ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl27f09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1O52B2_HUMAN (Q96RD2) Olfactory receptor 52B2 30 1.8
2ADD_HAEDU (Q7VNV1) Adenosine deaminase (EC 3.5.4.4) (Adenosine a... 30 1.8
3UGGG2_HUMAN (Q9NYU1) UDP-glucose:glycoprotein glucosyltransferas... 29 2.3
4KTNB1_ARATH (Q8H0T9) Katanin p80 WD40-containing subunit B1 homo... 29 2.3
5YDHE_SCHPO (Q92359) Hypothetical protein C6G9.14 in chromosome I 28 4.0
6WFDC9_RAT (Q6IE41) Protein WFDC9 precursor 28 5.2
7BMP7_MOUSE (P23359) Bone morphogenetic protein 7 precursor (BMP-... 28 6.8
8ABDA_DROME (P29555) Homeobox protein abdominal-A 28 6.8
9BMP7_HUMAN (P18075) Bone morphogenetic protein 7 precursor (BMP-... 28 6.8
10VGLC_HHV2G (P03173) Glycoprotein C precursor (Glycoprotein F) 27 8.8
11PCP_BACSU (P28618) Pyrrolidone-carboxylate peptidase (EC 3.4.19.... 27 8.8
12VGLC_HHV2H (Q89730) Glycoprotein C precursor 27 8.8
13VGLC_HHV23 (P06475) Glycoprotein C precursor 27 8.8

>O52B2_HUMAN (Q96RD2) Olfactory receptor 52B2|
          Length = 317

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +2

Query: 251 TAYSHICTIFLAGVPSFVSTLKHH 322
           T  SH+C I +  VPSF + L HH
Sbjct: 242 TCGSHLCVILMFYVPSFFTLLTHH 265



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>ADD_HAEDU (Q7VNV1) Adenosine deaminase (EC 3.5.4.4) (Adenosine|
           aminohydrolase)
          Length = 344

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = +3

Query: 51  ASKQAITLPSSQSFSKNIYVSHTQ-AKPLLLYIFCTRLPTTVVQCGQA 191
           A KQA+ LP+S + +   YVS  Q    L  Y+ C  LP +++Q  +A
Sbjct: 30  AKKQAVNLPASTAEALTAYVSVPQDCSDLNEYLRCFDLPLSLLQTPEA 77



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>UGGG2_HUMAN (Q9NYU1) UDP-glucose:glycoprotein glucosyltransferase 2 precursor (EC|
            2.4.1.-) (UDP-glucose ceramide glucosyltransferase-like
            1) (UDP--Glc:glycoprotein glucosyltransferase 2) (HUGT2)
          Length = 1516

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +1

Query: 325  FQVMISSLPMNWAGVDFFLDDESGER 402
            +QV I SLP +W   + + DDES +R
Sbjct: 1436 YQVAIKSLPQDWLWCETWCDDESKQR 1461



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>KTNB1_ARATH (Q8H0T9) Katanin p80 WD40-containing subunit B1 homolog 1|
          Length = 837

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = -2

Query: 310 SANKTWNSSKEDCTYVTVGSVGGARHKVSSVRISVSMLG 194
           S ++  + SKE  T+ + GS+ G  H+VSS  +S +  G
Sbjct: 399 SVSQNSDVSKESRTFSSTGSLPGTPHRVSSTNVSKATSG 437



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>YDHE_SCHPO (Q92359) Hypothetical protein C6G9.14 in chromosome I|
          Length = 681

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 17/55 (30%), Positives = 31/55 (56%)
 Frame = +2

Query: 167 YSSTVWTSTP*HRYTDAHRRNLVPSTSYTAYSHICTIFLAGVPSFVSTLKHHGSK 331
           YS  V++S    +Y+D   ++++ S S+  Y+    I L+ +PS   + K +GSK
Sbjct: 17  YSLPVFSS----QYSDIENKDVLKSNSWDPYAANAPIALSEIPSSSKSGKTNGSK 67



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>WFDC9_RAT (Q6IE41) Protein WFDC9 precursor|
          Length = 74

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 224 FCAHQCIYVRVCLSTLYYCSW*PC 153
           FC  +C  V+ C+S  Y C W  C
Sbjct: 43  FCGRRCTKVQKCVSPNYTCCWTYC 66



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>BMP7_MOUSE (P23359) Bone morphogenetic protein 7 precursor (BMP-7) (Osteogenic|
           protein 1) (OP-1)
          Length = 430

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = -3

Query: 405 STLARFIVKEEINARPIHRQRRNHNLEPWCFKVLTKLGTPARKIVHM 265
           S LA F +  E+++  IHR+ R+        ++L+ LG P R   H+
Sbjct: 26  SALADFSLDNEVHSSFIHRRLRSQERREMQREILSILGLPHRPRPHL 72



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>ABDA_DROME (P29555) Homeobox protein abdominal-A|
          Length = 590

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 11/42 (26%), Positives = 24/42 (57%)
 Frame = +1

Query: 46  FKQASKQLHYQAVNPFRKTYMYHTHKPNHYYYTYFAHGYQLQ 171
           F+Q   Q+  Q +N  ++ +++H  + +H+ Y+  +   QLQ
Sbjct: 121 FQQHHPQVQQQHLNHQQQQHLHHQQQQHHHQYSSLSAALQLQ 162



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>BMP7_HUMAN (P18075) Bone morphogenetic protein 7 precursor (BMP-7) (Osteogenic|
           protein 1) (OP-1) (Eptotermin alfa)
          Length = 431

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = -3

Query: 405 STLARFIVKEEINARPIHRQRRNHNLEPWCFKVLTKLGTPARKIVHM 265
           S LA F +  E+++  IHR+ R+        ++L+ LG P R   H+
Sbjct: 26  SALADFSLDNEVHSSFIHRRLRSQERREMQREILSILGLPHRPRPHL 72



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>VGLC_HHV2G (P03173) Glycoprotein C precursor (Glycoprotein F)|
          Length = 479

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +2

Query: 224 RNLVPSTSYTAYSHICTIFLAGVPSFVSTLKHHGS 328
           R+ +P  SY    +IC   LAG P  +  L+HHGS
Sbjct: 396 RSTLP-VSYEQTEYICR--LAGYPDGIPVLEHHGS 427



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>PCP_BACSU (P28618) Pyrrolidone-carboxylate peptidase (EC 3.4.19.3)|
           (5-oxoprolyl-peptidase) (Pyroglutamyl-peptidase I)
           (PGP-I) (Pyrase)
          Length = 215

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = +2

Query: 182 WTSTP*HRYTDAHRRNLVPST-SYTAYSHICTIFLAGVPSFVSTLKHH 322
           WT  P  R T   + + +P+  SYTA + +C     G+   +S    H
Sbjct: 114 WTRLPVKRMTAKMKEHGIPAAVSYTAGTFVCNYLFYGLMDHISRTSPH 161



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>VGLC_HHV2H (Q89730) Glycoprotein C precursor|
          Length = 480

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +2

Query: 224 RNLVPSTSYTAYSHICTIFLAGVPSFVSTLKHHGS 328
           R+ +P  SY    +IC   LAG P  +  L+HHGS
Sbjct: 397 RSTLP-VSYEQTEYICR--LAGYPDGIPVLEHHGS 428



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>VGLC_HHV23 (P06475) Glycoprotein C precursor|
          Length = 480

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +2

Query: 224 RNLVPSTSYTAYSHICTIFLAGVPSFVSTLKHHGS 328
           R+ +P  SY    +IC   LAG P  +  L+HHGS
Sbjct: 397 RSTLP-VSYEQTEYICR--LAGYPDGIPVLEHHGS 428


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,769,789
Number of Sequences: 219361
Number of extensions: 1001615
Number of successful extensions: 2822
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2822
length of database: 80,573,946
effective HSP length: 112
effective length of database: 56,005,514
effective search space used: 1344132336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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