>FPPS2_LUPAL (P49352) Farnesyl pyrophosphate synthetase 2 (FPP synthetase 2)|
           (FPS 2) (Farnesyl diphosphate synthetase 2) [Includes:
           Dimethylallyltranstransferase (EC 2.5.1.1);
           Geranyltranstransferase (EC 2.5.1.10)]
          Length = 342

 Score = 32.0 bits (71), Expect = 0.39
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
 Frame = -2

Query: 331 EVHVSSRLG*CLEHPRDRLGVTDQIF-----RRGHCCWWNKTGIGLAELTSGGMLNS 176
           E+ ++S LG C+E  +    V D I      RRGH CW+    +G+     G +L +
Sbjct: 71  EIFLASALGWCIEWLQAYFLVLDDIMDNSHTRRGHPCWFRVPKVGMIAPNDGVVLRN 127

>FPPS2_ARATH (Q43315) Farnesyl pyrophosphate synthetase 2 (FPP synthetase 2)|
           (FPS 2) (Farnesyl diphosphate synthetase 2) [Includes:
           Dimethylallyltranstransferase (EC 2.5.1.1);
           Geranyltranstransferase (EC 2.5.1.10)]
          Length = 342

 Score = 31.6 bits (70), Expect = 0.51
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
 Frame = -2

Query: 331 EVHVSSRLG*CLEHPRDRLGVTDQIF-----RRGHCCWWNKTGIGLAELTSGGMLNS 176
           E  +S  LG C+E  +    V D I      RRG  CW+ K  +G+  +  G +L +
Sbjct: 71  ETFLSCALGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRKPKVGMIAINDGILLRN 127

>ATG26_NEUCR (Q7S1I0) Sterol 3-beta-glucosyltransferase (EC 2.4.1.173)|
           (Autophagy-related protein 26)
          Length = 1553

 Score = 31.2 bits (69), Expect = 0.66
 Identities = 24/88 (27%), Positives = 34/88 (38%)
 Frame = +3

Query: 39  HTGMAFSTPAHPRTVKNQDPVHDGLTKQCDAPNKH*RRSELASDEGEFNMPPEVSSARPI 218
           H  M F+ P    T +N++    G  K               S    FN PP  ++    
Sbjct: 153 HMAMTFAGPGIKGTARNRETA--GTVKSL-------------SQTVVFNKPPASATVDAG 197

Query: 219 PVLFHQQQWPRRKIWSVTPSLSRGCSRH 302
           P   H+++ P  K+    PSLSR  S H
Sbjct: 198 PSNIHRRRLPGHKLLQSVPSLSRLSSSH 225

>FPPS1_ARATH (Q09152) Farnesyl pyrophosphate synthetase 1, mitochondrial|
           precursor (FPP synthetase 1) (FPS 1) (Farnesyl
           diphosphate synthetase 1) [Includes:
           Dimethylallyltranstransferase (EC 2.5.1.1);
           Geranyltranstransferase (EC 2.5.1.10)]
          Length = 384

 Score = 30.8 bits (68), Expect = 0.86
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
 Frame = -2

Query: 331 EVHVSSRLG*CLEHPRDRLGVTDQIF-----RRGHCCWWNKTGIGLAELTSGGMLNS 176
           EV +S  LG C+E  +    V D I      RRG  CW+    +G+  +  G +L +
Sbjct: 113 EVFLSCALGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPQVGMVAINDGILLRN 169

>FPPS_CHICK (P08836) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)|
           (Farnesyl diphosphate synthetase) [Includes:
           Dimethylallyltranstransferase (EC 2.5.1.1);
           Geranyltranstransferase (EC 2.5.1.10)]
          Length = 367

 Score = 30.8 bits (68), Expect = 0.86
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
 Frame = -2

Query: 310 LG*CLEHPRDRLGVTDQIF-----RRGHCCWWNKTGIGLAELTSGGMLNS 176
           +G C+E  +    V D I      RRG  CW+ K G+GL  +    +L S
Sbjct: 102 VGWCIELFQAFFLVADDIMDQSLTRRGQLCWYKKEGVGLDAINDSFLLES 151

>FPPS_HUMAN (P14324) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)|
           (Farnesyl diphosphate synthetase) [Includes:
           Dimethylallyltranstransferase (EC 2.5.1.1);
           Geranyltranstransferase (EC 2.5.1.10)]
          Length = 353

 Score = 30.8 bits (68), Expect = 0.86
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
 Frame = -2

Query: 310 LG*CLEHPRDRLGVTDQIF-----RRGHCCWWNKTGIGLAELTSGGMLNS 176
           +G C+E  +    V D I      RRG  CW+ K G+GL  +    +L +
Sbjct: 88  VGWCVELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLDAINDANLLEA 137

>FPPS_ARTAN (P49350) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)|
           (Farnesyl diphosphate synthetase) [Includes:
           Dimethylallyltranstransferase (EC 2.5.1.1);
           Geranyltranstransferase (EC 2.5.1.10)]
          Length = 343

 Score = 30.8 bits (68), Expect = 0.86
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
 Frame = -2

Query: 331 EVHVSSRLG*CLEHPRDRLGVTDQIF-----RRGHCCWWNKTGIGLAELTSGGMLNS 176
           E+ +SS LG C+E  +    V D I      RRG  CW+    +G+     G +L +
Sbjct: 72  EIFLSSALGWCIEWLQAYFLVLDDIMDESHTRRGQPCWFRLPKVGMIAANDGILLRN 128

>BARH1_DROAN (P22544) Homeobox protein B-H1 (Homeobox BarH1 protein)|
          Length = 606

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = +1

Query: 142 TRDVPN*HPTRVSSTCPRKLAPQGRSPSYSTNSNGPDGRSGRSLPAC 282
           T  +P  HP+R  S  P    P  R PS  + +  P    GRS+ +C
Sbjct: 547 TGGMPPHHPSRPDSASPPLPLPLARPPSTPSPTLNPGSPPGRSVDSC 593

>FPPS1_LUPAL (P49351) Farnesyl pyrophosphate synthetase 1 (FPP synthetase 1)|
           (FPS 1) (Farnesyl diphosphate synthetase 1) [Includes:
           Dimethylallyltranstransferase (EC 2.5.1.1);
           Geranyltranstransferase (EC 2.5.1.10)]
          Length = 342

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
 Frame = -2

Query: 331 EVHVSSRLG*CLEHPRDRLGVTDQIF-----RRGHCCWWNKTGIGLAELTSGGMLNS 176
           E+ ++S LG C+E  +    V D I      RRG  CW+    +G+     G +L +
Sbjct: 71  EIFLASALGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFRVPKVGMIAANDGVLLRN 127

>FPPS_MOUSE (Q920E5) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)|
           (Farnesyl diphosphate synthetase) (Cholesterol-regulated
           39 kDa protein) (CR 39) [Includes:
           Dimethylallyltranstransferase (EC 2.5.1.1);
           Geranyltranstransferase (EC 2.5.1.10)]
          Length = 353

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
 Frame = -2

Query: 310 LG*CLEHPRDRLGVTDQIF-----RRGHCCWWNKTGIGLAELTSGGMLNS 176
           +G C+E  +    V+D I      RRG  CW+ K GIGL  +    +L +
Sbjct: 88  VGWCVELLQAFFLVSDDIMDSSLTRRGQICWYQKPGIGLDAINDALLLEA 137

>FPPS_RAT (P05369) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)|
           (Farnesyl diphosphate synthetase) (Cholesterol-regulated
           39 kDa protein) (CR 39) [Includes:
           Dimethylallyltranstransferase (EC 2.5.1.1);
           Geranyltranstransferase (EC 2.5.1.10)]
          Length = 353

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
 Frame = -2

Query: 310 LG*CLEHPRDRLGVTDQIF-----RRGHCCWWNKTGIGLAELTSGGMLNS 176
           +G C+E  +    V D I      RRG  CW+ K GIGL  +    +L +
Sbjct: 88  VGWCVELLQAFFLVLDDIMDSSYTRRGQICWYQKPGIGLDAINDALLLEA 137

>FPPS_HELAN (O64905) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)|
           (Farnesyl diphosphate synthetase) [Includes:
           Dimethylallyltranstransferase (EC 2.5.1.1);
           Geranyltranstransferase (EC 2.5.1.10)]
          Length = 341

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
 Frame = -2

Query: 331 EVHVSSRLG*CLEHPRDRLGVTDQIF-----RRGHCCWWNKTGIGLAELTSGGMLNS 176
           E+ ++S LG C+E  +    V D I      RRG  CW+    +G+     G +L +
Sbjct: 71  EIFLASALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRLPKVGMIAANDGLILRN 127

>WBP11_BRARE (Q6P0D5) WW domain-binding protein 11 (WBP-11)|
          Length = 640

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = +1

Query: 184 TCPRKLAPQGRSPSYSTNSNGPDGRSGRSLPACRGDARDITPTGRKR 324
           + P  + P+ +SP+ S+N   P G + +  P     A  + PT  KR
Sbjct: 496 SAPPSIVPRQKSPAASSNEGAPSGSALQMPPPPGTTANPLAPTIEKR 542

>KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)|
           (Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase)
           (Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3
           protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein)
           (AtAAA1)
          Length = 523

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 19/61 (31%), Positives = 23/61 (37%)
 Frame = +1

Query: 142 TRDVPN*HPTRVSSTCPRKLAPQGRSPSYSTNSNGPDGRSGRSLPACRGDARDITPTGRK 321
           TRDV +  P R   T  RK    G      T   GP  R GR     +  A   + T  K
Sbjct: 128 TRDVTSRRPARAGQTGTRKSPQDGAWARGPTTRTGPASRGGRGGATSKSTAGARSSTAGK 187

Query: 322 R 324
           +
Sbjct: 188 K 188

>FPPS_NEUCR (Q92250) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)|
           (Farnesyl diphosphate synthetase) [Includes:
           Dimethylallyltranstransferase (EC 2.5.1.1);
           Geranyltranstransferase (EC 2.5.1.10)]
          Length = 347

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -2

Query: 259 IFRRGHCCWWNKTGIGLAELTSGGMLNS 176
           I RRG  CW+ + G+G+  +    ML S
Sbjct: 102 ITRRGKPCWYRQEGVGMVAINDAFMLES 129

>FPPS_GIBFU (Q92235) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)|
           (Farnesyl diphosphate synthetase) [Includes:
           Dimethylallyltranstransferase (EC 2.5.1.1);
           Geranyltranstransferase (EC 2.5.1.10)]
          Length = 347

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -2

Query: 259 IFRRGHCCWWNKTGIGLAELTSGGMLNS 176
           I RRG  CW+ + G+G+  +    ML S
Sbjct: 102 ITRRGQPCWYRQEGVGMIAINDAFMLES 129

>NXL2_NAJNA (P25669) Long neurotoxin 2 (Toxin B)|
          Length = 71

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 18/67 (26%), Positives = 28/67 (41%)
 Frame = +1

Query: 124 VTHQTNTRDVPN*HPTRVSSTCPRKLAPQGRSPSYSTNSNGPDGRSGRSLPACRGDARDI 303
           +T    ++D PN H     + C    + +G+       +  P  R+G  +  C  D  D 
Sbjct: 5   ITPDITSKDCPNGHVCYTKTWCDGFCSSRGKRVDLGCAATCPTVRTGVDIQCCSTDDCDP 64

Query: 304 TPTGRKR 324
            PT RKR
Sbjct: 65  FPT-RKR 70

>TSH2_MOUSE (Q68FE9) Teashirt homolog 2 (Zinc finger protein 218)|
           (SDCCAG33-like protein)
          Length = 1030

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
 Frame = +3

Query: 81  VKNQDPVHDGLTKQCDAPNKH*RRSELASDEGE----FNMPPEVSSARPIPVLFHQQQWP 248
           VK +    D + KQC   + H   +  +  EGE       P E   A P P L  +++  
Sbjct: 600 VKKETEDKDEVVKQCGKESPHEEATSFSQPEGESFSKIEPPSESRKAEPCP-LKEEEKPQ 658

Query: 249 RRKIWSVTP--SLSRGCS 296
           + K   + P  SL+ GC+
Sbjct: 659 KEKPEPLEPVSSLTNGCA 676

>SYP1_YEAST (P25623) Suppressor of yeast profilin deletion|
          Length = 870

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +1

Query: 133 QTNTRDVPN*HPTRVSSTCPRKLAPQGRSPSYSTNSN 243
           Q +  + PN   TRVSST    +  + R P+YS++ +
Sbjct: 369 QASITETPNNSSTRVSSTATSSIYQKQRRPTYSSSKS 405

>FPPS1_PARAR (O24241) Farnesyl pyrophosphate synthetase 1 (FPP synthetase 1)|
           (FPS 1) (Farnesyl diphosphate synthetase 1) [Includes:
           Dimethylallyltranstransferase (EC 2.5.1.1);
           Geranyltranstransferase (EC 2.5.1.10)]
          Length = 342

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
 Frame = -2

Query: 331 EVHVSSRLG*CLEHPRDRLGVTDQIF-----RRGHCCWWNKTGIGLAELTSGGMLNS 176
           E+ +++ LG C+E  +    V D I      RRG  CW+    +G+     G +L +
Sbjct: 71  EIFLAAALGWCIEWLQAYFLVLDDIMDESHTRRGQPCWFRLPKVGMIAANDGIILRN 127

>YAP1_HUMAN (P46937) 65 kDa Yes-associated protein (YAP65)|
          Length = 454

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
 Frame = +1

Query: 190 PRKLAPQGRS--PSYSTNSNGPDGRSGRSLPACRGDARDITPTGRKRVLLHIR 342
           P + APQG+   PS      GP    G+  PA    A    P G +  ++H+R
Sbjct: 8   PPQPAPQGQGQPPSQPPQGQGPPSGPGQPAPAATQAAPQAPPAGHQ--IVHVR 58

>CWC22_SCHPO (Q9P6R9) Pre-mRNA-splicing factor cwc22 (Complexed with cdc5|
           protein 22) (Cell cycle control protein cwf22)
          Length = 834

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = +1

Query: 193 RKLAPQGRSPSYSTNSNGPDGRSGRSLPACRGDARDITPTGR 318
           R+L+P+GR  S + NS        RS    RG +R  TP GR
Sbjct: 679 RELSPRGRERSSNRNSYSD---LSRSSSLSRGRSRSYTPEGR 717

>CRYAA_ORYLA (O73919) Alpha crystallin A chain (Fragment)|
          Length = 145

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +1

Query: 238 SNGPDGRSGRSLPACR 285
           + GP+GRS RS+P CR
Sbjct: 130 AGGPNGRSDRSIPVCR 145

>LRIG1_HUMAN (Q96JA1) Leucine-rich repeats and immunoglobulin-like domains protein|
            1 precursor (LIG-1)
          Length = 1093

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
 Frame = +1

Query: 163  HPTRVSSTCPRKLAPQGRSPSYSTNSNGPDGRSGR----SLPACRGDARDITPTGRKRVL 330
            HP  VS    +  AP G  P  S   + P  +  R    S P C+G    + P+   R+L
Sbjct: 948  HPQPVSRDSAQPSAPNGPEPGGSDQEHSPHHQCSRTAAGSCPECQG---SLYPSNHDRML 1004

Query: 331  LHIR 342
              ++
Sbjct: 1005 TAVK 1008

>ENAM_MOUSE (O55196) Enamelin precursor|
          Length = 1274

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 15/42 (35%), Positives = 18/42 (42%)
 Frame = +1

Query: 190 PRKLAPQGRSPSYSTNSNGPDGRSGRSLPACRGDARDITPTG 315
           P    P    P  STNS  PD  + +S+P    D   I  TG
Sbjct: 237 PEDPPPDDPPPEASTNSTVPDANATQSIPEGGNDTSPIGNTG 278

>NXL1_NAJNA (P25668) Long neurotoxin 1 (Toxin A)|
          Length = 71

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 18/67 (26%), Positives = 28/67 (41%)
 Frame = +1

Query: 124 VTHQTNTRDVPN*HPTRVSSTCPRKLAPQGRSPSYSTNSNGPDGRSGRSLPACRGDARDI 303
           +T    ++D PN H     + C    + +G+       +  P  R+G  +  C  D  D 
Sbjct: 5   ITPDITSKDCPNGHVCYTKTWCDGFCSIRGKRVDLGCAATCPTVRTGVDIQCCSTDDCDP 64

Query: 304 TPTGRKR 324
            PT RKR
Sbjct: 65  FPT-RKR 70

>FPPS2_PARAR (O24242) Farnesyl pyrophosphate synthetase 2 (FPP synthetase 2)|
           (FPS 2) (Farnesyl diphosphate synthetase 2) [Includes:
           Dimethylallyltranstransferase (EC 2.5.1.1);
           Geranyltranstransferase (EC 2.5.1.10)]
          Length = 342

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
 Frame = -2

Query: 331 EVHVSSRLG*CLEHPRDRLGVTDQIF-----RRGHCCWWNKTGIGLAELTSGGMLNS 176
           E+  +S LG C+E  +    V D I      RRG  CW+    +G+     G +L +
Sbjct: 71  EIFHASALGWCVEWLQAYFLVLDDIMDESHTRRGQPCWFRLPKVGMIAANDGIILRN 127

>ZEP2_HUMAN (P31629) Human immunodeficiency virus type I enhancer-binding|
           protein 2 (HIV-EP2) (MHC-binding protein 2) (MBP-2)
          Length = 2446

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +3

Query: 213 PIPVLFHQQQWPRRKIWSVTPSLSRGCSRHHPNREETCTSAH 338
           P P+  H   +PR+KI S+ P+ S+   +     EE     H
Sbjct: 140 PFPIHGHSGGYPRKKISSLNPAYSQYSQKSIEQAEEAHKKEH 181


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,961,424
Number of Sequences: 219361
Number of extensions: 1187285
Number of successful extensions: 3082
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 2951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3082
length of database: 80,573,946
effective HSP length: 91
effective length of database: 60,612,095
effective search space used: 1454690280
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)