ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl27f10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12) 82 2e-16
2LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12) 73 1e-13
3LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12) 69 4e-12
4LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase... 65 4e-11
5LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygena... 64 7e-11
6LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12) 54 9e-08
7LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12) 54 1e-07
8LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94) 53 2e-07
9LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12) 52 5e-07
10LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12) 49 4e-06
11LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2) 49 4e-06
12LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12) 48 7e-06
13LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12) 48 7e-06
14LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1) 48 7e-06
15LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12) 47 9e-06
16LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3) 47 9e-06
17LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12) 45 6e-05
18LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12) 42 3e-04
19LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment) 41 8e-04
20LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precur... 40 0.001
21LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1... 39 0.003
22LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC... 39 0.003
23LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC... 39 0.004
24LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12) 36 0.020
25LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12) 34 0.075
26LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC... 34 0.098
27ATF2_MOUSE (P16951) Cyclic AMP-dependent transcription factor AT... 32 0.49
28ATF2_HUMAN (P15336) Cyclic AMP-dependent transcription factor AT... 31 0.63
29ATF2_CHICK (O93602) Cyclic AMP-dependent transcription factor AT... 31 0.63
30GATA6_HUMAN (Q92908) Transcription factor GATA-6 (GATA-binding f... 31 0.83
31LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13... 30 1.1
32ATF2_RAT (Q00969) Cyclic AMP-dependent transcription factor ATF-... 30 1.8
33HXA1_MOUSE (P09022) Homeobox protein Hox-A1 (Hox-1.6) (Homeotic ... 29 2.4
34C18AA_PAEPP (Q45358) Parasporal crystal protein cry18Aa (Paraspo... 29 3.2
35YF1M_CAEEL (Q21874) Hypothetical protein R09E10.5 precursor 29 3.2
36DDLA_SHIFL (P0A6K0) D-alanine--D-alanine ligase A (EC 6.3.2.4) (... 28 5.4
37DDLA_ECOLI (P0A6J8) D-alanine--D-alanine ligase A (EC 6.3.2.4) (... 28 5.4
38DDLA_ECOL6 (Q8FKE3) D-alanine--D-alanine ligase A (EC 6.3.2.4) (... 28 5.4
39DDLA_ECO57 (P0A6J9) D-alanine--D-alanine ligase A (EC 6.3.2.4) (... 28 5.4
40AHC1_YEAST (Q12433) Protein AHC1 (ADA HAT complex component 1) 28 5.4
41HIPK4_RAT (Q4V793) Homeodomain-interacting protein kinase 4 (EC ... 28 7.0
42YO25_CAEEL (P34675) Hypothetical protein ZK688.5 28 7.0
43QIN_AVIS3 (P56260) Transforming protein Qin (Oncogene Qin) 28 7.0
44FOXGB_CHICK (Q90964) Forkhead box protein G1B (Forkhead-related ... 28 7.0
45VGLM_EBV (P03215) Glycoprotein M 28 7.0
46GDS1_YEAST (P41913) Protein GDS1 28 7.0
47VNUA_PRVKA (P33485) Probable nuclear antigen 25 8.0
48SORL_CHICK (Q98930) Sortilin-related receptor (Sorting protein-r... 27 9.2
49GLTL2_MOUSE (Q9D2N8) Polypeptide N-acetylgalactosaminyltransfera... 27 9.2

>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)|
          Length = 877

 Score = 82.4 bits (202), Expect = 2e-16
 Identities = 39/48 (81%), Positives = 41/48 (85%)
 Frame = -1

Query: 382 DMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 239
           DMN + ALKNRNGPVKMPYMLLYPNTSD   EK  GLTAMGIPNS+SI
Sbjct: 830 DMNGNSALKNRNGPVKMPYMLLYPNTSDVTKEKGQGLTAMGIPNSISI 877



to top

>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 862

 Score = 73.2 bits (178), Expect = 1e-13
 Identities = 36/47 (76%), Positives = 37/47 (78%)
 Frame = -1

Query: 379 MNKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 239
           MN DP LKNRNGP K PYMLLYPNTSD  G  A GLTA GIPNS+SI
Sbjct: 817 MNHDPELKNRNGPAKFPYMLLYPNTSDHKG-AAAGLTAKGIPNSISI 862



to top

>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)|
          Length = 866

 Score = 68.6 bits (166), Expect = 4e-12
 Identities = 33/47 (70%), Positives = 36/47 (76%)
 Frame = -1

Query: 379 MNKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 239
           MN D  LKNRNGP + PYMLLYPNTSD  G  A G+TA GIPNS+SI
Sbjct: 821 MNGDAGLKNRNGPAEFPYMLLYPNTSDVTG-AAAGITAKGIPNSISI 866



to top

>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)|
          Length = 870

 Score = 65.1 bits (157), Expect = 4e-11
 Identities = 32/47 (68%), Positives = 35/47 (74%)
 Frame = -1

Query: 379 MNKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 239
           MNKDP  KNR GP   PY LLYPNTSD  G+ A GL+A GIPNS+SI
Sbjct: 825 MNKDPHRKNRVGPTNFPYTLLYPNTSDLKGD-AAGLSARGIPNSISI 870



to top

>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)|
          Length = 863

 Score = 64.3 bits (155), Expect = 7e-11
 Identities = 31/48 (64%), Positives = 36/48 (75%)
 Frame = -1

Query: 382 DMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 239
           +MNKDP LKNR GP   PY L++PNTSD  G  A G+TA GIPNS+SI
Sbjct: 817 NMNKDPLLKNRVGPANFPYTLMFPNTSDNKG-AAEGITARGIPNSISI 863



to top

>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 862

 Score = 53.9 bits (128), Expect = 9e-08
 Identities = 27/46 (58%), Positives = 31/46 (67%)
 Frame = -1

Query: 376 NKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 239
           NKD +L+NRNGPVKMPY +L P   D       GLT  GIPNS+SI
Sbjct: 823 NKDSSLRNRNGPVKMPYTVLLPTCEDE------GLTFRGIPNSISI 862



to top

>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)|
          Length = 866

 Score = 53.5 bits (127), Expect = 1e-07
 Identities = 26/46 (56%), Positives = 32/46 (69%)
 Frame = -1

Query: 376 NKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 239
           N D +L+NR GPVKMPY LLYP++ +       GLT  GIPNS+SI
Sbjct: 828 NNDESLRNRYGPVKMPYTLLYPSSEE-------GLTCRGIPNSISI 866



to top

>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)|
          Length = 853

 Score = 53.1 bits (126), Expect = 2e-07
 Identities = 26/48 (54%), Positives = 32/48 (66%)
 Frame = -1

Query: 382 DMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 239
           + NKD  L+NR GP KMPY LLYP++ +       GLT  GIPNS+SI
Sbjct: 813 EKNKDETLRNRYGPAKMPYTLLYPSSEE-------GLTFRGIPNSISI 853



to top

>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)|
          Length = 861

 Score = 51.6 bits (122), Expect = 5e-07
 Identities = 25/46 (54%), Positives = 32/46 (69%)
 Frame = -1

Query: 376 NKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 239
           N D  L+NR+GPV+MPY LLYP++ +       GLT  GIPNS+SI
Sbjct: 823 NNDEKLRNRHGPVEMPYTLLYPSSKE-------GLTFRGIPNSISI 861



to top

>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)|
          Length = 864

 Score = 48.5 bits (114), Expect = 4e-06
 Identities = 23/46 (50%), Positives = 32/46 (69%)
 Frame = -1

Query: 376 NKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 239
           N DP+L+NR GPV++PY LL+ ++ +       GLT  GIPNS+SI
Sbjct: 826 NSDPSLRNRTGPVQLPYTLLHRSSEE-------GLTFKGIPNSISI 864



to top

>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)|
          Length = 865

 Score = 48.5 bits (114), Expect = 4e-06
 Identities = 24/46 (52%), Positives = 30/46 (65%)
 Frame = -1

Query: 376 NKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 239
           N D +L NR GPV++PY LL+PN+         GLT  GIPNS+SI
Sbjct: 828 NNDQSLSNRLGPVQLPYTLLHPNSE--------GLTCRGIPNSISI 865



to top

>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)|
          Length = 859

 Score = 47.8 bits (112), Expect = 7e-06
 Identities = 24/47 (51%), Positives = 30/47 (63%)
 Frame = -1

Query: 379 MNKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 239
           MN   + KNR+GPV +PY LL+P + +       GLT  GIPNSVSI
Sbjct: 820 MNSHKSWKNRSGPVNVPYTLLFPTSEE-------GLTGKGIPNSVSI 859



to top

>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 859

 Score = 47.8 bits (112), Expect = 7e-06
 Identities = 25/48 (52%), Positives = 30/48 (62%)
 Frame = -1

Query: 382 DMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 239
           + N D  LKNR G VKMPY LL+P++         G+T  GIPNSVSI
Sbjct: 819 ERNDDETLKNRTGLVKMPYTLLFPSSEG-------GVTGRGIPNSVSI 859



to top

>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)|
          Length = 839

 Score = 47.8 bits (112), Expect = 7e-06
 Identities = 25/47 (53%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
 Frame = -1

Query: 376 NKDPALK-NRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 239
           N DP+L+ NR GPV++PY LLYP++ +       GLT  GIPNS+SI
Sbjct: 800 NNDPSLQGNRLGPVQLPYTLLYPSSEE-------GLTFRGIPNSISI 839



to top

>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)|
          Length = 864

 Score = 47.4 bits (111), Expect = 9e-06
 Identities = 23/46 (50%), Positives = 32/46 (69%)
 Frame = -1

Query: 376 NKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 239
           N DP+L +R GPV++PY LL+P++ +       GLT  GIPNS+SI
Sbjct: 826 NNDPSLYHRVGPVQLPYTLLHPSSKE-------GLTFRGIPNSISI 864



to top

>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)|
          Length = 857

 Score = 47.4 bits (111), Expect = 9e-06
 Identities = 24/48 (50%), Positives = 31/48 (64%)
 Frame = -1

Query: 382 DMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 239
           + N D  L+NR GPV+MPY LL P++ +       GLT  GIPNS+SI
Sbjct: 817 ERNNDEKLRNRCGPVQMPYTLLLPSSKE-------GLTFRGIPNSISI 857



to top

>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 861

 Score = 44.7 bits (104), Expect = 6e-05
 Identities = 24/46 (52%), Positives = 27/46 (58%)
 Frame = -1

Query: 376 NKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 239
           N D  L NR+GPV  PY LL+P +         GLT  GIPNSVSI
Sbjct: 823 NGDNILTNRSGPVNAPYTLLFPTSEG-------GLTGKGIPNSVSI 861



to top

>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)|
          Length = 860

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 23/46 (50%), Positives = 26/46 (56%)
 Frame = -1

Query: 376 NKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 239
           N +  L NR GPV  PY LL+P +         GLT  GIPNSVSI
Sbjct: 822 NGNNILTNRTGPVNAPYTLLFPTSEG-------GLTGKGIPNSVSI 860



to top

>LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment)|
          Length = 741

 Score = 40.8 bits (94), Expect = 8e-04
 Identities = 20/40 (50%), Positives = 24/40 (60%)
 Frame = -1

Query: 376 NKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGI 257
           N D  L+NR GP KMPY LLYP++ +       GLT  GI
Sbjct: 709 NNDETLRNRTGPAKMPYTLLYPSSEE-------GLTFRGI 741



to top

>LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precursor (EC|
            1.13.11.12)
          Length = 941

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 25/46 (54%), Positives = 28/46 (60%)
 Frame = -1

Query: 376  NKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 239
            NKD  LKNR G   +PY L+ P  SDA      G+T MGIPNS SI
Sbjct: 903  NKDRKLKNRCGAGILPYQLMKP-FSDA------GVTGMGIPNSTSI 941



to top

>LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1.13.11.12)|
          Length = 924

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 22/46 (47%), Positives = 26/46 (56%)
 Frame = -1

Query: 376  NKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 239
            NKD  LKNR G   +PY L+ P +         G+T MGIPNS SI
Sbjct: 886  NKDRKLKNRCGAGILPYQLMKPFSDS-------GVTGMGIPNSTSI 924



to top

>LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12)|
            (LOX-100) (LOX2:Hv:1)
          Length = 936

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
 Frame = -1

Query: 382  DMNKDPALKNRNGPVKMPYMLLYP---NTSDANGEKALGLTAMGIPNSVSI 239
            + N DP  KNR+G   +PY+LL P   + +D +      +  MGIPNS+SI
Sbjct: 886  EWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDGDPTDEKMVMEMGIPNSISI 936



to top

>LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC 1.13.11.12)|
            (LOX2:Hv:2)
          Length = 932

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 21/48 (43%), Positives = 30/48 (62%)
 Frame = -1

Query: 382  DMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 239
            + NKD + +NR+G   +PY+LL P   + N   A  +  MGIPNS+SI
Sbjct: 887  EWNKDDSRRNRHGAGVVPYVLLRP--LNGNPMDAKTVMEMGIPNSISI 932



to top

>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)|
          Length = 899

 Score = 36.2 bits (82), Expect = 0.020
 Identities = 18/46 (39%), Positives = 27/46 (58%)
 Frame = -1

Query: 376 NKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 239
           N DP+ +NR G   +PY L+ P++         G+T  G+PNSV+I
Sbjct: 861 NADPSRRNRCGAGVLPYELMAPSSGP-------GITCRGVPNSVTI 899



to top

>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)|
          Length = 918

 Score = 34.3 bits (77), Expect = 0.075
 Identities = 19/46 (41%), Positives = 25/46 (54%)
 Frame = -1

Query: 376 NKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 239
           N D   KNR G   +PY LL P++         G+T  G+PNS+SI
Sbjct: 880 NADHGRKNRCGAGVLPYELLAPSSPP-------GVTCRGVPNSISI 918



to top

>LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12)|
           (LOX2:Hv:3)
          Length = 896

 Score = 33.9 bits (76), Expect = 0.098
 Identities = 20/46 (43%), Positives = 25/46 (54%)
 Frame = -1

Query: 376 NKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 239
           N +P  KNR G   +PY LL P +         G+T  GIPNS+SI
Sbjct: 858 NNNPENKNRCGAGIVPYELLKPFSEP-------GVTGRGIPNSISI 896



to top

>ATF2_MOUSE (P16951) Cyclic AMP-dependent transcription factor ATF-2|
           (Activating transcription factor 2) (cAMP response
           element-binding protein CRE-BP1) (MXBP protein)
          Length = 487

 Score = 31.6 bits (70), Expect = 0.49
 Identities = 27/101 (26%), Positives = 41/101 (40%), Gaps = 10/101 (9%)
 Frame = +3

Query: 42  HCPHPINIIYDTIIIFHHPLIPGN*LPQPPRSQ*K------VTQ----YTLRDTNRSMTS 191
           H P  + ++    ++   P IPG   PQP +S+ K      +TQ     T  DT +   S
Sbjct: 223 HVPAAVPLVRPVTMVPSVPGIPGPSSPQPVQSEAKMRLKAALTQQHPPVTNGDTVKGHGS 282

Query: 192 GRTTTERRKQRPCSAQMETLLGMPMAVSPSAFSPLASDVLG 314
           G   T+  + RP S Q           SP+  +P   +  G
Sbjct: 283 GLVRTQSEESRPQSLQQPATSTTETPASPAHTTPQTQNTSG 323



to top

>ATF2_HUMAN (P15336) Cyclic AMP-dependent transcription factor ATF-2|
           (Activating transcription factor 2) (cAMP response
           element-binding protein CRE-BP1) (HB16)
          Length = 487

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 27/101 (26%), Positives = 40/101 (39%), Gaps = 10/101 (9%)
 Frame = +3

Query: 42  HCPHPINIIYDTIIIFHHPLIPGN*LPQPPRSQ*K------VTQ----YTLRDTNRSMTS 191
           H P  + ++    ++   P IPG   PQP +S+ K      +TQ     T  DT +   S
Sbjct: 223 HVPAAVPLVRPVTMVPSVPGIPGPSSPQPVQSEAKMRLKAALTQQHPPVTNGDTVKGHGS 282

Query: 192 GRTTTERRKQRPCSAQMETLLGMPMAVSPSAFSPLASDVLG 314
           G   T+  + RP S Q           SP+  +P      G
Sbjct: 283 GLVRTQSEESRPQSLQQPATSTTETPASPAHTTPQTQSTSG 323



to top

>ATF2_CHICK (O93602) Cyclic AMP-dependent transcription factor ATF-2|
           (Activating transcription factor 2)
          Length = 487

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 10/90 (11%)
 Frame = +3

Query: 42  HCPHPINIIYDTIIIFHHPLIPGN*LPQPPRSQ*KV----------TQYTLRDTNRSMTS 191
           H P  + ++    ++   P IPG   PQP +S+ K+           Q T  DT +   S
Sbjct: 223 HVPAAVPLVRPVTMVPSIPGIPGPSSPQPVQSEAKLRLKAALTQQHPQVTNGDTAKGHPS 282

Query: 192 GRTTTERRKQRPCSAQMETLLGMPMAVSPS 281
           G   T+  + RP S Q           SP+
Sbjct: 283 GLVRTQSEEPRPQSLQQPATSTTETPASPA 312



to top

>GATA6_HUMAN (Q92908) Transcription factor GATA-6 (GATA-binding factor 6)|
          Length = 449

 Score = 30.8 bits (68), Expect = 0.83
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
 Frame = +2

Query: 44  LSSPYQHHLRHNHHFPSSTNPW---QLITATTQKPMKSNTIH 160
           L+  Y HH  H+HH PS  +P+    L  A    P ++  +H
Sbjct: 173 LNGTYHHHHHHHHHHPSPYSPYVGAPLTPAWPAGPFETPVLH 214



to top

>LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13.11.12)|
          Length = 896

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 18/48 (37%), Positives = 25/48 (52%)
 Frame = -1

Query: 382 DMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 239
           + N +  LKNR G   + Y LL P +         G+T MG+P S+SI
Sbjct: 856 ERNVNITLKNRAGAGVVKYELLKPTSEH-------GVTGMGVPYSISI 896



to top

>ATF2_RAT (Q00969) Cyclic AMP-dependent transcription factor ATF-2|
           (Activating transcription factor 2) (cAMP response
           element-binding protein CRE-BP1)
          Length = 487

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 10/101 (9%)
 Frame = +3

Query: 42  HCPHPINIIYDTIIIFHHPLIPGN*LPQPPRSQ*K------VTQ----YTLRDTNRSMTS 191
           H P  + ++    ++   P IPG   PQP +S+ K      +TQ     T  DT +   S
Sbjct: 223 HVPAAVPLVRPVTMVPSVPGIPGPSSPQPVQSEAKMRLKAALTQQHPPVTNGDTVKGHGS 282

Query: 192 GRTTTERRKQRPCSAQMETLLGMPMAVSPSAFSPLASDVLG 314
           G    +  + RP S Q           SP+  +P   +  G
Sbjct: 283 GLVRAQSEESRPQSLQQPATSTTETPASPAHTTPQTQNTSG 323



to top

>HXA1_MOUSE (P09022) Homeobox protein Hox-A1 (Hox-1.6) (Homeotic protein|
           ERA-1-993) (Early retinoic acid 1) (Homeoboxless protein
           ERA-1-399)
          Length = 331

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +2

Query: 44  LSSPYQHHLRHNHHFPSS 97
           +SSP+ HH  H+HH P +
Sbjct: 56  ISSPHHHHHHHHHHHPQT 73



to top

>C18AA_PAEPP (Q45358) Parasporal crystal protein cry18Aa (Parasporal|
           delta-endotoxin CryXVIIIA(a)) (Crystaline parasporal
           protoxin) (79 kDa crystal protein)
          Length = 706

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +2

Query: 137 PMKSNTIHLARHEPIHDQRTDDYRKKETKTM 229
           P+ +NTI      PI+  RTD +RKK T+ +
Sbjct: 74  PIDNNTICSTDFTPINVMRTDPFRKKSTQEL 104



to top

>YF1M_CAEEL (Q21874) Hypothetical protein R09E10.5 precursor|
          Length = 1459

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +3

Query: 261  PMAVSPSAFSPLASDVLGYSSM*GIFT 341
            PM + P  FSP+ SDV G   M G+ T
Sbjct: 1431 PMTLEPRGFSPVPSDVRGSQGMLGLNT 1457



to top

>DDLA_SHIFL (P0A6K0) D-alanine--D-alanine ligase A (EC 6.3.2.4)|
           (D-alanylalanine synthetase A) (D-Ala-D-Ala ligase A)
          Length = 364

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = +3

Query: 147 VTQYTLRDTNRSMTSGRTTTERRKQRPCSAQMETLLGMPMAVSPS 281
           VT+  LRD   ++    T T   +     A++E+ LG+P+ V P+
Sbjct: 143 VTKRLLRDAGLNIAPFITLTRANRHNISFAEVESKLGLPLFVKPA 187



to top

>DDLA_ECOLI (P0A6J8) D-alanine--D-alanine ligase A (EC 6.3.2.4)|
           (D-alanylalanine synthetase A) (D-Ala-D-Ala ligase A)
          Length = 364

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = +3

Query: 147 VTQYTLRDTNRSMTSGRTTTERRKQRPCSAQMETLLGMPMAVSPS 281
           VT+  LRD   ++    T T   +     A++E+ LG+P+ V P+
Sbjct: 143 VTKRLLRDAGLNIAPFITLTRANRHNISFAEVESKLGLPLFVKPA 187



to top

>DDLA_ECOL6 (Q8FKE3) D-alanine--D-alanine ligase A (EC 6.3.2.4)|
           (D-alanylalanine synthetase A) (D-Ala-D-Ala ligase A)
          Length = 364

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = +3

Query: 147 VTQYTLRDTNRSMTSGRTTTERRKQRPCSAQMETLLGMPMAVSPS 281
           VT+  LRD   ++    T T   +     A++E+ LG+P+ V P+
Sbjct: 143 VTKRLLRDAGLNIAPFITLTRANRHNISFAEVESKLGLPLFVKPA 187



to top

>DDLA_ECO57 (P0A6J9) D-alanine--D-alanine ligase A (EC 6.3.2.4)|
           (D-alanylalanine synthetase A) (D-Ala-D-Ala ligase A)
          Length = 364

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = +3

Query: 147 VTQYTLRDTNRSMTSGRTTTERRKQRPCSAQMETLLGMPMAVSPS 281
           VT+  LRD   ++    T T   +     A++E+ LG+P+ V P+
Sbjct: 143 VTKRLLRDAGLNIAPFITLTRANRHNISFAEVESKLGLPLFVKPA 187



to top

>AHC1_YEAST (Q12433) Protein AHC1 (ADA HAT complex component 1)|
          Length = 566

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 8/44 (18%)
 Frame = +2

Query: 44  LSSPYQHHLRHNHHFPSS--------TNPWQLITATTQKPMKSN 151
           + SP Q  L+H HH P+S        TN +Q+ T  + + +++N
Sbjct: 1   MMSPAQDKLQHQHHNPNSSSSSSSKMTNVYQVTTPKSPQDLENN 44



to top

>HIPK4_RAT (Q4V793) Homeodomain-interacting protein kinase 4 (EC 2.7.11.1)|
          Length = 616

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 29  LIHASLSSPYQHHLRHNHHFPSSTNPWQL 115
           L+HA+  +   HH    +  P +TNPWQL
Sbjct: 238 LLHAARKA---HHFFKRNPHPDATNPWQL 263



to top

>YO25_CAEEL (P34675) Hypothetical protein ZK688.5|
          Length = 1620

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
 Frame = +3

Query: 96  PLIPGN*LPQPPRSQ*KVTQYTLRDTNRSMTSGRTTTERRKQRPCS--AQMETLLGMPMA 269
           P +P   LP P   Q            +  TS R TT R   +P +  A+ ETL   P+A
Sbjct: 628 PSVPVETLPPPGSDQ------------QPGTSRRFTTHRFNVQPDARGAETETLAPFPVA 675

Query: 270 VSPSAFSPLASDV 308
           + P+    +A ++
Sbjct: 676 IEPNELQRIAKNI 688



to top

>QIN_AVIS3 (P56260) Transforming protein Qin (Oncogene Qin)|
          Length = 387

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = +2

Query: 35  HASLSSPYQHHLRHNHHFPSSTNPWQLITATTQKPMKS 148
           H +   P+ HH  H+HH P    P +   A  +   K+
Sbjct: 38  HHNSHHPHHHHHHHHHHPPPPQQPQRAAAAEEEDEEKA 75



to top

>FOXGB_CHICK (Q90964) Forkhead box protein G1B (Forkhead-related protein FKHL1)|
           (Transcription factor BF-1) (Brain factor 1) (BF1)
           (CBF-1) (Proto-oncogene C-QIN) (N-62-5) (CEQ 3-1)
          Length = 451

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = +2

Query: 35  HASLSSPYQHHLRHNHHFPSSTNPWQLITATTQKPMKS 148
           H +   P+ HH  H+HH P    P +   A  +   K+
Sbjct: 38  HHNSHHPHHHHHHHHHHPPPPQQPQRAAAAEEEDEEKA 75



to top

>VGLM_EBV (P03215) Glycoprotein M|
          Length = 405

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = +3

Query: 117 LPQPPRSQ*KVTQYTLRDTNRSMTSGRTTTERRKQRPCSAQMETLLGMPM 266
           L   PR +   T    R+  RS TS  ++   R+QRP S Q      +PM
Sbjct: 346 LESEPRPRPSRTPSPGRNRRRSSTSSSSSRSTRRQRPVSTQALVSSVLPM 395



to top

>GDS1_YEAST (P41913) Protein GDS1|
          Length = 522

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 16/53 (30%), Positives = 24/53 (45%)
 Frame = +3

Query: 144 KVTQYTLRDTNRSMTSGRTTTERRKQRPCSAQMETLLGMPMAVSPSAFSPLAS 302
           K   Y   DTN SMT  + T   +  +   +Q  ++L  P   S ++ S  AS
Sbjct: 325 KKRNYMDEDTNESMTEPKKTKTTKPGKQTKSQSLSVLSTPKKGSSASLSTFAS 377



to top

>VNUA_PRVKA (P33485) Probable nuclear antigen|
          Length = 1733

 Score = 24.6 bits (52), Expect(2) = 8.0
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = +2

Query: 23  RVLIHASLSSPYQHHLRHNHHFPSSTNPWQLITATT 130
           R+ + ++ ++   HH +H+HH P   +     T TT
Sbjct: 10  RLSLPSTTTTRDHHHQQHHHHPPPPPSRTHFTTITT 45



 Score = 21.2 bits (43), Expect(2) = 8.0
 Identities = 11/41 (26%), Positives = 16/41 (39%)
 Frame = +1

Query: 106 LATNYRNHPEANEK*HNTPCETRTDP*PADGRLPKEGNKDH 228
           L  ++  HP    + H+ P   R    P D   P    +DH
Sbjct: 65  LFLSFPPHPPRPPQDHHRPTPARDHRDPRDHLPPTRTRRDH 105



to top

>SORL_CHICK (Q98930) Sortilin-related receptor (Sorting protein-related|
           receptor containing LDLR class A repeats) (SorLA)
           (SorLA-1) (Low-density lipoprotein receptor relative
           with 11 ligand-binding repeats) (LDLR relative with 11
           ligand-binding repeats) (
          Length = 1592

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
 Frame = +2

Query: 143 KSNTIHLARHEPIHD----QRTDDYRKKETKTMLSSDGD 247
           K NT+++ RHEP       + TD ++ +E K ++  D D
Sbjct: 167 KPNTVYIERHEPSGTSTVIRSTDFFQSRENKEVILEDVD 205



to top

>GLTL2_MOUSE (Q9D2N8) Polypeptide N-acetylgalactosaminyltransferase-like protein|
           2 (EC 2.4.1.41) (Protein-UDP
           acetylgalactosaminyltransferase-like protein 2)
           (UDP-GalNAc:polypeptide
           N-acetylgalactosaminyltransferase-like protein 2)
           (Polypeptide GalNAc tra
          Length = 638

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -1

Query: 217 FLLSVVVRPLVMDRF-VSRKVYCVTFHWLL 131
           F LS V +P   +R  + R++ C TFHW L
Sbjct: 459 FTLSKVAKPDCTERLKLQRRLGCRTFHWFL 488


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,104,928
Number of Sequences: 219361
Number of extensions: 885108
Number of successful extensions: 2881
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 2621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2816
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 1396778976
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top