>gb|BT009400.1| Triticum aestivum clone wlm96.pk044.g9:fis, full insert mRNA sequence
          Length = 1993

 Score =  504 bits (254), Expect = e-139
 Identities = 346/377 (91%), Gaps = 16/377 (4%)
 Strand = Plus / Minus

                                                                        
Query: 39   aaatctgatcaaacttgccataatcaaccaacacctacttttatctagtccctctacttt 98
            |||||||||||||||||  |||||||||||| ||||||||| |||||| |||||||||||
Sbjct: 1975 aaatctgatcaaacttgttataatcaaccaatacctactttgatctagcccctctacttt 1916

                                                                        
Query: 99   ccataactcataagtacaagacttgccatgtactaa---atcaacacattcaatacctcc 155
                   ||||||||||||||||||| |||||||||   |||||||||||||||| ||||
Sbjct: 1915 -------tcataagtacaagacttgctatgtactaataaatcaacacattcaatatctcc 1863

                                                                        
Query: 156  tttgatctagtagctctactcatgagtataagaacttgctatgtactgaattaacacact 215
            ||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||
Sbjct: 1862 tttgatctagttgctctactcacaagtataagaacttgctatgtactgaattaacacact 1803

                                                                        
Query: 216  ttccgcaaaaagaac------ttgtggctggtttgtctacagaagttaaaaattctcctt 269
            ||| ||||||||| |      |||||||||| | ||||||||||||||||||||||||||
Sbjct: 1802 ttcggcaaaaagagcaacttcttgtggctgggtcgtctacagaagttaaaaattctcctt 1743

                                                                        
Query: 270  gtggaactcgaattttgtgtttgtctttctcgagaaatcttgtgcaagctcacgcagctc 329
            |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1742 gtggaactcgaattttgtgtttgtctttctcgagaaatcttgtgcaaggtcacgcagctc 1683

                                                                        
Query: 330  ctttgttagcaccggtgcaccgcagtagaatactccgacacgctgttcacggtggttgag 389
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1682 ctttgttagcaccggtgcaccgcagtagaatactccgacacgctgttcacggtggttgag 1623

                             
Query: 390  ggcgatacgcttgtaga 406
            |||||||||||||||||
Sbjct: 1622 ggcgatacgcttgtaga 1606

>gb|BT009119.1| Triticum aestivum clone wl1n.pk0005.c8:fis, full insert mRNA
           sequence
          Length = 543

 Score =  113 bits (57), Expect = 5e-22
 Identities = 123/145 (84%)
 Strand = Plus / Minus

                                                                       
Query: 262 ttctccttgtggaactcgaattttgtgtttgtctttctcgagaaatcttgtgcaagctca 321
           |||||||||||||||||||| || ||||| ||||| | |||||| || || || ||||| 
Sbjct: 370 ttctccttgtggaactcgaacttggtgttggtcttccgcgagaagtcctgcgccagctcg 311

                                                                       
Query: 322 cgcagctcctttgttagcaccggtgcaccgcagtagaatactccgacacgctgttcacgg 381
           ||||||||||| || |||||||| || ||||||||||| |||||||| ||||| |   ||
Sbjct: 310 cgcagctccttggtcagcaccggggcgccgcagtagaacactccgacgcgctggttctgg 251

                                    
Query: 382 tggttgagggcgatacgcttgtaga 406
           |||||||| ||||| ||||||||||
Sbjct: 250 tggttgagcgcgatgcgcttgtaga 226

>gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0080I08,
              complete sequence
          Length = 197156

 Score =  105 bits (53), Expect = 1e-19
 Identities = 89/101 (88%)
 Strand = Plus / Plus

                                                                          
Query: 259    aaattctccttgtggaactcgaattttgtgtttgtctttctcgagaaatcttgtgcaagc 318
              ||||||||||||||||| |||||||| ||| | |||||||||||||||||||| || |||
Sbjct: 188373 aaattctccttgtggaagtcgaatttcgtgctcgtctttctcgagaaatcttgagcgagc 188432

                                                       
Query: 319    tcacgcagctcctttgttagcaccggtgcaccgcagtagaa 359
              |||||||| ||||| || |||||||| || || ||||||||
Sbjct: 188433 tcacgcagttccttcgtcagcaccggcgcgccacagtagaa 188473



 Score = 48.1 bits (24), Expect = 0.022
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 379    cggtggttgagggcgatacgcttgtaga 406
              ||||||||||||||||| ||||||||||
Sbjct: 189599 cggtggttgagggcgatgcgcttgtaga 189626

>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0041J17, complete sequence
          Length = 148829

 Score =  105 bits (53), Expect = 1e-19
 Identities = 89/101 (88%)
 Strand = Plus / Plus

                                                                         
Query: 259   aaattctccttgtggaactcgaattttgtgtttgtctttctcgagaaatcttgtgcaagc 318
             ||||||||||||||||| |||||||| ||| | |||||||||||||||||||| || |||
Sbjct: 27728 aaattctccttgtggaagtcgaatttcgtgctcgtctttctcgagaaatcttgagcgagc 27787

                                                      
Query: 319   tcacgcagctcctttgttagcaccggtgcaccgcagtagaa 359
             |||||||| ||||| || |||||||| || || ||||||||
Sbjct: 27788 tcacgcagttccttcgtcagcaccggcgcgccacagtagaa 27828



 Score = 48.1 bits (24), Expect = 0.022
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 379   cggtggttgagggcgatacgcttgtaga 406
             ||||||||||||||||| ||||||||||
Sbjct: 28954 cggtggttgagggcgatgcgcttgtaga 28981

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  105 bits (53), Expect = 1e-19
 Identities = 89/101 (88%)
 Strand = Plus / Plus

                                                                            
Query: 259      aaattctccttgtggaactcgaattttgtgtttgtctttctcgagaaatcttgtgcaagc 318
                ||||||||||||||||| |||||||| ||| | |||||||||||||||||||| || |||
Sbjct: 18924357 aaattctccttgtggaagtcgaatttcgtgctcgtctttctcgagaaatcttgagcgagc 18924416

                                                         
Query: 319      tcacgcagctcctttgttagcaccggtgcaccgcagtagaa 359
                |||||||| ||||| || |||||||| || || ||||||||
Sbjct: 18924417 tcacgcagttccttcgtcagcaccggcgcgccacagtagaa 18924457



 Score = 48.1 bits (24), Expect = 0.022
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 379      cggtggttgagggcgatacgcttgtaga 406
                ||||||||||||||||| ||||||||||
Sbjct: 18925583 cggtggttgagggcgatgcgcttgtaga 18925610

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  105 bits (53), Expect = 1e-19
 Identities = 89/101 (88%)
 Strand = Plus / Plus

                                                                            
Query: 259      aaattctccttgtggaactcgaattttgtgtttgtctttctcgagaaatcttgtgcaagc 318
                ||||||||||||||||| |||||||| ||| | |||||||||||||||||||| || |||
Sbjct: 19083179 aaattctccttgtggaagtcgaatttcgtgctcgtctttctcgagaaatcttgagcgagc 19083238

                                                         
Query: 319      tcacgcagctcctttgttagcaccggtgcaccgcagtagaa 359
                |||||||| ||||| || |||||||| || || ||||||||
Sbjct: 19083239 tcacgcagttccttcgtcagcaccggcgcgccacagtagaa 19083279



 Score = 48.1 bits (24), Expect = 0.022
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 379      cggtggttgagggcgatacgcttgtaga 406
                ||||||||||||||||| ||||||||||
Sbjct: 19084405 cggtggttgagggcgatgcgcttgtaga 19084432

>gb|AY603975.1| Oryza sativa (indica cultivar-group) respiratory burst oxidase
            protein B (rbohB) mRNA, complete cds
          Length = 3334

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 262  ttctccttgtggaactcgaattttgtgtttgtctt 296
            |||||||||||||| || ||| |||||||||||||
Sbjct: 3006 ttctccttgtggaaatcaaatcttgtgtttgtctt 2972

>gb|BT009144.1| Triticum aestivum clone wl1n.pk0054.d8:fis, full insert mRNA
           sequence
          Length = 876

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 262 ttctccttgtggaactcgaattttgtgtttgtctt 296
           ||||||||||||||||| || |||||||| |||||
Sbjct: 567 ttctccttgtggaactcaaactttgtgttcgtctt 533

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 262      ttctccttgtggaactcgaattttgtgtttgtctt 296
                |||||||||||||| || ||| |||||||||||||
Sbjct: 14604506 ttctccttgtggaaatcaaatcttgtgtttgtctt 14604540

>dbj|AP003444.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1164G11
          Length = 142699

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 262   ttctccttgtggaactcgaattttgtgtttgtctt 296
             |||||||||||||| || ||| |||||||||||||
Sbjct: 85883 ttctccttgtggaaatcaaatcttgtgtttgtctt 85917

>dbj|AP003275.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0514H03
          Length = 167230

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                 
Query: 262    ttctccttgtggaactcgaattttgtgtttgtctt 296
              |||||||||||||| || ||| |||||||||||||
Sbjct: 163819 ttctccttgtggaaatcaaatcttgtgtttgtctt 163853

>dbj|AK121916.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106C16, full
            insert sequence
          Length = 3255

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 262  ttctccttgtggaactcgaattttgtgtttgtctt 296
            |||||||||||||| || ||| |||||||||||||
Sbjct: 3079 ttctccttgtggaaatcaaatcttgtgtttgtctt 3045

>dbj|AK099714.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013084G19, full
            insert sequence
          Length = 3731

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 262  ttctccttgtggaactcgaattttgtgtttgtctt 296
            |||||||||||||| || ||| |||||||||||||
Sbjct: 3598 ttctccttgtggaaatcaaatcttgtgtttgtctt 3564

>dbj|AK065117.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001O12, full
            insert sequence
          Length = 3198

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 262  ttctccttgtggaactcgaattttgtgtttgtctt 296
            |||||||||||||| || ||| |||||||||||||
Sbjct: 3082 ttctccttgtggaaatcaaatcttgtgtttgtctt 3048

>dbj|AK060770.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-B03, full
            insert sequence
          Length = 2978

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 262  ttctccttgtggaactcgaattttgtgtttgtctt 296
            |||||||||||||| || ||| |||||||||||||
Sbjct: 2719 ttctccttgtggaaatcaaatcttgtgtttgtctt 2685

>gb|AY107147.1| Zea mays PCO125081 mRNA sequence
          Length = 938

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 262 ttctccttgtggaactcgaattttgtgtttgtctt 296
           |||||||||||||||||||| || || ||||||||
Sbjct: 638 ttctccttgtggaactcgaacttagtatttgtctt 604

>emb|CT010504.7| M.truncatula DNA sequence from clone MTH2-28A3 on chromosome 3,
             complete sequence
          Length = 114882

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 259   aaattctccttgtggaactcgaattttgtgtttgtctt 296
             ||||||||||||||||| || ||||| ||| |||||||
Sbjct: 86413 aaattctccttgtggaaatcaaatttggtgcttgtctt 86376

>gb|AC121344.5| Homo sapiens X BAC RP11-408N23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 111500

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 12    ttattattcttctaggcaaagttga 36
             |||||||||| ||||||||||||||
Sbjct: 46191 ttattattctcctaggcaaagttga 46167

>gb|CP000082.1| Psychrobacter arcticus 273-4, complete genome
          Length = 2650701

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 310     tgtgcaagctcacgcagctc 329
               ||||||||||||||||||||
Sbjct: 1139119 tgtgcaagctcacgcagctc 1139100

>gb|AC122835.3| Mus musculus BAC clone RP23-187I18 from 3, complete sequence
          Length = 218449

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 247   tacagaagttaaaaattctc 266
             ||||||||||||||||||||
Sbjct: 81321 tacagaagttaaaaattctc 81340

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 252     aagttaaaaattctccttgt 271
               ||||||||||||||||||||
Sbjct: 8634912 aagttaaaaattctccttgt 8634893

>dbj|AP000797.6| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-36B5, complete
             sequence
          Length = 148490

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 184   taagaacttgctatgtactg 203
             ||||||||||||||||||||
Sbjct: 67835 taagaacttgctatgtactg 67854

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 252     aagttaaaaattctccttgt 271
               ||||||||||||||||||||
Sbjct: 8634795 aagttaaaaattctccttgt 8634776

>emb|AL844877.2|CNS08CB0 Oryza sativa chromosome 12, . BAC OSJNBb0034B07 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 125000

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 252   aagttaaaaattctccttgt 271
             ||||||||||||||||||||
Sbjct: 97659 aagttaaaaattctccttgt 97640

>emb|AL807250.9| Mouse DNA sequence from clone RP23-99K18 on chromosome X, complete
             sequence
          Length = 141025

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 241   tttgtctacagaagttaaaa 260
             ||||||||||||||||||||
Sbjct: 33596 tttgtctacagaagttaaaa 33577


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,489,088
Number of Sequences: 3902068
Number of extensions: 3489088
Number of successful extensions: 77121
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76961
Number of HSP's gapped (non-prelim): 158
length of query: 406
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 384
effective length of database: 17,147,199,772
effective search space: 6584524712448
effective search space used: 6584524712448
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)