>DRC1A_CHICK (Q5ZM13) Down-regulated by CTNNB1 protein A|
          Length = 515

 Score = 32.0 bits (71), Expect = 0.68
 Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 10/63 (15%)
 Frame = +3

Query: 6   TNTYFIYSYK-VANITVLNNMPEKSGT---------CQEKTTIKGCSRQALVCASRRPDP 155
           T T F  S++ V+ +TV NN    SGT          QE+  I G  R  L   S++P+ 
Sbjct: 443 TTTVFSKSFEQVSGVTVANNRGGVSGTEANRFSACSLQEEKLIYGTERTDLPVLSKQPNQ 502

Query: 156 QRP 164
           QRP
Sbjct: 503 QRP 505

>US17_HCMVA (P09716) Hypothetical protein HVLF1|
          Length = 293

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
 Frame = -1

Query: 402 LVSSVIFSLLHG*EVAGASSSGWSPGLLILERLLACLVDI-------DIVIEFGSVSMLR 244
           +V ++  +LLHG    G+ +S  SPGLL +  +L  L  I         ++ F   S L 
Sbjct: 86  MVPTICLALLHGKRDEGSFTSPPSPGLLTIYSVLTTLSVIVASACSSSTLVTF---SGLL 142

Query: 243 SCVLFSLVCVWCHVGL 196
           +CVLFSL    C  GL
Sbjct: 143 ACVLFSLCS--CVTGL 156

>NINJ1_HUMAN (Q92982) Ninjurin-1 (Nerve injury-induced protein 1)|
          Length = 152

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 297 MPTGVPGSANLETSRWSWR 353
           +P G PGS +   +RW WR
Sbjct: 14  LPPGTPGSPDASPARWGWR 32

>CSTA_HELPY (P56190) Carbon starvation protein A homolog|
          Length = 687

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
 Frame = -1

Query: 345 SSGWSPGLLILERLLACLVDIDIVIEFGSVSMLRSCVLFSLVCVWC-HVGLLFSCGSS*E 169
           SSG +P +L  E           ++ +GS+ M     L +LVC    H GL F+  S  E
Sbjct: 346 SSGTTPKMLAKESDAR-------LVGYGSMVMESVVALMALVCAGILHPGLYFAINSP-E 397

Query: 168 CLVFGDLAVARRILEPGGYNL 106
             +  D+A A  ++   G+N+
Sbjct: 398 VSIGKDIADAASVISSWGFNI 418

>YO83_CAEEL (P34619) Hypothetical protein ZK1236.3|
          Length = 1000

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +3

Query: 69  EKSGTCQEKTTIKGCSRQALVCASRRPDP 155
           EKSG      TIK  +   L+C SR+ DP
Sbjct: 805 EKSGRLNVSNTIKAINEYRLLCNSRQADP 833

>CYB_CAEEL (P24890) Cytochrome b|
          Length = 370

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
 Frame = -1

Query: 225 LVCVWCHVGLLFSCGSS*ECLVFGD---LAVARRILEPGGYNL-LWLFFLDRSLIFP 67
           LV V  H+  L S GS+      GD   +  +   L    YN+ +WL F+  SLI+P
Sbjct: 187 LVIVLGHLIFLHSTGSTSSLYCHGDYDKVCFSPEYLGKDAYNIVIWLLFIVLSLIYP 243

>VCLC_PEA (P13918) Vicilin precursor|
          Length = 459

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = +3

Query: 102 IKGCSRQALVCASRRPDPQRPDIPKRNR 185
           + G S  A VC S R DPQ P I K N+
Sbjct: 15  LMGISFLASVCVSSRSDPQNPFIFKSNK 42

>OTOF_MOUSE (Q9ESF1) Otoferlin (Fer-1-like protein 2)|
          Length = 1997

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
 Frame = +2

Query: 125 SSMRLATARSPKTRHS*EEPQEKSNPXXXXXXXRENNTQDLNILTDPNSITI-SISTRHA 301
           S+M+L   RS K     EEPQ +  P        ++    L    DP+S+++ S++   +
Sbjct: 176 SAMKLGKTRSHK-----EEPQRQDEPAVLEMEDLDHLAIQLGDGLDPDSVSLASVTALTS 230

Query: 302 NRRSRISKP 328
           N  ++ SKP
Sbjct: 231 NVSNKRSKP 239


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,539,026
Number of Sequences: 219361
Number of extensions: 1146604
Number of successful extensions: 2846
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2846
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2570413340
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)