ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl27e09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|BT009451.1| Triticum aestivum clone wlmk8.pk0022.c11:fis, ful... 381 e-102
2gb|AF456245.1| Oryza sativa (japonica cultivar-group) NBS-LRR-li... 96 1e-16
3gb|AC119073.1| Oryza sativa ssp. japonica cv. Nipponbare OSJNBa0... 96 1e-16
4dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
5emb|AJ507098.1|HVU507098 Hordeum vulgare mRNA for NBS-LRR diseas... 96 1e-16
6gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 96 1e-16
7dbj|AK101773.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 6e-12
8gb|AY986485.1| Zea mays NBS-LRR type disease resistance protein ... 72 2e-09
9gb|AC133005.4| Oryza sativa (japonica cultivar-group) chromosome... 52 0.001
10gb|AC119072.1| Oryza sativa ssp. japonica cv. Nipponbare OSJNBa0... 52 0.001
11gb|AC110525.10| Mus musculus chromosome 8, clone RP23-82N11, com... 42 1.4
12gb|AC119670.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
13gb|AC158350.7| Mus musculus chromosome 8, clone RP24-250A3, comp... 42 1.4
14gb|AC119071.1| Oryza sativa ssp. japonica cv. Nipponbare OSJNBa0... 42 1.4
15gb|AC106854.5| Homo sapiens chromosome 18, clone CTD-2302G2, com... 42 1.4
16gb|AC091043.12| Homo sapiens chromosome 18, clone RP11-595B24, c... 42 1.4
17gb|AC105357.7| Homo sapiens chromosome 11, clone RP11-321F11, co... 40 5.6
18emb|AL023874.1|DMC100G10 Drosophila melanogaster cosmid clone 10... 40 5.6
19emb|AL603907.12| Mouse DNA sequence from clone RP23-139D10 on ch... 40 5.6
20gb|AY118458.1| Drosophila melanogaster GH01006 full insert cDNA 40 5.6
21gb|AC104145.7| Drosophila melanogaster X BAC RP98-30B1 (Roswell ... 40 5.6
22ref|NM_206616.1| Drosophila melanogaster CG2658-RB, transcript v... 40 5.6
23ref|NM_130661.1| Drosophila melanogaster CG2658-RA, transcript v... 40 5.6
24gb|AC096897.4| Homo sapiens BAC clone RP11-323K21 from 4, comple... 40 5.6
25gb|AE003425.3| Drosophila melanogaster chromosome X, section 9 o... 40 5.6
26dbj|AP006442.2| Homo sapiens genomic DNA, chromosome 11 clone:CM... 40 5.6
27gb|AC004054.1|AC004054 Homo sapiens chromosome 4 clone B220G8 ma... 40 5.6

>gb|BT009451.1| Triticum aestivum clone wlmk8.pk0022.c11:fis, full insert mRNA
            sequence
          Length = 1986

 Score =  381 bits (192), Expect = e-102
 Identities = 341/388 (87%), Gaps = 7/388 (1%)
 Strand = Plus / Minus

                                                                        
Query: 36   acggtacagaggcctctggaaggcaatggacaccaaccaatctttgagggata--aattt 93
            |||||||||||||||||||||||||||| |||| |||||||| |||||| |||  ||| |
Sbjct: 1846 acggtacagaggcctctggaaggcaatgcacacgaaccaatccttgaggaatataaatgt 1787

                                                                        
Query: 94   gttacagcatagaagtaccgaccaaatgctgttggcgatgtcgag----gcaaacttatt 149
            ||||||  ||||||||||||||||||||||| ||| ||||||||     ||||| |||||
Sbjct: 1786 gttacaatatagaagtaccgaccaaatgctgctggtgatgtcgataatcgcaaatttatt 1727

                                                                        
Query: 150  ggaatggttgaaagtatgatacagttgcactggaagcagcatacaagaata-cactgcag 208
            |||||| || |||| | ||| |||||| | |||| ||| ||| |||||||  ||||||||
Sbjct: 1726 ggaatgattaaaagcacgatgcagttggattggatgcaccatccaagaatggcactgcag 1667

                                                                        
Query: 209  aaagaaccgacttgccgcgtctagacacgaacctctggaacatgtagtatcttctgatgc 268
            |||||||||    ||||| |||| ||||||||||||||||||||||  |||||| |||||
Sbjct: 1666 aaagaaccggtgagccgcatctacacacgaacctctggaacatgtaccatcttcagatgc 1607

                                                                        
Query: 269  attcctttagtgtcccattgagttctgaaatccttgtgcaagttcagcagccagagcttc 328
            || |||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 1606 atcccttcagtgtcccattgagttctgaagtccttgtgcaagctcagcagccagagcttc 1547

                                                                        
Query: 329  ttaagggagcgaaggaattcaatgccttgagggactttatcgagcttcaacagcgataca 388
            ||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||| |||
Sbjct: 1546 ttaagggagcgaagggattcaatgccttgggggactttattgagcttcaacagcgacaca 1487

                                        
Query: 389  ttgtacaaaccatcaatgcagggaagag 416
             |||||||||||||||||||||||||||
Sbjct: 1486 atgtacaaaccatcaatgcagggaagag 1459



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>gb|AF456245.1| Oryza sativa (japonica cultivar-group) NBS-LRR-like protein (YR5)
            mRNA, complete cds
          Length = 3134

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 123/148 (83%)
 Strand = Plus / Minus

                                                                        
Query: 228  tctagacacgaacctctggaacatgtagtatcttctgatgcattcctttagtgtcccatt 287
            |||| ||||||| ||||||||||||  | ||||||||||||||||  ||  ||| |||||
Sbjct: 2866 tctaaacacgaatctctggaacatgctgcatcttctgatgcattctgtttttgtgccatt 2807

                                                                        
Query: 288  gagttctgaaatccttgtgcaagttcagcagccagagcttcttaagggagcgaaggaatt 347
            ||||| |||| ||| |||||| || ||| |||||||||||||| ||||  |||||| | |
Sbjct: 2806 gagttttgaagtccctgtgcaggtacagaagccagagcttcttcagggtccgaagggact 2747

                                        
Query: 348  caatgccttgagggactttatcgagctt 375
            ||||||| | ||||||| |||| |||||
Sbjct: 2746 caatgccctcagggactatatccagctt 2719



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>gb|AC119073.1| Oryza sativa ssp. japonica cv. Nipponbare OSJNBa0082N20 BAC genomic
             sequence, complete sequence
          Length = 138826

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 84/96 (87%)
 Strand = Plus / Minus

                                                                         
Query: 319   ccagagcttcttaagggagcgaaggaattcaatgccttgagggactttatcgagcttcaa 378
             |||||||||||| ||||||  |||| ||||||||||||||||||||||||| |||||| |
Sbjct: 40002 ccagagcttcttcagggaggcaagggattcaatgccttgagggactttatccagcttcca 39943

                                                 
Query: 379   cagcgatacattgtacaaaccatcaatgcagggaag 414
             ||  |||||| |||| ||||| |||||||| |||||
Sbjct: 39942 caatgatacaatgtataaaccttcaatgcatggaag 39907



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 123/148 (83%)
 Strand = Plus / Plus

                                                                         
Query: 228   tctagacacgaacctctggaacatgtagtatcttctgatgcattcctttagtgtcccatt 287
             |||| ||||||| ||||||||||||  | ||||||||||||||||  ||  ||| |||||
Sbjct: 13349 tctaaacacgaatctctggaacatgctgcatcttctgatgcattctgtttttgtgccatt 13408

                                                                         
Query: 288   gagttctgaaatccttgtgcaagttcagcagccagagcttcttaagggagcgaaggaatt 347
             ||||| |||| ||| |||||| || ||| |||||||||||||| ||||  |||||| | |
Sbjct: 13409 gagttttgaagtccctgtgcaggtacagaagccagagcttcttcagggtccgaagggact 13468

                                         
Query: 348   caatgccttgagggactttatcgagctt 375
             ||||||| | ||||||| |||| |||||
Sbjct: 13469 caatgccctcagggactatatccagctt 13496



 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 109/132 (82%)
 Strand = Plus / Minus

                                                                         
Query: 283   ccattgagttctgaaatccttgtgcaagttcagcagccagagcttcttaagggagcgaag 342
             |||||||||  |||| || ||||||| || || ||  ||||||||||| ||||||  |||
Sbjct: 89852 ccattgagtcttgaagtctttgtgcaggtccatcaaacagagcttctttagggaggcaag 89793

                                                                         
Query: 343   gaattcaatgccttgagggactttatcgagcttcaacagcgatacattgtacaaaccatc 402
             | ||||||||||||||||||||||||| ||||||  ||  |||||| |||| ||||| ||
Sbjct: 89792 ggattcaatgccttgagggactttatccagcttccgcaatgatacaatgtataaaccttc 89733

                         
Query: 403   aatgcagggaag 414
              ||||| |||||
Sbjct: 89732 gatgcatggaag 89721



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 78/94 (82%)
 Strand = Plus / Plus

                                                                         
Query: 321   agagcttcttaagggagcgaaggaattcaatgccttgagggactttatcgagcttcaaca 380
             |||||||||| ||||||  |||| | ||||||||||||||||| || || ||||||  ||
Sbjct: 19882 agagcttcttcagggagttaagggactcaatgccttgagggaccttgtccagcttcggca 19941

                                               
Query: 381   gcgatacattgtacaaaccatcaatgcagggaag 414
             || | ||| |||||||||  |||||||| |||||
Sbjct: 19942 gcaacacaatgtacaaacattcaatgcatggaag 19975



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 84/96 (87%)
 Strand = Plus / Minus

                                                                           
Query: 319     ccagagcttcttaagggagcgaaggaattcaatgccttgagggactttatcgagcttcaa 378
               |||||||||||| ||||||  |||| ||||||||||||||||||||||||| |||||| |
Sbjct: 6580792 ccagagcttcttcagggaggcaagggattcaatgccttgagggactttatccagcttcca 6580733

                                                   
Query: 379     cagcgatacattgtacaaaccatcaatgcagggaag 414
               ||  |||||| |||| ||||| |||||||| |||||
Sbjct: 6580732 caatgatacaatgtataaaccttcaatgcatggaag 6580697



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 123/148 (83%)
 Strand = Plus / Plus

                                                                           
Query: 228     tctagacacgaacctctggaacatgtagtatcttctgatgcattcctttagtgtcccatt 287
               |||| ||||||| ||||||||||||  | ||||||||||||||||  ||  ||| |||||
Sbjct: 6554139 tctaaacacgaatctctggaacatgctgcatcttctgatgcattctgtttttgtgccatt 6554198

                                                                           
Query: 288     gagttctgaaatccttgtgcaagttcagcagccagagcttcttaagggagcgaaggaatt 347
               ||||| |||| ||| |||||| || ||| |||||||||||||| ||||  |||||| | |
Sbjct: 6554199 gagttttgaagtccctgtgcaggtacagaagccagagcttcttcagggtccgaagggact 6554258

                                           
Query: 348     caatgccttgagggactttatcgagctt 375
               ||||||| | ||||||| |||| |||||
Sbjct: 6554259 caatgccctcagggactatatccagctt 6554286



 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 109/132 (82%)
 Strand = Plus / Minus

                                                                           
Query: 283     ccattgagttctgaaatccttgtgcaagttcagcagccagagcttcttaagggagcgaag 342
               |||||||||  |||| || ||||||| || || ||  ||||||||||| ||||||  |||
Sbjct: 6630642 ccattgagtcttgaagtctttgtgcaggtccatcaaacagagcttctttagggaggcaag 6630583

                                                                           
Query: 343     gaattcaatgccttgagggactttatcgagcttcaacagcgatacattgtacaaaccatc 402
               | ||||||||||||||||||||||||| ||||||  ||  |||||| |||| ||||| ||
Sbjct: 6630582 ggattcaatgccttgagggactttatccagcttccgcaatgatacaatgtataaaccttc 6630523

                           
Query: 403     aatgcagggaag 414
                ||||| |||||
Sbjct: 6630522 gatgcatggaag 6630511



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 78/94 (82%)
 Strand = Plus / Plus

                                                                           
Query: 321     agagcttcttaagggagcgaaggaattcaatgccttgagggactttatcgagcttcaaca 380
               |||||||||| ||||||  |||| | ||||||||||||||||| || || ||||||  ||
Sbjct: 6560672 agagcttcttcagggagttaagggactcaatgccttgagggaccttgtccagcttcggca 6560731

                                                 
Query: 381     gcgatacattgtacaaaccatcaatgcagggaag 414
               || | ||| |||||||||  |||||||| |||||
Sbjct: 6560732 gcaacacaatgtacaaacattcaatgcatggaag 6560765



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                     
Query: 326     ttcttaagggagcgaaggaattcaatgccttgagggac 363
               ||||||||||||| |||| |||||||||||| ||||||
Sbjct: 6455151 ttcttaagggagctaagggattcaatgccttcagggac 6455188



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                           
Query: 232     gacacgaacctctggaacatgtagtatcttctgatgcattcctttagtgtcccattgagt 291
               |||||| | ||||||||||||| | ||||| || |||||||| ||  | ||||| |||| 
Sbjct: 6806731 gacacgcaactctggaacatgttgcatcttttgttgcattccatttttttcccactgaga 6806672

                                
Query: 292     tctgaaatccttgtgca 308
               |||||||| ||| ||||
Sbjct: 6806671 tctgaaattcttatgca 6806655



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>emb|AJ507098.1|HVU507098 Hordeum vulgare mRNA for NBS-LRR disease resistance protein homologue
            (rga S-L8 gene)
          Length = 3261

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 150/184 (81%)
 Strand = Plus / Minus

                                                                        
Query: 231  agacacgaacctctggaacatgtagtatcttctgatgcattcctttagtgtcccattgag 290
            |||||||||||||  ||||||| |  |||||||| |||||||| ||  ||||||| ||||
Sbjct: 2968 agacacgaacctcctgaacatgcaccatcttctgctgcattccgttcttgtcccactgag 2909

                                                                        
Query: 291  ttctgaaatccttgtgcaagttcagcagccagagcttcttaagggagcgaaggaattcaa 350
            || ||||  ||   ||||||  || || |||||||||||| ||||||| |||| ||||||
Sbjct: 2908 ttttgaagcccccatgcaagcccaccaaccagagcttcttcagggagctaagggattcaa 2849

                                                                        
Query: 351  tgccttgagggactttatcgagcttcaacagcgatacattgtacaaaccatcaatgcagg 410
            ||||||||||||| ||||| |||||| ||| ||| |||   |||||||| || ||||| |
Sbjct: 2848 tgccttgagggaccttatccagcttcgacaacgacacaacatacaaaccttcgatgcacg 2789

                
Query: 411  gaag 414
            ||||
Sbjct: 2788 gaag 2785



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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 84/96 (87%)
 Strand = Plus / Minus

                                                                           
Query: 319     ccagagcttcttaagggagcgaaggaattcaatgccttgagggactttatcgagcttcaa 378
               |||||||||||| ||||||  |||| ||||||||||||||||||||||||| |||||| |
Sbjct: 6647259 ccagagcttcttcagggaggcaagggattcaatgccttgagggactttatccagcttcca 6647200

                                                   
Query: 379     cagcgatacattgtacaaaccatcaatgcagggaag 414
               ||  |||||| |||| ||||| |||||||| |||||
Sbjct: 6647199 caatgatacaatgtataaaccttcaatgcatggaag 6647164



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 123/148 (83%)
 Strand = Plus / Plus

                                                                           
Query: 228     tctagacacgaacctctggaacatgtagtatcttctgatgcattcctttagtgtcccatt 287
               |||| ||||||| ||||||||||||  | ||||||||||||||||  ||  ||| |||||
Sbjct: 6620606 tctaaacacgaatctctggaacatgctgcatcttctgatgcattctgtttttgtgccatt 6620665

                                                                           
Query: 288     gagttctgaaatccttgtgcaagttcagcagccagagcttcttaagggagcgaaggaatt 347
               ||||| |||| ||| |||||| || ||| |||||||||||||| ||||  |||||| | |
Sbjct: 6620666 gagttttgaagtccctgtgcaggtacagaagccagagcttcttcagggtccgaagggact 6620725

                                           
Query: 348     caatgccttgagggactttatcgagctt 375
               ||||||| | ||||||| |||| |||||
Sbjct: 6620726 caatgccctcagggactatatccagctt 6620753



 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 109/132 (82%)
 Strand = Plus / Minus

                                                                           
Query: 283     ccattgagttctgaaatccttgtgcaagttcagcagccagagcttcttaagggagcgaag 342
               |||||||||  |||| || ||||||| || || ||  ||||||||||| ||||||  |||
Sbjct: 6697109 ccattgagtcttgaagtctttgtgcaggtccatcaaacagagcttctttagggaggcaag 6697050

                                                                           
Query: 343     gaattcaatgccttgagggactttatcgagcttcaacagcgatacattgtacaaaccatc 402
               | ||||||||||||||||||||||||| ||||||  ||  |||||| |||| ||||| ||
Sbjct: 6697049 ggattcaatgccttgagggactttatccagcttccgcaatgatacaatgtataaaccttc 6696990

                           
Query: 403     aatgcagggaag 414
                ||||| |||||
Sbjct: 6696989 gatgcatggaag 6696978



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 78/94 (82%)
 Strand = Plus / Plus

                                                                           
Query: 321     agagcttcttaagggagcgaaggaattcaatgccttgagggactttatcgagcttcaaca 380
               |||||||||| ||||||  |||| | ||||||||||||||||| || || ||||||  ||
Sbjct: 6627139 agagcttcttcagggagttaagggactcaatgccttgagggaccttgtccagcttcggca 6627198

                                                 
Query: 381     gcgatacattgtacaaaccatcaatgcagggaag 414
               || | ||| |||||||||  |||||||| |||||
Sbjct: 6627199 gcaacacaatgtacaaacattcaatgcatggaag 6627232



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                     
Query: 326     ttcttaagggagcgaaggaattcaatgccttgagggac 363
               ||||||||||||| |||| |||||||||||| ||||||
Sbjct: 6521618 ttcttaagggagctaagggattcaatgccttcagggac 6521655



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                           
Query: 232     gacacgaacctctggaacatgtagtatcttctgatgcattcctttagtgtcccattgagt 291
               |||||| | ||||||||||||| | ||||| || |||||||| ||  | ||||| |||| 
Sbjct: 6873198 gacacgcaactctggaacatgttgcatcttttgttgcattccatttttttcccactgaga 6873139

                                
Query: 292     tctgaaatccttgtgca 308
               |||||||| ||| ||||
Sbjct: 6873138 tctgaaattcttatgca 6873122



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>dbj|AK101773.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033064L16, full
            insert sequence
          Length = 3374

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 109/132 (82%)
 Strand = Plus / Minus

                                                                        
Query: 283  ccattgagttctgaaatccttgtgcaagttcagcagccagagcttcttaagggagcgaag 342
            |||||||||  |||| || ||||||| || || ||  ||||||||||| ||||||  |||
Sbjct: 2961 ccattgagtcttgaagtctttgtgcaggtccatcaaacagagcttctttagggaggcaag 2902

                                                                        
Query: 343  gaattcaatgccttgagggactttatcgagcttcaacagcgatacattgtacaaaccatc 402
            | ||||||||||||||||||||||||| ||||||  ||  |||||| |||| ||||| ||
Sbjct: 2901 ggattcaatgccttgagggactttatccagcttccgcaatgatacaatgtataaaccttc 2842

                        
Query: 403  aatgcagggaag 414
             ||||| |||||
Sbjct: 2841 gatgcatggaag 2830



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>gb|AY986485.1| Zea mays NBS-LRR type disease resistance protein (MRPR1) mRNA,
            complete cds
          Length = 3256

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 75/88 (85%)
 Strand = Plus / Minus

                                                                        
Query: 321  agagcttcttaagggagcgaaggaattcaatgccttgagggactttatcgagcttcaaca 380
            |||||||||| |||||||||||  ||||||||||||||||||| ||||| |||| || ||
Sbjct: 2872 agagcttcttcagggagcgaagcgattcaatgccttgagggaccttatccagctccacca 2813

                                        
Query: 381  gcgatacattgtacaaaccatcaatgca 408
            | || ||| |||||| ||| || |||||
Sbjct: 2812 gtgacacaatgtacagaccttcgatgca 2785



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>gb|AC133005.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052C16,
              complete sequence
          Length = 137872

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                    
Query: 326    ttcttaagggagcgaaggaattcaatgccttgagggac 363
              ||||||||||||| |||| |||||||||||| ||||||
Sbjct: 126545 ttcttaagggagctaagggattcaatgccttcagggac 126582



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>gb|AC119072.1| Oryza sativa ssp. japonica cv. Nipponbare OSJNBa0073N20 BAC genomic
             sequence, complete sequence
          Length = 147289

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                   
Query: 326   ttcttaagggagcgaaggaattcaatgccttgagggac 363
             ||||||||||||| |||| |||||||||||| ||||||
Sbjct: 89079 ttcttaagggagctaagggattcaatgccttcagggac 89042



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>gb|AC110525.10| Mus musculus chromosome 8, clone RP23-82N11, complete sequence
          Length = 153281

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 75    atctttgagggataaatttgt 95
             |||||||||||||||||||||
Sbjct: 37479 atctttgagggataaatttgt 37499



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>gb|AC119670.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0007H22, complete sequence
          Length = 160938

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                         
Query: 232   gacacgaacctctggaacatgtagtatcttctgatgcattcctttagtgtcccattgagt 291
             |||||| | ||||||||||||| | ||||| || |||||||| ||  | ||||| |||| 
Sbjct: 80120 gacacgcaactctggaacatgttgcatcttttgttgcattccatttttttcccactgaga 80179

                              
Query: 292   tctgaaatccttgtgca 308
             |||||||| ||| ||||
Sbjct: 80180 tctgaaattcttatgca 80196



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>gb|AC158350.7| Mus musculus chromosome 8, clone RP24-250A3, complete sequence
          Length = 174965

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 75     atctttgagggataaatttgt 95
              |||||||||||||||||||||
Sbjct: 133080 atctttgagggataaatttgt 133100



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>gb|AC119071.1| Oryza sativa ssp. japonica cv. Nipponbare OSJNBa0044D15 BAC genomic
              sequence, complete sequence
          Length = 144544

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                          
Query: 232    gacacgaacctctggaacatgtagtatcttctgatgcattcctttagtgtcccattgagt 291
              |||||| | ||||||||||||| | ||||| || |||||||| ||  | ||||| |||| 
Sbjct: 137579 gacacgcaactctggaacatgttgcatcttttgttgcattccatttttttcccactgaga 137520

                               
Query: 292    tctgaaatccttgtgca 308
              |||||||| ||| ||||
Sbjct: 137519 tctgaaattcttatgca 137503



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>gb|AC106854.5| Homo sapiens chromosome 18, clone CTD-2302G2, complete sequence
          Length = 116879

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 280   gtcccattgagttctgaaatccttg 304
             ||||| |||||||||||||||||||
Sbjct: 97607 gtccctttgagttctgaaatccttg 97583



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>gb|AC091043.12| Homo sapiens chromosome 18, clone RP11-595B24, complete sequence
          Length = 208310

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 280    gtcccattgagttctgaaatccttg 304
              ||||| |||||||||||||||||||
Sbjct: 166668 gtccctttgagttctgaaatccttg 166692



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>gb|AC105357.7| Homo sapiens chromosome 11, clone RP11-321F11, complete sequence
          Length = 167772

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 388    attgtacaaaccatcaatgcagggaaga 415
              |||||| | |||||||||||||||||||
Sbjct: 132701 attgtaaagaccatcaatgcagggaaga 132728



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>emb|AL023874.1|DMC100G10 Drosophila melanogaster cosmid clone 100G10
          Length = 21489

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 2   aggtcaacaaaaaatacata 21
           ||||||||||||||||||||
Sbjct: 806 aggtcaacaaaaaatacata 825



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>emb|AL603907.12| Mouse DNA sequence from clone RP23-139D10 on chromosome 11 Contains a
             novel gene, complete sequence
          Length = 226006

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 305   tgcaagttcagcagccagag 324
             ||||||||||||||||||||
Sbjct: 13337 tgcaagttcagcagccagag 13356



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>gb|AY118458.1| Drosophila melanogaster GH01006 full insert cDNA
          Length = 3105

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 2    aggtcaacaaaaaatacata 21
            ||||||||||||||||||||
Sbjct: 3062 aggtcaacaaaaaatacata 3043



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>gb|AC104145.7| Drosophila melanogaster X BAC RP98-30B1 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 161569

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     aggtcaacaaaaaatacata 21
             ||||||||||||||||||||
Sbjct: 34295 aggtcaacaaaaaatacata 34314



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>ref|NM_206616.1| Drosophila melanogaster CG2658-RB, transcript variant B (CG2658),
            mRNA
          Length = 3088

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 2    aggtcaacaaaaaatacata 21
            ||||||||||||||||||||
Sbjct: 3062 aggtcaacaaaaaatacata 3043



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>ref|NM_130661.1| Drosophila melanogaster CG2658-RA, transcript variant A (CG2658),
            mRNA
          Length = 3033

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 2    aggtcaacaaaaaatacata 21
            ||||||||||||||||||||
Sbjct: 3008 aggtcaacaaaaaatacata 2989



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>gb|AC096897.4| Homo sapiens BAC clone RP11-323K21 from 4, complete sequence
          Length = 13000

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 388  attgtacaaaccatcaatgcagggaaga 415
            |||||| |||||||||||||| ||||||
Sbjct: 1303 attgtaaaaaccatcaatgcaaggaaga 1276



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>gb|AE003425.3| Drosophila melanogaster chromosome X, section 9 of 74 of the complete
             sequence
          Length = 309053

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     aggtcaacaaaaaatacata 21
             ||||||||||||||||||||
Sbjct: 60899 aggtcaacaaaaaatacata 60918



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>dbj|AP006442.2| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-105F10, complete
             sequence
          Length = 134532

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 388   attgtacaaaccatcaatgcagggaaga 415
             |||||| | |||||||||||||||||||
Sbjct: 62984 attgtaaagaccatcaatgcagggaaga 63011



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>gb|AC004054.1|AC004054 Homo sapiens chromosome 4 clone B220G8 map 4q21, complete sequence
          Length = 112184

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 388    attgtacaaaccatcaatgcagggaaga 415
              |||||| |||||||||||||| ||||||
Sbjct: 111487 attgtaaaaaccatcaatgcaaggaaga 111460


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,563,201
Number of Sequences: 3902068
Number of extensions: 3563201
Number of successful extensions: 65546
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65423
Number of HSP's gapped (non-prelim): 119
length of query: 416
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 394
effective length of database: 17,147,199,772
effective search space: 6755996710168
effective search space used: 6755996710168
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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