ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl27f09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_483360.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3586 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 57 aagcaagcaattacattaccaagcagtc 84 |||||||| ||||||||||||||||||| Sbjct: 3571 aagcaagcgattacattaccaagcagtc 3544 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 194 ccctaacatagatacactgatgc 216 ||||||||||||||||||||||| Sbjct: 3451 ccctaacatagatacactgatgc 3429
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 57 aagcaagcaattacattaccaagcagtc 84 |||||||| ||||||||||||||||||| Sbjct: 25837163 aagcaagcgattacattaccaagcagtc 25837136 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 194 ccctaacatagatacactgatgc 216 ||||||||||||||||||||||| Sbjct: 25837043 ccctaacatagatacactgatgc 25837021
>dbj|AP005509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1003_A09 Length = 150755 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 57 aagcaagcaattacattaccaagcagtc 84 |||||||| ||||||||||||||||||| Sbjct: 22950 aagcaagcgattacattaccaagcagtc 22923 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 194 ccctaacatagatacactgatgc 216 ||||||||||||||||||||||| Sbjct: 22830 ccctaacatagatacactgatgc 22808
>dbj|AP004622.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0689E12 Length = 147516 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 57 aagcaagcaattacattaccaagcagtc 84 |||||||| ||||||||||||||||||| Sbjct: 109374 aagcaagcgattacattaccaagcagtc 109347 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 194 ccctaacatagatacactgatgc 216 ||||||||||||||||||||||| Sbjct: 109254 ccctaacatagatacactgatgc 109232
>dbj|AK121539.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033031I02, full insert sequence Length = 3828 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 57 aagcaagcaattacattaccaagcagtc 84 |||||||| ||||||||||||||||||| Sbjct: 3697 aagcaagcgattacattaccaagcagtc 3670 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 194 ccctaacatagatacactgatgc 216 ||||||||||||||||||||||| Sbjct: 3577 ccctaacatagatacactgatgc 3555
>dbj|AK064999.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001E01, full insert sequence Length = 3586 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 57 aagcaagcaattacattaccaagcagtc 84 |||||||| ||||||||||||||||||| Sbjct: 3571 aagcaagcgattacattaccaagcagtc 3544 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 194 ccctaacatagatacactgatgc 216 ||||||||||||||||||||||| Sbjct: 3451 ccctaacatagatacactgatgc 3429
>gb|AC116136.9| Mus musculus chromosome 5, clone RP23-116G17, complete sequence Length = 212184 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 96 aaaaacatatatgtatcacacacaca 121 ||||| |||||||||||||||||||| Sbjct: 65060 aaaaatatatatgtatcacacacaca 65035
>gb|AY365046.1| Pan troglodytes BRCA1 (BRCA1) gene, complete cds Length = 80966 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 96 aaaaacatatatgtatcacacacaca 121 ||||| |||||||||||||||||||| Sbjct: 13695 aaaaatatatatgtatcacacacaca 13670
>gb|AY589042.1| Gorilla gorilla breast cancer type 1 (BRCA1) gene, complete cds Length = 81346 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 96 aaaaacatatatgtatcacacacaca 121 ||||| |||||||||||||||||||| Sbjct: 14030 aaaaatatatatgtatcacacacaca 14005
>gb|AY589040.1| Pongo pygmaeus breast cancer type 1 (BRCA1) gene, complete cds Length = 83366 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 96 aaaaacatatatgtatcacacacaca 121 ||||| |||||||||||||||||||| Sbjct: 15194 aaaaatatatatgtatcacacacaca 15169
>emb|AL929305.4| Zebrafish DNA sequence from clone DKEY-110K5, complete sequence Length = 166110 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 taagcaagcaagcaagcaatta 69 |||||||||||||||||||||| Sbjct: 38896 taagcaagcaagcaagcaatta 38917
>ref|XM_950467.1| Encephalitozoon cuniculi GB-M1 hypothetical protein (ECU09_0080) partial mRNA Length = 417 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 25 gttttattacataactggaga 45 ||||||||||||||||||||| Sbjct: 60 gttttattacataactggaga 80
>gb|AC116502.11| Mus musculus chromosome 13, clone RP24-300G17, complete sequence Length = 170654 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 101 catatatgtatcacacacaca 121 ||||||||||||||||||||| Sbjct: 79158 catatatgtatcacacacaca 79178
>gb|AC131190.3| Mus musculus BAC clone RP24-332E15 from chromosome 5, complete sequence Length = 176925 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 tttaagcaagcaagcaagcaa 66 ||||||||||||||||||||| Sbjct: 151898 tttaagcaagcaagcaagcaa 151878
>gb|AC132293.3| Mus musculus BAC clone RP24-322H1 from chromosome 1, complete sequence Length = 158294 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 49 aagcaagcaagcaagcaattacatt 73 ||||||||||||||||||| ||||| Sbjct: 30589 aagcaagcaagcaagcaatcacatt 30565
>gb|AC125537.4| Mus musculus BAC clone RP24-165M1 from chromosome 12, complete sequence Length = 167744 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 aagcaagcaagcaagcaatta 69 ||||||||||||||||||||| Sbjct: 78417 aagcaagcaagcaagcaatta 78437
>gb|AC117623.7| Mus musculus chromosome 1, clone RP23-114L12, complete sequence Length = 211821 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 49 aagcaagcaagcaagcaattacatt 73 ||||||||||||||||||| ||||| Sbjct: 122756 aagcaagcaagcaagcaatcacatt 122732
>emb|AL627433.3| Human DNA sequence from clone RP11-331L19 on chromosome 13, complete sequence Length = 35052 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 acatatatgtatcacacacac 120 ||||||||||||||||||||| Sbjct: 23570 acatatatgtatcacacacac 23590
>emb|AL591047.6| Human DNA sequence from clone RP13-467P9 on chromosome 6, complete sequence Length = 54456 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 tttaagcaagcaagcaagcaa 66 ||||||||||||||||||||| Sbjct: 27728 tttaagcaagcaagcaagcaa 27708
>gb|AC129886.3| Atelerix albiventris clone LB4-234A16, complete sequence Length = 176448 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 tttaagcaagcaagcaagcaa 66 ||||||||||||||||||||| Sbjct: 141254 tttaagcaagcaagcaagcaa 141234
>emb|BX883052.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 11/11 Length = 349381 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 100 acatatatgtatcacacacac 120 ||||||||||||||||||||| Sbjct: 208014 acatatatgtatcacacacac 207994
>emb|BX663528.10| Zebrafish DNA sequence from clone DKEYP-47F9 in linkage group 17, complete sequence Length = 193986 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 aagcaagcaagcaagcaatta 69 ||||||||||||||||||||| Sbjct: 156585 aagcaagcaagcaagcaatta 156565
>emb|AL606522.6| Mouse DNA sequence from clone RP23-19L22 on chromosome 11 Contains the Actr2 gene for ARP2 actin-related protein 2 homolog (yeast), a small nuclear ribonucleoprotein polypeptide G (Snrpg) pseudogene, two novel genes, the Rab1 gene for RAB1, member RAS oncogene family and three CpG islands, complete sequence Length = 203071 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 tttaagcaagcaagcaagcaa 66 ||||||||||||||||||||| Sbjct: 43018 tttaagcaagcaagcaagcaa 43038
>gb|AC110004.2| Homo sapiens chromosome 5 clone RP11-265I24, complete sequence Length = 117879 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 tttaagcaagcaagcaagcaa 66 ||||||||||||||||||||| Sbjct: 90371 tttaagcaagcaagcaagcaa 90351
>gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold Length = 2136267 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 tttaagcaagcaagcaagcaa 66 ||||||||||||||||||||| Sbjct: 750526 tttaagcaagcaagcaagcaa 750506
>gb|AC008685.8| Homo sapiens chromosome 5 clone CTB-59H21, complete sequence Length = 159713 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 tttaagcaagcaagcaagcaa 66 ||||||||||||||||||||| Sbjct: 15596 tttaagcaagcaagcaagcaa 15576
>gb|AC154450.3| Mus musculus BAC clone RP24-169J2 from chromosome 12, complete sequence Length = 168477 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 tttaagcaagcaagcaagcaa 66 ||||||||||||||||||||| Sbjct: 36537 tttaagcaagcaagcaagcaa 36517
>gb|AC013509.5|AC013509 Homo sapiens chromosome , clone RP11-115I9, complete sequence Length = 151544 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 aagcaagcaagcaattacatt 73 ||||||||||||||||||||| Sbjct: 12565 aagcaagcaagcaattacatt 12545
>gb|DQ008837.1| Podocarpus macrophyllus large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3014 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 tttaagcaagcaagcaagcaa 66 ||||||||||||||||||||| Sbjct: 1533 tttaagcaagcaagcaagcaa 1513
>emb|BX465859.13| Zebrafish DNA sequence from clone DKEYP-67G10 in linkage group 4, complete sequence Length = 214205 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 aagcaagcaagcaagcaatta 69 ||||||||||||||||||||| Sbjct: 27757 aagcaagcaagcaagcaatta 27737
>gb|AC010132.5|AC010132 Homo sapiens BAC clone RP11-111K18 from 7p11.2-p2, complete sequence Length = 166680 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 acatatatgtatcacacacac 120 ||||||||||||||||||||| Sbjct: 136292 acatatatgtatcacacacac 136312
>gb|AC011716.7|AC011716 Homo sapiens chromosome 8 clone RP11-65D13, complete sequence Length = 172327 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 aagcaagcaagcaattacatt 73 ||||||||||||||||||||| Sbjct: 21268 aagcaagcaagcaattacatt 21288
>emb|BX005472.11| Zebrafish DNA sequence from clone CH211-119C22 in linkage group 11, complete sequence Length = 158170 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 aagcaagcaagcaagcaatta 69 ||||||||||||||||||||| Sbjct: 32360 aagcaagcaagcaagcaatta 32380
>emb|BX005468.9| Mouse DNA sequence from clone RP23-142E21 on chromosome X, complete sequence Length = 217179 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 aagcaagcaagcaagcaatta 69 ||||||||||||||||||||| Sbjct: 188220 aagcaagcaagcaagcaatta 188240
>emb|AL954171.10| Zebrafish DNA sequence from clone CH211-284B7 in linkage group 2, complete sequence Length = 148854 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 48 taagcaagcaagcaagcaattacat 72 ||||||||||||||||||| ||||| Sbjct: 21107 taagcaagcaagcaagcaaatacat 21083
>gb|AC124395.5| Mus musculus BAC clone RP24-342J3 from 13, complete sequence Length = 147971 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 tttaagcaagcaagcaagcaa 66 ||||||||||||||||||||| Sbjct: 114039 tttaagcaagcaagcaagcaa 114019
>emb|BX248111.7| Zebrafish DNA sequence from clone DKEY-22L11 in linkage group 4, complete sequence Length = 185023 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 aagcaagcaagcaagcaatta 69 ||||||||||||||||||||| Sbjct: 71954 aagcaagcaagcaagcaatta 71974
>emb|AL590451.2|CNS07EGI chromosome IX of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 251002 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 25 gttttattacataactggaga 45 ||||||||||||||||||||| Sbjct: 9579 gttttattacataactggaga 9599
>gb|AF034897.1|AF034897 Rattus norvegicus olfactory receptor-like protein (SCR D-8) gene, complete cds Length = 1325 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 101 catatatgtatcacacacaca 121 ||||||||||||||||||||| Sbjct: 71 catatatgtatcacacacaca 91
>gb|AC132618.3| Mus musculus BAC clone RP23-238K12 from 6, complete sequence Length = 155828 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 aagcaagcaagcaagcaatta 69 ||||||||||||||||||||| Sbjct: 76226 aagcaagcaagcaagcaatta 76206
>gb|AC147634.3| Mus musculus BAC clone RP23-305G22 from 10, complete sequence Length = 207157 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 aagcaagcaagcaagcaatta 69 ||||||||||||||||||||| Sbjct: 104688 aagcaagcaagcaagcaatta 104708
>emb|CT030646.6| Mouse DNA sequence from clone RP23-222A16 on chromosome 13, complete sequence Length = 195169 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 aagcaagcaagcaagcaatta 69 ||||||||||||||||||||| Sbjct: 167991 aagcaagcaagcaagcaatta 168011
>gb|AC171197.1| Mus musculus BAC clone RP23-216J7 from chromosome 5, complete sequence Length = 211677 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 tttaagcaagcaagcaagcaa 66 ||||||||||||||||||||| Sbjct: 64922 tttaagcaagcaagcaagcaa 64902
>gb|AC110252.25| Mus musculus chromosome 6, clone RP23-267G12, complete sequence Length = 172806 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 ttaagcaagcaagcaagcaa 66 |||||||||||||||||||| Sbjct: 130052 ttaagcaagcaagcaagcaa 130033
>gb|AC109272.20| Mus musculus chromosome 7, clone RP23-354L18, complete sequence Length = 202993 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 taagcaagcaagcaagcaat 67 |||||||||||||||||||| Sbjct: 18959 taagcaagcaagcaagcaat 18978
>gb|AC108399.11| Mus musculus chromosome 19, clone RP24-375O7, complete sequence Length = 180312 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 aagcaagcaagcaagcaatt 68 |||||||||||||||||||| Sbjct: 39693 aagcaagcaagcaagcaatt 39712
>gb|AC137978.8| Mus musculus chromosome 1, clone RP24-468M12, complete sequence Length = 181633 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 tatatgtatcacacacacaa 122 |||||||||||||||||||| Sbjct: 160764 tatatgtatcacacacacaa 160783
>gb|AC148991.2| Mus musculus BAC clone RP23-52N2 from chromosome 19, complete sequence Length = 221043 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 ttaagcaagcaagcaagcaa 66 |||||||||||||||||||| Sbjct: 215875 ttaagcaagcaagcaagcaa 215894
>gb|AC131725.2| Mus musculus BAC clone RP23-129H16 from chromosome 5, complete sequence Length = 203437 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 ttaagcaagcaagcaagcaa 66 |||||||||||||||||||| Sbjct: 78810 ttaagcaagcaagcaagcaa 78829
>gb|AC158619.12| Mus musculus 10 BAC RP23-291O3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 250421 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 acatatgtacaatcttcctt 283 |||||||||||||||||||| Sbjct: 193923 acatatgtacaatcttcctt 193904
>gb|AC147380.2| Mus musculus BAC clone RP24-119J10 from chromosome 17, complete sequence Length = 156475 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 ttaagcaagcaagcaagcaa 66 |||||||||||||||||||| Sbjct: 69434 ttaagcaagcaagcaagcaa 69415
>gb|AC140927.2| Mus musculus BAC clone RP23-409D19 from chromosome 5, complete sequence Length = 209257 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 ttaagcaagcaagcaagcaa 66 |||||||||||||||||||| Sbjct: 134968 ttaagcaagcaagcaagcaa 134987
>gb|AC127551.7| Mus musculus BAC clone RP24-547H23 from chromosome 8, complete sequence Length = 204342 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 ttaagcaagcaagcaagcaa 66 |||||||||||||||||||| Sbjct: 76214 ttaagcaagcaagcaagcaa 76195
>gb|AC161595.3| Mus musculus BAC clone RP23-471H21 from chromosome 9, complete sequence Length = 189223 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 ttaagcaagcaagcaagcaa 66 |||||||||||||||||||| Sbjct: 136781 ttaagcaagcaagcaagcaa 136762
>gb|AC163498.3| Mus musculus chromosome 1, clone RP23-86J11, complete sequence Length = 192061 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 34 cataactggagatttaagcaagca 57 ||||||||||||||||| |||||| Sbjct: 148234 cataactggagatttaaacaagca 148211
>gb|AC158138.13| Mus musculus chromosome 7, clone RP23-26C21, complete sequence Length = 232699 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 ttaagcaagcaagcaagcaa 66 |||||||||||||||||||| Sbjct: 149961 ttaagcaagcaagcaagcaa 149942
>gb|AC132284.5| Mus musculus BAC clone RP24-351O18 from chromosome 5, complete sequence Length = 174681 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 atatatgtatcacacacaca 121 |||||||||||||||||||| Sbjct: 45562 atatatgtatcacacacaca 45581
>gb|AC157218.13| Mus musculus 6 BAC RP24-200A9 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 173704 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 ttaagcaagcaagcaagcaa 66 |||||||||||||||||||| Sbjct: 82733 ttaagcaagcaagcaagcaa 82714
>gb|AC124374.5| Mus musculus BAC clone RP24-567K8 from chromosome 5, complete sequence Length = 181395 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 ttaagcaagcaagcaagcaa 66 |||||||||||||||||||| Sbjct: 108437 ttaagcaagcaagcaagcaa 108418
>gb|AC103894.3| Papio anubis clone RP41-312D4, complete sequence Length = 124063 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 acatatatgtatcacacaca 119 |||||||||||||||||||| Sbjct: 3954 acatatatgtatcacacaca 3935
>gb|AC141481.4| Mus musculus BAC clone RP23-145E16 from chromosome 15, complete sequence Length = 195197 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 taagcaagcaagcaagcaat 67 |||||||||||||||||||| Sbjct: 26061 taagcaagcaagcaagcaat 26080
>gb|AC132402.3| Mus musculus BAC clone RP23-404I24 from chromosome 19, complete sequence Length = 217490 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 ttaagcaagcaagcaagcaa 66 |||||||||||||||||||| Sbjct: 102729 ttaagcaagcaagcaagcaa 102748
>gb|AC117662.13| Mus musculus chromosome 16, clone RP23-351D19, complete sequence Length = 293822 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 aagcaagcaagcaagcaatt 68 |||||||||||||||||||| Sbjct: 270615 aagcaagcaagcaagcaatt 270596
>gb|AC110524.11| Mus musculus chromosome 9, clone RP23-403L22, complete sequence Length = 225122 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 aagcaagcaagcaagcaatt 68 |||||||||||||||||||| Sbjct: 161615 aagcaagcaagcaagcaatt 161596
>gb|AC125375.3| Mus musculus BAC clone RP23-464K21 from chromosome 14, complete sequence Length = 198193 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 atatatgtatcacacacaca 121 |||||||||||||||||||| Sbjct: 187443 atatatgtatcacacacaca 187462
>gb|AC129212.4| Mus musculus BAC clone RP24-373G21 from chromosome 15, complete sequence Length = 174846 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 taagcaagcaagcaagcaat 67 |||||||||||||||||||| Sbjct: 142657 taagcaagcaagcaagcaat 142676
>gb|AC140053.4| Mus musculus BAC clone RP23-258J2 from chromosome 19, complete sequence Length = 186595 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 ttaagcaagcaagcaagcaa 66 |||||||||||||||||||| Sbjct: 89556 ttaagcaagcaagcaagcaa 89537
>emb|CR774185.17| Zebrafish DNA sequence from clone CH211-237H18 in linkage group 13, complete sequence Length = 154017 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 atatatgtatcacacacaca 121 |||||||||||||||||||| Sbjct: 73972 atatatgtatcacacacaca 73953
>gb|AE014303.1| Homo sapiens chromosome 13q34 schizophrenia region contig 2 section 3 of 3 of the complete sequence Length = 209806 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 atatatgtatcacacacaca 121 |||||||||||||||||||| Sbjct: 28981 atatatgtatcacacacaca 29000
>gb|AC122274.4| Mus musculus BAC clone RP23-228J3 from 14, complete sequence Length = 192135 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 atatatgtatcacacacaca 121 |||||||||||||||||||| Sbjct: 51714 atatatgtatcacacacaca 51695
>gb|AC112144.4| Mus musculus BAC clone RP23-32B4 from 19, complete sequence Length = 216521 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 ttaagcaagcaagcaagcaa 66 |||||||||||||||||||| Sbjct: 208747 ttaagcaagcaagcaagcaa 208766
>gb|AC121768.2| Mus musculus BAC clone RP23-339H16 from 15, complete sequence Length = 199607 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 ttaagcaagcaagcaagcaa 66 |||||||||||||||||||| Sbjct: 152852 ttaagcaagcaagcaagcaa 152833
>gb|AC116138.21| Mus musculus chromosome 10, clone RP23-123D17, complete sequence Length = 219004 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 98 aaacatatatgtatcacacacaca 121 |||||||||||||||| ||||||| Sbjct: 162564 aaacatatatgtatcatacacaca 162587
>gb|AC117574.7| Mus musculus chromosome 5, clone RP23-32E20, complete sequence Length = 255008 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 acatatatgtatcacacaca 119 |||||||||||||||||||| Sbjct: 153361 acatatatgtatcacacaca 153380
>gb|AC105325.11| Mus musculus chromosome 1, clone RP24-455G23, complete sequence Length = 139801 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 ttaagcaagcaagcaagcaa 66 |||||||||||||||||||| Sbjct: 62186 ttaagcaagcaagcaagcaa 62205
>emb|Z97989.1|HS66H14 Human DNA sequence from clone RP1-66H14 on chromosome 6q21-22 Contains the 3' end of the FYN gene for the FYN oncogene related to SRC, FGR, YES and the 5' end of the C6orf5 gene for chromosome 6 open reading frame 5 (NFkB-activating protein ACT1, connection to IKK and SAPK/JNK, chromosome 6 open reading frame 6) (C6orf5)(ACT1, CIKS, C6ORF6, DKFZP586G0522)(contains FLJ22949), complete sequence Length = 155937 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 aagcaagcaagcaagcaatt 68 |||||||||||||||||||| Sbjct: 154381 aagcaagcaagcaagcaatt 154400
>emb|AL590385.23| Human DNA sequence from clone RP11-5K23 on chromosome 1 Contains the FCGR2A gene for Fc fragment of IgG low affinity IIa receptor for (CD32), the HSPA6 gene for heat shock 70kDa protein 6 (HSP70B'), a ribosomal protein S23 (RPS23) pseudogene, the FCGR3A gene for Fc fragment of IgG low affinity IIIa receptor for (CD16), a novel gene and three CpG islands, complete sequence Length = 129505 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 aagcaagcaagcaagcaatt 68 |||||||||||||||||||| Sbjct: 113332 aagcaagcaagcaagcaatt 113351
>emb|AL359541.11| Human DNA sequence from clone RP11-474I16 on chromosome 1 Contains three novel genes, the FCGR2B gene for Fc fragment of IgG low affinity IIb receptor for (CD32), a ribosomal protein L31 (RPL31) pseudogene, the gene for Fc receptor homolog expressed in B cells (FREB), the gene for a novel protein (FLJ31052), the DUSP12 gene for dual specificity phosphatase 12, the 5' end of the ATF6 gene for activating transcription factor 6 and a CpG island, complete sequence Length = 158641 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 aagcaagcaagcaagcaatt 68 |||||||||||||||||||| Sbjct: 154104 aagcaagcaagcaagcaatt 154085
>emb|AL160153.11| Human DNA sequence from clone RP11-397O8 on chromosome 13 Contains the 3' end of the ITGBL1 gene for integrin, beta-like 1 (with EGF-like repeat domains), a novel gene, the 3' end of the FGF14 gene for fibroblast growth factor 14 and a high-mobility group box 1 (HMGB1) pseudogene, complete sequence Length = 147607 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 atatatgtatcacacacaca 121 |||||||||||||||||||| Sbjct: 80416 atatatgtatcacacacaca 80435
>emb|AL109916.17|HSDJ139A3 Human DNA sequence from clone RP1-139A3 on chromosome 6q21-22.1 Contains part of the FYN gene for the FYN oncogene related to SRC, FGR, YES, complete sequence Length = 49183 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 aagcaagcaagcaagcaatt 68 |||||||||||||||||||| Sbjct: 444 aagcaagcaagcaagcaatt 463
>gb|AC157794.3| Mus musculus chromosome 1, clone RP24-111L14, complete sequence Length = 157029 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 tatatgtatcacacacacaa 122 |||||||||||||||||||| Sbjct: 29441 tatatgtatcacacacacaa 29422
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ggcgggcgttgatttcttcc 379 |||||||||||||||||||| Sbjct: 2111213 ggcgggcgttgatttcttcc 2111232
>gb|AC102274.20| Mus musculus chromosome 3, clone RP24-286L19, complete sequence Length = 183113 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 atatatgtatcacacacaca 121 |||||||||||||||||||| Sbjct: 29634 atatatgtatcacacacaca 29653
>gb|AC131386.2| Homo sapiens chromosome 5 clone CTD-3179P9, complete sequence Length = 169076 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 atatatgtatcacacacaca 121 |||||||||||||||||||| Sbjct: 51217 atatatgtatcacacacaca 51198
>emb|AL662955.3|OSJN00158 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019J05, complete sequence Length = 185211 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 39 ctggagatttaagcaagcaagcaagcaa 66 ||||||| | |||||||||||||||||| Sbjct: 135131 ctggagaatcaagcaagcaagcaagcaa 135158
>emb|AL451067.12| Human DNA sequence from clone RP11-25K21 on chromosome 1, complete sequence Length = 150019 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 aagcaagcaagcaagcaatt 68 |||||||||||||||||||| Sbjct: 102723 aagcaagcaagcaagcaatt 102742 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 aagcaagcaagcaagcaatt 68 |||||||||||||||||||| Sbjct: 21375 aagcaagcaagcaagcaatt 21394
>emb|AL672225.15| Mouse DNA sequence from clone RP23-384G1 on chromosome 11 Contains the 5' end of the Spnb2 gene for spectrin beta 2 and a CpG island, complete sequence Length = 172823 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 ttaagcaagcaagcaagcaa 66 |||||||||||||||||||| Sbjct: 141903 ttaagcaagcaagcaagcaa 141922
>emb|AL662902.14| Mouse DNA sequence from clone RP23-417K16 on chromosome 11 Contains two novel genes, complete sequence Length = 154002 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 ttaagcaagcaagcaagcaa 66 |||||||||||||||||||| Sbjct: 58926 ttaagcaagcaagcaagcaa 58945
>emb|AL669903.16| Mouse DNA sequence from clone RP23-72A14 on chromosome 11 Contains a CpG island, complete sequence Length = 208028 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 atatatgtatcacacacaca 121 |||||||||||||||||||| Sbjct: 68466 atatatgtatcacacacaca 68485
>gb|AC164970.2| Mus musculus BAC clone RP24-222P1 from chromosome 16, complete sequence Length = 202577 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 aagcaagcaagcaagcaatt 68 |||||||||||||||||||| Sbjct: 18057 aagcaagcaagcaagcaatt 18076
>gb|AC161570.6| Mus musculus chromosome 5, clone RP23-36O9, complete sequence Length = 228402 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 ttaagcaagcaagcaagcaa 66 |||||||||||||||||||| Sbjct: 23238 ttaagcaagcaagcaagcaa 23257
>gb|AC104850.2| Homo sapiens chromosome 3 clone RP11-241K18, complete sequence Length = 173580 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 aagcaagcaagcaagcaatt 68 |||||||||||||||||||| Sbjct: 115623 aagcaagcaagcaagcaatt 115604
>gb|AC161592.2| Mus musculus BAC clone RP24-252H17 from chromosome 13, complete sequence Length = 186026 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 aagcaagcaagcaagcaatt 68 |||||||||||||||||||| Sbjct: 143168 aagcaagcaagcaagcaatt 143149
>emb|BX679668.12| Mouse DNA sequence from clone RP23-83P7 on chromosome X, complete sequence Length = 121586 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 aagcaagcaagcaagcaatt 68 |||||||||||||||||||| Sbjct: 51213 aagcaagcaagcaagcaatt 51232
>gb|AC158900.4| Mus musculus chromosome 5, clone RP23-168G15, complete sequence Length = 211621 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 ttaagcaagcaagcaagcaa 66 |||||||||||||||||||| Sbjct: 155610 ttaagcaagcaagcaagcaa 155591
>gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0018F16, complete sequence Length = 179157 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 taagcaagcaagcaagcaat 67 |||||||||||||||||||| Sbjct: 72032 taagcaagcaagcaagcaat 72051
>gb|AC114977.2| Homo sapiens chromosome 5 clone RP11-49C20, complete sequence Length = 180697 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 atatatgtatcacacacaca 121 |||||||||||||||||||| Sbjct: 72310 atatatgtatcacacacaca 72291
>gb|AC026118.17| Homo sapiens 3 BAC RP11-67F24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 176108 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 aagcaagcaagcaagcaatt 68 |||||||||||||||||||| Sbjct: 61863 aagcaagcaagcaagcaatt 61844
>gb|AC103834.2| Homo sapiens chromosome 8, clone RP11-1081K18, complete sequence Length = 173817 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 aagcaagcaagcaagcaatt 68 |||||||||||||||||||| Sbjct: 51244 aagcaagcaagcaagcaatt 51225
>gb|AC099332.2| Homo sapiens chromosome 3 clone RP11-256B12, complete sequence Length = 164268 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 aagcaagcaagcaagcaatt 68 |||||||||||||||||||| Sbjct: 133263 aagcaagcaagcaagcaatt 133282
>gb|AC010370.5| Homo sapiens chromosome 3 clone CTD-2049J23, complete sequence Length = 157079 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 aagcaagcaagcaagcaatt 68 |||||||||||||||||||| Sbjct: 125147 aagcaagcaagcaagcaatt 125128
>gb|AC159477.9| Mus musculus 10 BAC RP23-95I8 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 222553 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 acatatgtacaatcttcctt 283 |||||||||||||||||||| Sbjct: 201691 acatatgtacaatcttcctt 201710
>gb|AC018574.6| Homo sapiens chromosome , clone RP11-4G2, complete sequence Length = 171858 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 aagcaagcaagcaagcaatt 68 |||||||||||||||||||| Sbjct: 58453 aagcaagcaagcaagcaatt 58434
>gb|AC116380.14| Mus musculus chromosome 1, clone RP23-6F21, complete sequence Length = 232429 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 ttaagcaagcaagcaagcaa 66 |||||||||||||||||||| Sbjct: 27680 ttaagcaagcaagcaagcaa 27699
>gb|AC160945.5| Mus musculus 10 BAC RP24-187J13 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 168109 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 atatatgtatcacacacaca 121 |||||||||||||||||||| Sbjct: 3076 atatatgtatcacacacaca 3095
>gb|AC155827.10| Mus musculus 10 BAC RP24-408N5 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 149754 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 ttaagcaagcaagcaagcaa 66 |||||||||||||||||||| Sbjct: 75471 ttaagcaagcaagcaagcaa 75490
>dbj|AK021040.1| Mus musculus adult male corpus striatum cDNA, RIKEN full-length enriched library, clone:C030003B10 product:unclassifiable, full insert sequence Length = 710 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 ttaagcaagcaagcaagcaa 66 |||||||||||||||||||| Sbjct: 482 ttaagcaagcaagcaagcaa 463
>gb|AC022211.5|AC022211 Homo sapiens BAC clone RP11-649A18 from 17, complete sequence Length = 191155 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 aagcaagcaagcaagcaatt 68 |||||||||||||||||||| Sbjct: 24333 aagcaagcaagcaagcaatt 24314
>gb|AC153557.8| Mus musculus 10 BAC RP23-203H20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 233640 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 tccaagttttgttagcactt 311 |||||||||||||||||||| Sbjct: 95530 tccaagttttgttagcactt 95511
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 39 ctggagatttaagcaagcaagcaagcaa 66 ||||||| | |||||||||||||||||| Sbjct: 12310247 ctggagaatcaagcaagcaagcaagcaa 12310274
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 taagcaagcaagcaagcaat 67 |||||||||||||||||||| Sbjct: 16193143 taagcaagcaagcaagcaat 16193162
>gb|AC073436.62| Mus musculus strain C57BL/6J chromosome 2 clone rp23-50k8, complete sequence Length = 203901 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 39 ctggagatttaagcaagcaagcaagcaa 66 |||||| || |||||||||||||||||| Sbjct: 181362 ctggagtttaaagcaagcaagcaagcaa 181335
>gb|AY016370.1| Homo sapiens hnRNPA1 pseudogene, complete sequence; and CC chemokine receptor 8 (CCR8) and CX3C chemokine receptor 1 (CX3CR1) genes, complete cds Length = 86172 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 aagcaagcaagcaagcaatt 68 |||||||||||||||||||| Sbjct: 19887 aagcaagcaagcaagcaatt 19906
>gb|AC159746.5| Mus musculus 6 BAC RP23-437F11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 171039 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 acatatatgtatcacacaca 119 |||||||||||||||||||| Sbjct: 67799 acatatatgtatcacacaca 67780
>gb|AC157519.2| Mus musculus BAC clone RP23-202O17 from chromosome 19, complete sequence Length = 215073 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 ttaagcaagcaagcaagcaa 66 |||||||||||||||||||| Sbjct: 153797 ttaagcaagcaagcaagcaa 153778
>gb|AC149055.6| Mus musculus BAC clone RP23-358K1 from chromosome 7, complete sequence Length = 215193 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 aagcaagcaagcaagcaatt 68 |||||||||||||||||||| Sbjct: 43627 aagcaagcaagcaagcaatt 43646
>gb|AC131772.4| Mus musculus BAC clone RP24-300K9 from chromosome 5, complete sequence Length = 161015 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 aagcaagcaagcaagcaatt 68 |||||||||||||||||||| Sbjct: 53059 aagcaagcaagcaagcaatt 53078
>gb|AC093509.3| Homo sapiens chromosome 16 clone CTD-2337L2, complete sequence Length = 120592 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 aagcaagcaagcaagcaatt 68 |||||||||||||||||||| Sbjct: 33000 aagcaagcaagcaagcaatt 32981
>gb|AF257711.1|AF257711 Mus musculus proton-dependent high affinity oligopeptide transporter (Pept2) gene, complete cds Length = 44259 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 aagcaagcaagcaagcaatt 68 |||||||||||||||||||| Sbjct: 4048 aagcaagcaagcaagcaatt 4067
>gb|AC103893.2| Papio anubis clone RP41-216H1, complete sequence Length = 155255 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 acatatatgtatcacacaca 119 |||||||||||||||||||| Sbjct: 146936 acatatatgtatcacacaca 146917
>gb|AC093424.3| Homo sapiens chromosome 1 clone RP11-467C18, complete sequence Length = 153854 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 atatatgtatcacacacaca 121 |||||||||||||||||||| Sbjct: 36170 atatatgtatcacacacaca 36189
>gb|AC154232.1| Mus musculus BAC clone RP24-340J3 from chromosome 16, complete sequence Length = 141529 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 aagcaagcaagcaagcaatt 68 |||||||||||||||||||| Sbjct: 49562 aagcaagcaagcaagcaatt 49543
>gb|AC114313.2| Homo sapiens chromosome 5 clone RP11-30D9, complete sequence Length = 109840 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 atatatgtatcacacacaca 121 |||||||||||||||||||| Sbjct: 30992 atatatgtatcacacacaca 30973
>gb|AC153994.8| Mus musculus 6 BAC RP24-178H18 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 179333 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 aagcaagcaagcaagcaatt 68 |||||||||||||||||||| Sbjct: 72027 aagcaagcaagcaagcaatt 72046
>emb|AL928950.8| Mouse DNA sequence from clone RP23-70E1 on chromosome 2, complete sequence Length = 157063 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 aagcaagcaagcaagcaatt 68 |||||||||||||||||||| Sbjct: 10591 aagcaagcaagcaagcaatt 10610
>dbj|BS000124.1| Pan troglodytes chromosome 22 clone:PTB-069P04, map 22, complete sequences Length = 84339 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 atatatgtatcacacacaca 121 |||||||||||||||||||| Sbjct: 65693 atatatgtatcacacacaca 65674
>dbj|BS000050.1| Pan troglodytes chromosome 22 clone:RP43-038C12, map 22, complete sequences Length = 202014 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 agcaagcaagcaagcaatta 69 |||||||||||||||||||| Sbjct: 85698 agcaagcaagcaagcaatta 85717
>gb|AC002528.1|AC002528 Human BAC clone GS1-542D18 from 7q31-q32, complete sequence Length = 141120 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 43 agatttaagcaagcaagcaagcaa 66 ||||||||| |||||||||||||| Sbjct: 41074 agatttaagtaagcaagcaagcaa 41051
>gb|AF506935.1| Bos taurus clone BMS5033 microsatellite sequence Length = 227 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 atatatgtatcacacacaca 121 |||||||||||||||||||| Sbjct: 155 atatatgtatcacacacaca 174
>gb|AC122122.14| Mus musculus chromosome 1, clone RP23-15D21, complete sequence Length = 204416 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 ttaagcaagcaagcaagcaa 66 |||||||||||||||||||| Sbjct: 181368 ttaagcaagcaagcaagcaa 181387
>emb|BX927074.16| Zebrafish DNA sequence from clone DKEY-7L12 in linkage group 18, complete sequence Length = 152517 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 48 taagcaagcaagcaagcaattaca 71 ||||||||||||||||||| |||| Sbjct: 142823 taagcaagcaagcaagcaactaca 142800
>gb|AC144461.33| Mus musculus strain C57BL/6J clone rp23-427m23, complete sequence Length = 164848 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 ttaagcaagcaagcaagcaa 66 |||||||||||||||||||| Sbjct: 81212 ttaagcaagcaagcaagcaa 81193
>gb|AC123994.11| Mus musculus chromosome 5, clone RP24-360P14, complete sequence Length = 148929 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 ttaagcaagcaagcaagcaa 66 |||||||||||||||||||| Sbjct: 87215 ttaagcaagcaagcaagcaa 87196
>gb|AC153825.7| Mus musculus 10 BAC RP23-70B19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 279677 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 atatatgtatcacacacaca 121 |||||||||||||||||||| Sbjct: 74075 atatatgtatcacacacaca 74056
>emb|CT025735.16| Mouse DNA sequence from clone RP24-338F19 on chromosome 12, complete sequence Length = 165439 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 ttaagcaagcaagcaagcaa 66 |||||||||||||||||||| Sbjct: 89321 ttaagcaagcaagcaagcaa 89302
>dbj|AP001729.1| Homo sapiens genomic DNA, chromosome 21q, section 73/105 Length = 340000 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 atatatgtatcacacacaca 121 |||||||||||||||||||| Sbjct: 284184 atatatgtatcacacacaca 284165
>gb|AY102585.1| Fusarium pseudograminearum strain NRRL 28338 trichothecene gene cluster, partial sequence Length = 18891 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 aagcaagcaagcaagcaatt 68 |||||||||||||||||||| Sbjct: 10665 aagcaagcaagcaagcaatt 10646
>gb|AY102583.1| Fusarium pseudograminearum strain NRRL 28334 trichothecene gene cluster, partial sequence Length = 18875 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 aagcaagcaagcaagcaatt 68 |||||||||||||||||||| Sbjct: 10653 aagcaagcaagcaagcaatt 10634
>gb|AY102582.1| Fusarium pseudograminearum strain NRRL 28065 trichothecene gene cluster, partial sequence Length = 18894 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 aagcaagcaagcaagcaatt 68 |||||||||||||||||||| Sbjct: 10669 aagcaagcaagcaagcaatt 10650
>gb|AY102580.1| Fusarium pseudograminearum strain 28062 trichothecene gene cluster, partial sequence Length = 18872 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 aagcaagcaagcaagcaatt 68 |||||||||||||||||||| Sbjct: 10647 aagcaagcaagcaagcaatt 10628
>gb|AC162300.3| Mus musculus chromosome 3, clone RP23-224F23, complete sequence Length = 162774 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 atatatgtatcacacacaca 121 |||||||||||||||||||| Sbjct: 73104 atatatgtatcacacacaca 73085
>emb|BX004889.8| Zebrafish DNA sequence from clone DKEY-65P15 in linkage group 25, complete sequence Length = 253422 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 43 agatttaagcaagcaagcaagcaa 66 |||| ||||||||||||||||||| Sbjct: 228801 agatataagcaagcaagcaagcaa 228778
>gb|AC122343.4| Mus musculus BAC clone RP23-359L18 from chromosome 7, complete sequence Length = 228892 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 ttaagcaagcaagcaagcaa 66 |||||||||||||||||||| Sbjct: 226150 ttaagcaagcaagcaagcaa 226131
>gb|AC165951.3| Mus musculus BAC clone RP24-137B13 from chromosome 17, complete sequence Length = 209191 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 98 aaacatatatgtatcacacacaca 121 ||||||||||| |||||||||||| Sbjct: 156217 aaacatatatgcatcacacacaca 156194
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 taagcaagcaagcaagcaat 67 |||||||||||||||||||| Sbjct: 16201384 taagcaagcaagcaagcaat 16201403
>gb|AC154700.2| Mus musculus BAC clone RP24-344E15 from chromosome 16, complete sequence Length = 199878 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 aagcaagcaagcaagcaatt 68 |||||||||||||||||||| Sbjct: 155265 aagcaagcaagcaagcaatt 155284
>gb|AC135360.3| Mus musculus BAC clone RP24-396P4 from 10, complete sequence Length = 154276 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 ttaagcaagcaagcaagcaa 66 |||||||||||||||||||| Sbjct: 148443 ttaagcaagcaagcaagcaa 148424
>gb|AC140264.2| Mus musculus BAC clone RP23-316F10 from 10, complete sequence Length = 176292 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 ttaagcaagcaagcaagcaa 66 |||||||||||||||||||| Sbjct: 160074 ttaagcaagcaagcaagcaa 160093
>gb|AC130712.4| Mus musculus BAC clone RP23-125B4 from 1, complete sequence Length = 186518 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 acatatatgtatcacacacacaag 123 |||||||| ||||||||||||||| Sbjct: 66902 acatatatatatcacacacacaag 66879
>emb|CT025575.12| Mouse DNA sequence from clone RP23-272A7 on chromosome 9, complete sequence Length = 232192 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 aagcaagcaagcaagcaatt 68 |||||||||||||||||||| Sbjct: 29971 aagcaagcaagcaagcaatt 29990
>gb|AC173340.1| Mus musculus BAC clone RP24-257F22 from chromosome 9, complete sequence Length = 195116 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 aagcaagcaagcaagcaatt 68 |||||||||||||||||||| Sbjct: 29246 aagcaagcaagcaagcaatt 29227
>dbj|AB066010.1| Chordaria flagelliformis DNA, 26S rRNA, IGS, 5S rRNA, partial and complete sequence, strain:Isle. of Man_E Length = 720 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 aagcaagcaagcaagcaatt 68 |||||||||||||||||||| Sbjct: 691 aagcaagcaagcaagcaatt 672
>emb|AL805904.12| Mouse DNA sequence from clone RP23-47B18 on chromosome 4, complete sequence Length = 132319 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 ttaagcaagcaagcaagcaa 66 |||||||||||||||||||| Sbjct: 90329 ttaagcaagcaagcaagcaa 90310
>emb|AL732615.15| Mouse DNA sequence from clone RP23-190O8 on chromosome 4, complete sequence Length = 189819 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 tttaagcaagcaagcaagca 65 |||||||||||||||||||| Sbjct: 76966 tttaagcaagcaagcaagca 76947
>emb|AL928574.7| Mouse DNA sequence from clone RP23-332L19 on chromosome 4, complete sequence Length = 114436 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 ttaagcaagcaagcaagcaa 66 |||||||||||||||||||| Sbjct: 61744 ttaagcaagcaagcaagcaa 61763
>gb|AC158169.2| Mus musculus BAC clone RP23-210A16 from chromosome 5, complete sequence Length = 223006 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 aagcaagcaagcaagcaatt 68 |||||||||||||||||||| Sbjct: 212292 aagcaagcaagcaagcaatt 212311
>gb|AC166166.2| Mus musculus BAC clone RP23-293B18 from chromosome 17, complete sequence Length = 177378 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 98 aaacatatatgtatcacacacaca 121 ||||||||||| |||||||||||| Sbjct: 468 aaacatatatgcatcacacacaca 445
>emb|AL671229.11| Mouse DNA sequence from clone RP23-93N10 on chromosome 4, complete sequence Length = 237082 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 aagcaagcaagcaagcaatt 68 |||||||||||||||||||| Sbjct: 74946 aagcaagcaagcaagcaatt 74927
>emb|AL844547.9| Mouse DNA sequence from clone RP23-216B20 on chromosome 2, complete sequence Length = 210589 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 ttaagcaagcaagcaagcaa 66 |||||||||||||||||||| Sbjct: 19066 ttaagcaagcaagcaagcaa 19047
>emb|AL772265.5| Mouse DNA sequence from clone RP23-2D7 on chromosome 2, complete sequence Length = 212009 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 39 ctggagatttaagcaagcaagcaagcaa 66 |||||| || |||||||||||||||||| Sbjct: 61391 ctggagtttaaagcaagcaagcaagcaa 61364
>gb|AC166834.2| Mus musculus BAC clone RP23-158D24 from chromosome 7, complete sequence Length = 212016 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 ttaagcaagcaagcaagcaa 66 |||||||||||||||||||| Sbjct: 85086 ttaagcaagcaagcaagcaa 85105
>emb|AJ421481.1| Bos taurus X-inactivation center region, Jpx and Xist genes Length = 233345 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 ttaagcaagcaagcaagcaa 66 |||||||||||||||||||| Sbjct: 62360 ttaagcaagcaagcaagcaa 62341
>gb|AC108908.16| Mus musculus chromosome 7, clone RP23-179K7, complete sequence Length = 220289 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 taagcaagcaagcaagcaat 67 |||||||||||||||||||| Sbjct: 135004 taagcaagcaagcaagcaat 135023
>emb|AL732608.8| Mouse DNA sequence from clone RP23-243C9 on chromosome 4, complete sequence Length = 126615 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 ttaagcaagcaagcaagcaa 66 |||||||||||||||||||| Sbjct: 103138 ttaagcaagcaagcaagcaa 103119
>gb|AC087276.13| Homo sapiens chromosome 11, clone RP11-484D2, complete sequence Length = 204109 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 aaacatatatgtatcacaca 117 |||||||||||||||||||| Sbjct: 173401 aaacatatatgtatcacaca 173382
>dbj|AP000156.1| Homo sapiens genomic DNA, chromosome 21q22.2, DSCR region, clone D47-S479, segment 8/16, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 atatatgtatcacacacaca 121 |||||||||||||||||||| Sbjct: 92601 atatatgtatcacacacaca 92582
>dbj|AP000014.2| Homo sapiens genomic DNA of 21q22.2 Down Syndrome region, segment 7/13 Length = 302521 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 atatatgtatcacacacaca 121 |||||||||||||||||||| Sbjct: 129518 atatatgtatcacacacaca 129499
>dbj|AP001430.1| Homo sapiens genomic DNA, chromosome 21q22.2, clone:T1435, LB7T-ERG region, complete sequence Length = 40307 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 atatatgtatcacacacaca 121 |||||||||||||||||||| Sbjct: 27366 atatatgtatcacacacaca 27347
>dbj|AP005139.2| Homo sapiens genomic DNA, chromosome 18p clone:RP11-93H10, complete sequences Length = 165500 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 aagcaagcaagcaagcaatt 68 |||||||||||||||||||| Sbjct: 117723 aagcaagcaagcaagcaatt 117742 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,329,933 Number of Sequences: 3902068 Number of extensions: 4329933 Number of successful extensions: 115382 Number of sequences better than 10.0: 169 Number of HSP's better than 10.0 without gapping: 169 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 114399 Number of HSP's gapped (non-prelim): 795 length of query: 410 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 388 effective length of database: 17,147,199,772 effective search space: 6653113511536 effective search space used: 6653113511536 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
