Clone Name | rbastl27f03 |
---|---|
Clone Library Name | barley_pub |
>CCNB2_ORYLU (Q9DG96) G2/mitotic-specific cyclin-B2| Length = 386 Score = 30.0 bits (66), Expect = 1.4 Identities = 16/39 (41%), Positives = 22/39 (56%) Frame = -2 Query: 325 TQLVAPLMIVKLS*SAPVSFGSCSLEQGLCSMLFHVCVA 209 T+LVAP++ + SAPVS C E+ LC V +A Sbjct: 67 TELVAPMIQTGAAASAPVSAKPCVKEEQLCQAFSEVLLA 105
>CCNB2_ORYCU (Q9DGA3) G2/mitotic-specific cyclin-B2| Length = 388 Score = 29.3 bits (64), Expect = 2.4 Identities = 16/38 (42%), Positives = 21/38 (55%) Frame = -2 Query: 322 QLVAPLMIVKLS*SAPVSFGSCSLEQGLCSMLFHVCVA 209 QLVAP++ + SAPVS C E+ LC V +A Sbjct: 70 QLVAPMIQTGAAASAPVSAKPCVKEEQLCQAFSEVLLA 107
>SO1C1_RAT (Q9EPZ7) Solute carrier organic anion transporter family member 1C1| (Solute carrier family 21 member 14) (Blood-brain barrier-specific anion transporter 1) (BBB-specific anion transporter type 1) Length = 716 Score = 28.9 bits (63), Expect = 3.2 Identities = 14/46 (30%), Positives = 20/46 (43%) Frame = -1 Query: 341 TAPQRHPAGCTFDDCETLLKCSCFVWFLLLRTRFVQYAFSCVCG*Q 204 T P + F DC + KCS W + + YA +C+ G Q Sbjct: 466 TKPVSYHERALFSDCNSRCKCSDSKWEPMCGDNGITYASACLAGCQ 511
>ETXA_STAAW (P0A0L1) Enterotoxin type A precursor (SEA)| Length = 257 Score = 28.9 bits (63), Expect = 3.2 Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 7/63 (11%) Frame = +3 Query: 33 SLPLETIQSN--ITPVQDLHLNARNHKIEK---EHSCSFNSKMLVGVLV--RIAEPSNTY 191 ++PLET+++N VQ+L L AR + EK +S F+ K+ G++V EPS Y Sbjct: 161 TVPLETVKTNKKNVTVQELDLQARRYLQEKYNLYNSDVFDGKVQRGLIVFHTSTEPSVNY 220 Query: 192 KKF 200 F Sbjct: 221 DLF 223
>ETXA_STAAU (P0A0L2) Enterotoxin type A precursor (SEA)| Length = 257 Score = 28.9 bits (63), Expect = 3.2 Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 7/63 (11%) Frame = +3 Query: 33 SLPLETIQSN--ITPVQDLHLNARNHKIEK---EHSCSFNSKMLVGVLV--RIAEPSNTY 191 ++PLET+++N VQ+L L AR + EK +S F+ K+ G++V EPS Y Sbjct: 161 TVPLETVKTNKKNVTVQELDLQARRYLQEKYNLYNSDVFDGKVQRGLIVFHTSTEPSVNY 220 Query: 192 KKF 200 F Sbjct: 221 DLF 223
>ZN225_HUMAN (Q9UK10) Zinc finger protein 225| Length = 706 Score = 28.5 bits (62), Expect = 4.1 Identities = 19/78 (24%), Positives = 30/78 (38%) Frame = +3 Query: 45 ETIQSNITPVQDLHLNARNHKIEKEHSCSFNSKMLVGVLVRIAEPSNTYKKFDLLATHT* 224 E T LH + R H EK + C K + ++ L Sbjct: 599 EECGKRFTENSQLHSHQRVHTGEKPYKCEKCGKSFRWASTHLTHQRLHSREKLLQCEDCG 658 Query: 225 KSILHKPCSKEQEPNETG 278 KSI+H C K+Q+ +++G Sbjct: 659 KSIVHSSCLKDQQRDQSG 676
>AKA11_RAT (Q62924) A-kinase anchor protein 11 (Protein kinase A-anchoring| protein 11) (PRKA11) (A-kinase anchor protein 220 kDa) (AKAP 220) Length = 1129 Score = 28.5 bits (62), Expect = 4.1 Identities = 15/40 (37%), Positives = 20/40 (50%) Frame = +3 Query: 69 PVQDLHLNARNHKIEKEHSCSFNSKMLVGVLVRIAEPSNT 188 P Q L A +H E +CSF S M GV+ + +NT Sbjct: 499 PSQRSMLPALSHSDESIQTCSFASDMAAGVIAEAEKVANT 538
>ALG12_SCHPO (Q9USD4) Probable| dolichyl-P-Man:Man(7)GlcNAc(2)-PP-dolichyl-alpha-1, 6-mannosyltransferase (EC 2.4.1.-) (Mannosyltransferase ALG12 homolog) Length = 546 Score = 27.7 bits (60), Expect = 7.0 Identities = 15/41 (36%), Positives = 23/41 (56%) Frame = -2 Query: 169 ILTRTPTSILLLNEHECSFSILWFLAFRCKSWTGVILLCIV 47 I T S+LL N + S SIL F A +S ++L+C++ Sbjct: 146 IATNHSLSLLLKNNYYGSISILVFAAAIVRSEIALLLMCLI 186
>SO1C1_MOUSE (Q9ERB5) Solute carrier organic anion transporter family member 1C1| (Solute carrier family 21 member 14) (Organic anion transporter F) (OATP-F) (Organic anion-transporting polypeptide 14) (Organic anion transporter 2) (OATP2) Length = 715 Score = 27.3 bits (59), Expect = 9.2 Identities = 13/46 (28%), Positives = 19/46 (41%) Frame = -1 Query: 341 TAPQRHPAGCTFDDCETLLKCSCFVWFLLLRTRFVQYAFSCVCG*Q 204 T P + F DC + KCS W + + Y +C+ G Q Sbjct: 465 TKPVSYHERALFSDCNSRCKCSDSKWEPMCGDNGITYVSACLAGCQ 510
>CCNB_DICDI (P42524) G2/mitotic-specific cyclin-B| Length = 436 Score = 27.3 bits (59), Expect = 9.2 Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 7/101 (6%) Frame = +3 Query: 24 QLMSLPLETIQ-SNITPVQDLHLNARNHKIEKEHSCSFN------SKMLVGVLVRIAEPS 182 Q + +T+Q SN + N RN+ I + S N S ++ GVL P Sbjct: 62 QTTGMATKTVQLSNNNIIMPQPTNTRNNIITRSKSIIDNGASLRNSALISGVLPNANGPV 121 Query: 183 NTYKKFDLLATHT*KSILHKPCSKEQEPNETGAL*ESFTII 305 N +K D+ + +I +P + N+T + E +I Sbjct: 122 NKVQKRDIQSMEMMNNIPQQPVMIDDVDNDTNMIQEEQMVI 162
>CLPX_AQUAE (O67356) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 412 Score = 27.3 bits (59), Expect = 9.2 Identities = 15/29 (51%), Positives = 18/29 (62%) Frame = +3 Query: 105 KIEKEHSCSFNSKMLVGVLVRIAEPSNTY 191 K+ KE CSF K VL+ IA P+NTY Sbjct: 4 KVNKEF-CSFCGKRQDEVLILIAGPNNTY 31 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,995,548 Number of Sequences: 219361 Number of extensions: 1070640 Number of successful extensions: 2274 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 2226 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2274 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 1402043640 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)