>EDG3_MOUSE (Q9Z0U9) Sphingosine 1-phosphate receptor Edg-3 (S1P receptor|
           Edg-3) (Endothelial differentiation G-protein coupled
           receptor 3) (Sphingosine 1-phosphate receptor 3) (S1P3)
           (Lysophospholipid receptor B3)
          Length = 378

 Score = 30.8 bits (68), Expect = 0.92
 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
 Frame = -2

Query: 288 PRTWAREWAMLPPPIMAPTCSERRRWMERHAKDVVSRPCSLNHGSCV---VGCCWLFSFS 118
           P  W      +   + A TCS     +ERH   +  RP   N    V   +G CWL +FS
Sbjct: 109 PTVWFLREGSMFVALGASTCSLLAIAIERHLTMIKMRPYDANKKHRVFLLIGMCWLIAFS 168

Query: 117 V 115
           +
Sbjct: 169 L 169

>RFNG_HUMAN (Q9Y644) Beta-1,3-N-acetylglucosaminyltransferase radical fringe|
           (EC 2.4.1.222) (O-fucosylpeptide
           3-beta-N-acetylglucosaminyltransferase)
          Length = 331

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 16/50 (32%), Positives = 21/50 (42%)
 Frame = +1

Query: 46  KTTPLRSTTPALIPSPTVLTTSTNRKRKQPATTNNTRPMIERARPRYYIF 195
           +  P R   P+L P    +   T RK   P      R  I RAR + +IF
Sbjct: 44  RAPPSRPAAPSLRPDDVFIAVKTTRKNHGPRLRLLLRTWISRARQQTFIF 93

>TT1_ARATH (Q8VWG3) TRANSPARENT TESTA 1 protein (Zinc finger protein TT1)|
           (TTL1)
          Length = 303

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 9/60 (15%)
 Frame = +1

Query: 124 RKQPATTNNTRPMIERARPRYY-IFGMSFH-------PPSSFRTCRGHYRRRQ-HRPFPC 276
           RK P +   T+P      P Y  + G   H       P   FRT + HY+R+  H+PF C
Sbjct: 172 RKGPESLKGTQPRAMLGIPCYCCVEGCRNHIDHPRSKPLKDFRTLQTHYKRKHGHKPFSC 231

>EDG3_HUMAN (Q99500) Sphingosine 1-phosphate receptor Edg-3 (S1P receptor|
           Edg-3) (Endothelial differentiation G-protein coupled
           receptor 3) (Sphingosine 1-phosphate receptor 3) (S1P3)
          Length = 378

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
 Frame = -2

Query: 288 PRTWAREWAMLPPPIMAPTCSERRRWMERHAKDVVSRPCSLNHGSCV---VGCCWLFSFS 118
           P  W      +   + A TCS     +ERH   +  RP   N    V   +G CWL +F+
Sbjct: 108 PTVWFLREGSMFVALGASTCSLLAIAIERHLTMIKMRPYDANKRHRVFLLIGMCWLIAFT 167

Query: 117 V 115
           +
Sbjct: 168 L 168

>KI18A_HUMAN (Q8NI77) Kinesin family member 18A|
          Length = 898

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 11/27 (40%), Positives = 20/27 (74%)
 Frame = +1

Query: 73  PALIPSPTVLTTSTNRKRKQPATTNNT 153
           P+++PS   +TT+  RKRK  ++T+N+
Sbjct: 814 PSMVPSYMAMTTAAKRKRKLTSSTSNS 840

>DAN4_YEAST (P47179) Cell wall protein DAN4 precursor|
          Length = 1161

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +1

Query: 49  TTPLRSTTPALIPSPTVLTTSTNRKRKQPATTNNT 153
           TT   STTP    +PT  TTST  +    +TT  T
Sbjct: 217 TTSTTSTTPTTSTTPTTSTTSTTSQTSTKSTTPTT 251



 Score = 28.5 bits (62), Expect = 4.5
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +1

Query: 49  TTPLRSTTPALIPSPTVLTTSTNRKRKQPATTNNT 153
           TT   STTP    +PT  TTST       +TT+ T
Sbjct: 250 TTSSTSTTPTTSTTPTTSTTSTAPTTSTTSTTSTT 284

>LSP2_DROME (Q24388) Larval serum protein 2 precursor (LSP-2) (Hexamerin 2)|
          Length = 701

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 16/60 (26%), Positives = 23/60 (38%)
 Frame = +1

Query: 91  PTVLTTSTNRKRKQPATTNNTRPMIERARPRYYIFGMSFHPPSSFRTCRGHYRRRQHRPF 270
           P  LTT         +   N  P +E +    Y FG + H   S    +   +R  H+PF
Sbjct: 448 PESLTTYFEHFDSDISNAVNVEPAVEGSADPLYTFGRNSHYKGSSYVIKARQQRLNHKPF 507

>IL21R_HUMAN (Q9HBE5) Interleukin-21 receptor precursor (IL-21R) (Novel|
           interleukin receptor)
          Length = 538

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 8/18 (44%), Positives = 15/18 (83%)
 Frame = -2

Query: 288 PRTWAREWAMLPPPIMAP 235
           PR++ R+W ++PPP+ +P
Sbjct: 516 PRSYLRQWVVIPPPLSSP 533

>POLN_EEVV3 (P36327) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
           [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC
           2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1);
           Protease/triphosphatase/NTPase/helicase nsP2 (EC
           3.4.22.-) (EC 3.1.3.33) (EC
          Length = 2485

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = -2

Query: 216 RWMERHAKDVVS-RPCSLNHGSCVVGCCWLF 127
           RW + + +D    RP  L     V+GCCW F
Sbjct: 393 RWAKEYKEDQEDERPLGLRDRQLVMGCCWAF 423

>VGLC_HHV1K (P28986) Glycoprotein C precursor|
          Length = 511

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 14/38 (36%), Positives = 15/38 (39%)
 Frame = +1

Query: 46  KTTPLRSTTPALIPSPTVLTTSTNRKRKQPATTNNTRP 159
           KTTP    +P   P PT    S       P   NNT P
Sbjct: 75  KTTPTEPASPPTTPKPTSTPKSPPTSTPDPKPKNNTTP 112

>VGLC_HHV11 (P10228) Glycoprotein C precursor|
          Length = 511

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 14/38 (36%), Positives = 15/38 (39%)
 Frame = +1

Query: 46  KTTPLRSTTPALIPSPTVLTTSTNRKRKQPATTNNTRP 159
           KTTP    +P   P PT    S       P   NNT P
Sbjct: 75  KTTPTEPASPPTTPKPTSTPKSPPTSTPDPKPKNNTTP 112

>POLN_EEVVC (Q8V294) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
           [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC
           2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1);
           Protease/triphosphatase/NTPase/helicase nsP2 (EC
           3.4.22.-) (EC 3.1.3.33) (EC
          Length = 2496

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = -2

Query: 216 RWMERHAKDVVS-RPCSLNHGSCVVGCCWLF 127
           RW + + +D    RP  L     V+GCCW F
Sbjct: 393 RWAKEYKEDQEDERPLGLRDRQLVMGCCWAF 423

>POLN_EEVVT (P27282) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
           [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC
           2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1);
           Protease/triphosphatase/NTPase/helicase nsP2 (EC
           3.4.22.-) (EC 3.1.3.33) (EC
          Length = 2492

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = -2

Query: 216 RWMERHAKDVVS-RPCSLNHGSCVVGCCWLF 127
           RW + + +D    RP  L     V+GCCW F
Sbjct: 393 RWAKEYKEDQEDERPLGLRDRQLVMGCCWAF 423

>POLN_EEVVP (P36328) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
           [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC
           2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1);
           Protease/triphosphatase/NTPase/helicase nsP2 (EC
           3.4.22.-) (EC 3.1.3.33) (EC
          Length = 2492

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = -2

Query: 216 RWMERHAKDVVS-RPCSLNHGSCVVGCCWLF 127
           RW + + +D    RP  L     V+GCCW F
Sbjct: 393 RWAKEYKEDQEDERPLGLRDRQLVMGCCWAF 423

>FA53B_HUMAN (Q14153) Protein FAM53B|
          Length = 422

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +1

Query: 55  PLRSTTPALIPSPTVLTTSTNRKRKQPATTNNTRPMIERARP 180
           P  ++TPA  P     ++  +R R QP   N+ +  ++R RP
Sbjct: 244 PSANSTPASTPELARRSSGLSRSRSQPCVLNDKKVGVKRRRP 285

>GLMS_SYNEL (Q8DJI6) Glucosamine--fructose-6-phosphate aminotransferase|
           [isomerizing] (EC 2.6.1.16) (Hexosephosphate
           aminotransferase) (D-fructose-6-phosphate
           amidotransferase) (GFAT)
           (L-glutamine-D-fructose-6-phosphate amidotransferase)
           (Glucosamine-6-ph
          Length = 625

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 19/82 (23%)
 Frame = +1

Query: 64  STTPALIP----------------SPT---VLTTSTNRKRKQPATTNNTRPMIERARPRY 186
           S TPA+IP                +PT   V     +R RK P T N    M+E+   ++
Sbjct: 195 SDTPAIIPYTRAVLPLENGELARLTPTGVEVYDFEGHRLRKTPRTLNWNPVMVEKQGFKH 254

Query: 187 YIFGMSFHPPSSFRTCRGHYRR 252
           Y+    +  P   R C  +Y R
Sbjct: 255 YMLKEIYEQPGVVRACLENYLR 276

>POLN_EEVVM (Q9WJC7) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
           [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC
           2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1);
           Protease/triphosphatase/NTPase/helicase nsP2 (EC
           3.4.22.-) (EC 3.1.3.33) (EC
          Length = 2498

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = -2

Query: 216 RWMERHAKDVVS-RPCSLNHGSCVVGCCWLF 127
           RW + + +D    RP  L     V+GCCW F
Sbjct: 393 RWAKEYKEDQEDERPLGLRDRQLVMGCCWAF 423

>MAP4_HUMAN (P27816) Microtubule-associated protein 4 (MAP 4)|
          Length = 1152

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
 Frame = +1

Query: 22   AYLI*SRYKTTPLRS---TTPALIPSPTVLTTSTNRKRKQPATTNNTRPMIERARPR 183
            A ++ SR K TP+ S   TTP +   PT    S+   R     TN + P ++  R +
Sbjct: 882  AGVVPSRVKATPMPSRPSTTPFIDKKPTSAKPSSTTPRLSRLATNTSAPDLKNVRSK 938

>ZN646_HUMAN (O15015) Zinc finger protein 646|
          Length = 1829

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 17/72 (23%), Positives = 35/72 (48%)
 Frame = +1

Query: 73  PALIPSPTVLTTSTNRKRKQPATTNNTRPMIERARPRYYIFGMSFHPPSSFRTCRGHYRR 252
           P++ P+P +L  +T+++ + P TT + RP       +    G ++    S    R  +R 
Sbjct: 436 PSVPPAPLLLAETTHKEEEDPTTTLDHRPY------KCSECGRAYRHRGSLVNHRHSHRT 489

Query: 253 RQHRPFPCPRPW 288
            +++   CPR +
Sbjct: 490 GEYQCSLCPRKY 501

>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)|
          Length = 5179

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +1

Query: 49   TTPLRSTTPALIPSPTVLTTSTNRKRKQPATTNNT 153
            TTP  +TTP+  P PT +TT +      P TT  T
Sbjct: 1713 TTPSSTTTPS--PPPTTMTTPSPTTTPSPPTTTMT 1745

>MUC1_XENLA (Q05049) Integumentary mucin C.1 (FIM-C.1) (Fragment)|
          Length = 662

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +1

Query: 49  TTPLRSTTPALIPSPTVLTTSTNRKRKQPATTN 147
           TTP  +TT A   +PT  TT+T   +    TT+
Sbjct: 491 TTPTTTTTKATTTTPTTTTTTTTTTKATTTTTS 523

>GP1BA_HUMAN (P07359) Platelet glycoprotein Ib alpha chain precursor|
           (Glycoprotein Ibalpha) (GP-Ib alpha) (GPIbA)
           (GPIb-alpha) (Antigen CD42b-alpha) (CD42b antigen)
           [Contains: Glycocalicin]
          Length = 626

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 19/77 (24%), Positives = 33/77 (42%)
 Frame = +1

Query: 49  TTPLRSTTPALIPSPTVLTTSTNRKRKQPATTNNTRPMIERARPRYYIFGMSFHPPSSFR 228
           TTP  +  P +  SPT+L ++T+    +      T+P+      +  I  +   PP    
Sbjct: 422 TTPEPTPIPTIATSPTILVSATSLITPKSTFLTTTKPVSLLESTKKTIPELD-QPPKLRG 480

Query: 229 TCRGHYRRRQHRPFPCP 279
             +GH    ++ PF  P
Sbjct: 481 VLQGHLESSRNDPFLHP 497

>PE55_LUCCU (Q95UE8) Peritrophin-55 precursor|
          Length = 220

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +1

Query: 46  KTTPLRSTTPALIPSPTVLTTSTNRKRKQPATTNNTRP 159
           KTTP+ +T P   P P+ + T+    +  P T   T+P
Sbjct: 124 KTTPIVTTAPPSTPVPSTIVTN----KPDPTTPKTTKP 157

>POLN_EEEVF (Q4QXJ8) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
           [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC
           2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1);
           Protease/triphosphatase/NTPase/helicase nsP2 (EC
           3.4.22.-) (EC 3.1.3.33) (EC
          Length = 2493

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
 Frame = -2

Query: 249 PIMAPTCSERRRWMERHAKDVVS-RPCSLNHGSCVVGCCWLF 127
           P++A   S   RW   H  D+   +   +   S V+GCCW F
Sbjct: 383 PVVAQAFS---RWAREHRADLEDEKGLGVRERSLVMGCCWAF 421

>PSA_DICDI (P12729) Prespore-specific cell surface antigen PsA precursor (D19|
           protein)
          Length = 168

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = +1

Query: 52  TPLRSTTPALIP--SPTVLTTSTNRKRKQPATTNNT 153
           TP  + TP + P  +PTV  T TN     P+ T+ T
Sbjct: 110 TPAPTVTPTVTPTVTPTVTPTPTNTPNPTPSQTSTT 145

>R1AB_CVMA5 (P16342) Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein)|
            [Includes: Replicase polyprotein 1a (pp1a) (ORF1a)]
            [Contains: p28; p65; p210 (EC 3.4.22.-) (Papain-like
            proteinases 1/2) (PL1-PRO/PL2-PRO); Peptide HD2 (p44);
            3C-like proteinase
          Length = 7176

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 151  CCWLLLAVFFFCS 113
            CCW+L + F FCS
Sbjct: 3646 CCWILASTFLFCS 3658

>FKS26_MOUSE (Q8R3L2) Protein FKSG26|
          Length = 676

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = +1

Query: 154 RPMIERARPRYYIFGMSFHPPSSFR--TCRGHYRRRQHRPF 270
           R +IERA    Y    +FHP  S    TCR  YRR ++R F
Sbjct: 306 RDLIERA---LYSMECAFHPLFSLTSGTCRLDYRRPENRSF 343

>AT7L1_HUMAN (Q9ULK2) Ataxin-7-like protein 1 (Fragment)|
          Length = 864

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
 Frame = +1

Query: 37  SRYKTTPLRSTTPALIPS----PTVLTTSTNRKRKQPATTNNTRPMIERARPRYYIFGMS 204
           S +K     S  PA+IPS    P+   TS + K K  +T ++  P  ++ +P+      S
Sbjct: 599 STFKAPSAVSPIPAVIPSPSHKPSKTKTSKSSKVKDLSTRSDESPSNKKRKPQSSTSSSS 658

Query: 205 FHPPSSFRT 231
               SS +T
Sbjct: 659 SSSSSSLQT 667

>FA53B_MOUSE (Q8BGR5) Protein FAM53B|
          Length = 422

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +1

Query: 55  PLRSTTPALIPSPTVLTTSTNRKRKQPATTNNTRPMIERARP 180
           P  ++TPA  P     ++   R R QP   N+ +  ++R RP
Sbjct: 245 PSANSTPASTPELARRSSGLARSRSQPCVLNDKKIGVKRRRP 286

>MTR1L_HUMAN (Q13585) Melatonin-related receptor (G protein-coupled receptor 50)|
           (H9)
          Length = 613

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +1

Query: 58  LRSTTPALIPSPTVLTTSTN 117
           L S T A +P PTV+TTSTN
Sbjct: 575 LESDTIADLPDPTVVTTSTN 594

>PET_ECOLI (O68900) Serine protease pet precursor (EC 3.4.21.-)|
           (Plasmid-encoded toxin pet)
          Length = 1295

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
 Frame = +3

Query: 27  FNMIPIQDYSTALNNSSAYSI--SYRPNYEYEQKKKTASNNQQH 152
           F  +P+ D+S+A  N +A SI  +Y     +  K K+++N Q +
Sbjct: 94  FPALPVPDFSSATANGAATSIGGAYAVTVAHNAKNKSSANYQTY 137

>R1AB_CVMJH (P19751) Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein)|
            [Includes: Replicase polyprotein 1a (pp1a) (ORF1a)]
            [Contains: p28; p65; p210 (EC 3.4.22.-) (Papain-like
            proteinases 1/2) (PL1-PRO/PL2-PRO); Peptide HD2 (p44);
            3C-like proteinase
          Length = 7180

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 151  CCWLLLAVFFFCS 113
            CCW+L + F FCS
Sbjct: 3650 CCWILASTFLFCS 3662


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,422,324
Number of Sequences: 219361
Number of extensions: 821734
Number of successful extensions: 3308
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 2941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3260
length of database: 80,573,946
effective HSP length: 74
effective length of database: 64,341,232
effective search space used: 1544189568
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)