaaggctgctccaggagggcc 21699643



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                                  
Query: 139      atgaatcaaaatgtgcccaactcctgatgtcagg 172
                |||||||||||| |||||||||||||||||||||
Sbjct: 21699835 atgaatcaaaatatgcccaactcctgatgtcagg 21699802



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 1        gatctctcttgtcatctaca 20
                ||||||||||||||||||||
Sbjct: 21699988 gatctctcttgtcatctaca 21699969



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 300      tgtcatccttgatgaagggctgctccag 327
                |||||| |||||||||||| ||||||||
Sbjct: 21698816 tgtcattcttgatgaagggttgctccag 21698789
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>dbj|AK119540.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-C06, full
            insert sequence
          Length = 1368

 Score =  153 bits (77), Expect = 4e-34
 Identities = 98/105 (93%)
 Strand = Plus / Minus

                                                                        
Query: 230  aacctccgtaccttgatgttctcccccagaccagcgatcgtctccttcacgagatccttc 289
            |||||||||||||||||||||||||| ||    ||||||||||||||||| |||||||||
Sbjct: 1101 aacctccgtaccttgatgttctccccaagggtggcgatcgtctccttcacaagatccttc 1042

                                                         
Query: 290  accgtcttgctgtcatccttgatgaagggctgctccaggagggcc 334
            |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1041 accgtcttgctgtcatccttgatgaaaggctgctccaggagggcc 997



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                              
Query: 139  atgaatcaaaatgtgcccaactcctgatgtcagg 172
            |||||||||||| |||||||||||||||||||||
Sbjct: 1189 atgaatcaaaatatgcccaactcctgatgtcagg 1156



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1    gatctctcttgtcatctaca 20
            ||||||||||||||||||||
Sbjct: 1342 gatctctcttgtcatctaca 1323



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 300 tgtcatccttgatgaagggctgctccag 327
           |||||| |||||||||||| ||||||||
Sbjct: 308 tgtcattcttgatgaagggttgctccag 281
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>dbj|AK062059.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-C08, full
           insert sequence
          Length = 404

 Score =  153 bits (77), Expect = 4e-34
 Identities = 98/105 (93%)
 Strand = Plus / Minus

                                                                       
Query: 230 aacctccgtaccttgatgttctcccccagaccagcgatcgtctccttcacgagatccttc 289
           |||||||||||||||||||||||||| ||    ||||||||||||||||| |||||||||
Sbjct: 137 aacctccgtaccttgatgttctccccaagggtggcgatcgtctccttcacaagatccttc 78

                                                        
Query: 290 accgtcttgctgtcatccttgatgaagggctgctccaggagggcc 334
           |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 77  accgtcttgctgtcatccttgatgaaaggctgctccaggagggcc 33



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                             
Query: 139 atgaatcaaaatgtgcccaactcctgatgtcagg 172
           |||||||||||| |||||||||||||||||||||
Sbjct: 225 atgaatcaaaatatgcccaactcctgatgtcagg 192



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 1   gatctctcttgtcatctaca 20
           ||||||||||||||||||||
Sbjct: 378 gatctctcttgtcatctaca 359
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  153 bits (77), Expect = 4e-34
 Identities = 98/105 (93%)
 Strand = Plus / Minus

                                                                            
Query: 230      aacctccgtaccttgatgttctcccccagaccagcgatcgtctccttcacgagatccttc 289
                |||||||||||||||||||||||||| ||    ||||||||||||||||| |||||||||
Sbjct: 21628092 aacctccgtaccttgatgttctccccaagggtggcgatcgtctccttcacaagatccttc 21628033

                                                             
Query: 290      accgtcttgctgtcatccttgatgaagggctgctccaggagggcc 334
                |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 21628032 accgtcttgctgtcatccttgatgaaaggctgctccaggagggcc 21627988



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                                  
Query: 139      atgaatcaaaatgtgcccaactcctgatgtcagg 172
                |||||||||||| |||||||||||||||||||||
Sbjct: 21628180 atgaatcaaaatatgcccaactcctgatgtcagg 21628147



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 1        gatctctcttgtcatctaca 20
                ||||||||||||||||||||
Sbjct: 21628333 gatctctcttgtcatctaca 21628314



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 300      tgtcatccttgatgaagggctgctccag 327
                |||||| |||||||||||| ||||||||
Sbjct: 21627161 tgtcattcttgatgaagggttgctccag 21627134
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>emb|AL731747.2|CNS08C7W Oryza sativa chromosome 12, . BAC OSJNBa0024C08 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 186030

 Score =  153 bits (77), Expect = 4e-34
 Identities = 98/105 (93%)
 Strand = Plus / Plus

                                                                          
Query: 230    aacctccgtaccttgatgttctcccccagaccagcgatcgtctccttcacgagatccttc 289
              |||||||||||||||||||||||||| ||    ||||||||||||||||| |||||||||
Sbjct: 112804 aacctccgtaccttgatgttctccccaagggtggcgatcgtctccttcacaagatccttc 112863

                                                           
Query: 290    accgtcttgctgtcatccttgatgaagggctgctccaggagggcc 334
              |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 112864 accgtcttgctgtcatccttgatgaaaggctgctccaggagggcc 112908



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                                
Query: 139    atgaatcaaaatgtgcccaactcctgatgtcagg 172
              |||||||||||| |||||||||||||||||||||
Sbjct: 112716 atgaatcaaaatatgcccaactcctgatgtcagg 112749



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 300    tgtcatccttgatgaagggctgctccag 327
              |||||| |||||||||||| ||||||||
Sbjct: 113735 tgtcattcttgatgaagggttgctccag 113762



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 1      gatctctcttgtcatctaca 20
              ||||||||||||||||||||
Sbjct: 112563 gatctctcttgtcatctaca 112582
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>gb|AY109575.1| Zea mays CL1708_1 mRNA sequence
          Length = 2612

 Score =  151 bits (76), Expect = 2e-33
 Identities = 118/132 (89%)
 Strand = Plus / Minus

                                                                        
Query: 201  atcagttttcgccgagggtatacctgacaaacctccgtaccttgatgttctcccccagac 260
            ||||||| ||||| ||||| |||| |||||||||||| ||||| ||||||||||| ||  
Sbjct: 2362 atcagttctcgcccagggtgtaccggacaaacctccgcaccttaatgttctccccgagtg 2303

                                                                        
Query: 261  cagcgatcgtctccttcacgagatccttcaccgtcttgctgtcatccttgatgaagggct 320
              |||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 2302 aggcgaccgtctccttcacgagatccttcaccgtcttgctgtcgtccttgatgtagggct 2243

                        
Query: 321  gctccaggaggg 332
            ||||||||||||
Sbjct: 2242 gctccaggaggg 2231



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 65   agtaacaggtgatacaaaattatacatggaaccgagt 101
            |||||||||||||||  ||||| | ||||||||||||
Sbjct: 2519 agtaacaggtgatacggaattacagatggaaccgagt 2483
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>dbj|AK067367.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106B18, full
            insert sequence
          Length = 3861

 Score =  145 bits (73), Expect = 1e-31
 Identities = 97/105 (92%)
 Strand = Plus / Minus

                                                                        
Query: 230  aacctccgtaccttgatgttctcccccagaccagcgatcgtctccttcacgagatccttc 289
            |||||||||||||||||||||||||| ||    ||||||||||||| ||| |||||||||
Sbjct: 3594 aacctccgtaccttgatgttctccccaagggtggcgatcgtctcctccacaagatccttc 3535

                                                         
Query: 290  accgtcttgctgtcatccttgatgaagggctgctccaggagggcc 334
            |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 3534 accgtcttgctgtcatccttgatgaaaggctgctccaggagggcc 3490



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                              
Query: 139  atgaatcaaaatgtgcccaactcctgatgtcagg 172
            |||||||||||| |||||||||||||||||||||
Sbjct: 3682 atgaatcaaaatatgcccaactcctgatgtcagg 3649



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1    gatctctcttgtcatctaca 20
            ||||||||||||||||||||
Sbjct: 3835 gatctctcttgtcatctaca 3816



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 300  tgtcatccttgatgaagggctgctccag 327
            |||||| |||||||||||| ||||||||
Sbjct: 2801 tgtcattcttgatgaagggttgctccag 2774
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>dbj|BS000097.1| Pan troglodytes chromosome 22 clone:RP43-016D07, map 22, complete
              sequences
          Length = 184809

 Score = 46.1 bits (23), Expect = 0.072
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 137    tgatgaatcaaaatgtgcccaac 159
              |||||||||||||||||||||||
Sbjct: 133851 tgatgaatcaaaatgtgcccaac 133873
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>gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complete genome
          Length = 2401520

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 113     caaactagcaacagctatgcat 134
               ||||||||||||||||||||||
Sbjct: 2205587 caaactagcaacagctatgcat 2205608
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>gb|AF512506.1| Morone saxatilis class IIIB myosin short isoform mRNA, complete cds
          Length = 4020

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 307 cttgatgaagggctgctccaggagg 331
           |||||||||||| ||||||||||||
Sbjct: 903 cttgatgaagggatgctccaggagg 879
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>gb|AC174772.1| Gasterosteus aculeatus clone VMRC28-84K14, complete sequence
          Length = 121286

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 307   cttgatgaagggctgctccaggagg 331
             |||||||||||| ||||||||||||
Sbjct: 45451 cttgatgaagggatgctccaggagg 45475
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>gb|AC146967.3| Bos taurus clone RP42-279M12, complete sequence
          Length = 186611

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 302    tcatccttgatgaagggctg 321
              ||||||||||||||||||||
Sbjct: 136263 tcatccttgatgaagggctg 136244
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>gb|AC104514.2| Drosophila melanogaster clone BACR22L21, complete sequence
          Length = 170718

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 99    agtacaactgagtacaaact 118
             ||||||||||||||||||||
Sbjct: 13521 agtacaactgagtacaaact 13502
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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 305    tccttgatgaagggctgctc 324
              ||||||||||||||||||||
Sbjct: 692770 tccttgatgaagggctgctc 692751
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>gb|DP000008.1| Bos taurus target 1 genomic scaffold
          Length = 2072671

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 302     tcatccttgatgaagggctg 321
               ||||||||||||||||||||
Sbjct: 2022323 tcatccttgatgaagggctg 2022304
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>gb|AC115361.5| Mus musculus BAC clone RP24-76P12 from chromosome 8, complete sequence
          Length = 235095

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 73    gtgatacaaaattatacatg 92
             ||||||||||||||||||||
Sbjct: 59225 gtgatacaaaattatacatg 59206
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>emb|X83598.1|TTRTP T.thermophilus rpsB, tsf and pyrH genes
          Length = 1124

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 300 tgtcatccttgatgaagggctgctccag 327
           |||| ||||||| |||||||||||||||
Sbjct: 763 tgtcgtccttgacgaagggctgctccag 736
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>emb|AL732464.19| Mouse DNA sequence from clone RP23-453F10 on chromosome 4, complete
              sequence
          Length = 192919

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 136    atgatgaatcaaaatgtgcc 155
              ||||||||||||||||||||
Sbjct: 105574 atgatgaatcaaaatgtgcc 105593
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>gb|AC113370.2| Homo sapiens chromosome 5 clone RP11-124O5, complete sequence
          Length = 189590

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    atacaaaattatacatggaa 95
             ||||||||||||||||||||
Sbjct: 20012 atacaaaattatacatggaa 20031
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>gb|AC093294.3| Homo sapiens chromosome 5 clone RP11-524C16, complete sequence
          Length = 171739

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 76     atacaaaattatacatggaa 95
              ||||||||||||||||||||
Sbjct: 138397 atacaaaattatacatggaa 138416
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>gb|AC091500.1|AC091500 Drosophila melanogaster, chromosome 2R, region 54F-55A, BAC clone
              BACR20E20, complete sequence
          Length = 164567

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 99     agtacaactgagtacaaact 118
              ||||||||||||||||||||
Sbjct: 163386 agtacaactgagtacaaact 163367
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 45      ggtttggaaccaggaacgat 64
               ||||||||||||||||||||
Sbjct: 6355298 ggtttggaaccaggaacgat 6355279
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>dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0515G01
          Length = 175072

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 45     ggtttggaaccaggaacgat 64
              ||||||||||||||||||||
Sbjct: 126364 ggtttggaaccaggaacgat 126345
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 300    tgtcatccttgatgaagggctgctccag 327
              |||| ||||||| |||||||||||||||
Sbjct: 821364 tgtcgtccttgacgaagggctgctccag 821391
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>emb|BX005447.8| Zebrafish DNA sequence from clone DKEY-29B14, complete sequence
          Length = 283185

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 112    acaaactagcaacagctatg 131
              ||||||||||||||||||||
Sbjct: 181005 acaaactagcaacagctatg 181024
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>emb|BX088551.7| Zebrafish DNA sequence from clone CH211-106A19 in linkage group 5,
             complete sequence
          Length = 184417

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 112   acaaactagcaacagctatg 131
             ||||||||||||||||||||
Sbjct: 69372 acaaactagcaacagctatg 69353
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>gb|AC153868.3| Mus musculus BAC RP23-384D16 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 211603

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 228    caaacctccgtaccttgatgttct 251
              ||||||||| ||||||||||||||
Sbjct: 188425 caaacctccctaccttgatgttct 188402
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>gb|AC153578.4| Mus musculus 6 BAC RP23-218P2 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 228417

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 228    caaacctccgtaccttgatgttct 251
              ||||||||| ||||||||||||||
Sbjct: 109844 caaacctccctaccttgatgttct 109821
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>gb|U50042.1|DDU50042 Dictyostelium discoideum repE homolog of UV-damaged DNA binding
           protein (repE) gene, complete cds
          Length = 4122

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 68  aacaggtgatacaaaattatacat 91
           ||||| ||||||||||||||||||
Sbjct: 373 aacagttgatacaaaattatacat 350
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>gb|AE003801.4| Drosophila melanogaster chromosome 2R, section 49 of 73 of the complete
             sequence
          Length = 254899

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 99    agtacaactgagtacaaact 118
             ||||||||||||||||||||
Sbjct: 90643 agtacaactgagtacaaact 90624
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 300    tgtcatccttgatgaagggctgctccag 327
              |||| ||||||| |||||||||||||||
Sbjct: 492444 tgtcgtccttgacgaagggctgctccag 492471
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>gb|AC004640.1|AC004640 Drosophila melanogaster DNA sequence (P1s DS07528 (D169) and DS06665
             (D220)), complete sequence
          Length = 79248

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 99    agtacaactgagtacaaact 118
             ||||||||||||||||||||
Sbjct: 67887 agtacaactgagtacaaact 67868
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>gb|AC122284.5| Mus musculus BAC clone RP23-246A5 from 6, complete sequence
          Length = 189521

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 228    caaacctccgtaccttgatgttct 251
              ||||||||| ||||||||||||||
Sbjct: 160269 caaacctccctaccttgatgttct 160292
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>gb|AC142414.3| Mus musculus BAC clone RP23-372N15 from 8, complete sequence
          Length = 192261

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 73    gtgatacaaaattatacatg 92
             ||||||||||||||||||||
Sbjct: 66679 gtgatacaaaattatacatg 66698
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>emb|AL806516.4| Mouse DNA sequence from clone RP23-453N20 on chromosome X, complete
             sequence
          Length = 179534

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   caactgagtacaaactagca 122
             ||||||||||||||||||||
Sbjct: 79655 caactgagtacaaactagca 79674
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>dbj|AB238686.1| Thiobacillus thioparus scnC, orf1, orf2, orf3, orf4, orf5 genes for
            thiocyanate hydrolase gamma subunit, thiocyanate
            hydrolase activator, putative ABC transporter subunit,
            putative ABC transporter subunit, putative ABC
            transporter subunit, putative ABC transporter subunit,
            partial and complete cds
          Length = 4910

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 279  cgagatccttcaccgtcttg 298
            ||||||||||||||||||||
Sbjct: 2491 cgagatccttcaccgtcttg 2472


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,687,516
Number of Sequences: 3902068
Number of extensions: 2687516
Number of successful extensions: 51600
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 51410
Number of HSP's gapped (non-prelim): 183
length of query: 334
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 312
effective length of database: 17,147,199,772
effective search space: 5349926328864
effective search space used: 5349926328864
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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