ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl27e08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_479072.1| Oryza sativa (japonica cultivar-group), mRNA 62 2e-06
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
3dbj|AP005809.4| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
4dbj|AP005807.3| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
5dbj|AK066770.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 46 0.094
7gb|AC145386.1| Oryza sativa chromosome 3 BAC OSJNBb0028K20 genom... 46 0.094
8gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 genom... 46 0.094
9dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.094
10dbj|AK101797.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.094
11dbj|AK099879.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.094
12ref|NM_013077.1| Rattus norvegicus tubby homolog (mouse) (Tub), ... 44 0.37
13dbj|AB011544.1| Rattus norvegicus mRNA for TUBBY protein, comple... 44 0.37
14gb|AC007558.3| Homo sapiens BAC clone RP11-148A10 from 7, comple... 42 1.5
15emb|AL391122.9| Human DNA sequence from clone RP11-122A8 on chro... 42 1.5
16dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
17gb|AC087091.2| Homo sapiens chromosome 3 clone RP11-605M1 map 3p... 42 1.5
18gb|AC017070.9| Homo sapiens BAC clone RP11-409F2 from 2, complet... 42 1.5
19dbj|AP004113.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
20dbj|AP004836.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
21gb|AC011609.9|AC011609 Homo sapiens 3 BAC RP11-114K9 (Roswell Pa... 42 1.5
22ref|NM_001017140.2| Xenopus tropicalis hypothetical protein LOC5... 40 5.8
23gb|AY102285.1| Homo sapiens RTN4 (RTN4) gene, complete sequence,... 40 5.8
24gb|AC124127.12| Mus musculus chromosome 19, clone RP23-150N4, co... 40 5.8
25ref|XM_458620.1| Debaryomyces hansenii CBS767 hypothetical prote... 40 5.8
26ref|XM_322144.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.8
27ref|XM_950709.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.8
28gb|AC113961.14| Mus musculus chromosome 19, clone RP23-18G1, com... 40 5.8
29gb|AC145805.2| Xenopus tropicalis clone CH216-85O8, complete seq... 40 5.8
30gb|AC131667.4| Mus musculus BAC clone RP23-290D15 from chromosom... 40 5.8
31emb|Z70036.1|CET01B4 Caenorhabditis elegans Cosmid T01B4, comple... 40 5.8
32gb|AC104675.3| Sus scrofa clone RP44-122H18, complete sequence 40 5.8
33emb|AL160274.9| Human DNA sequence from clone RP11-395N21 on chr... 40 5.8
34gb|AC124066.6| Homo sapiens chromosome 17, clone RP11-135L13, co... 40 5.8
35emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS... 40 5.8
36emb|AJ720844.1| Gallus gallus mRNA for hypothetical protein, clo... 40 5.8
37ref|NM_001006488.1| Gallus gallus eukaryotic translation initiat... 40 5.8
38gb|AC093807.3| Homo sapiens BAC clone RP11-330J16 from 4, comple... 40 5.8
39ref|XM_678692.1| PREDICTED: Danio rerio similar to Serine/threon... 40 5.8
40gb|AC024198.7| Homo sapiens BAC clone RP11-777N19 from 4, comple... 40 5.8
41ref|NM_078254.1| Caenorhabditis elegans TWiK family of potassium... 40 5.8
42gb|AY571818.1| Hymenobacter sp. 34/38 16S ribosomal RNA gene, pa... 40 5.8
43gb|AC087071.2|AC087071 Homo sapiens chromosome 7 clone RP11-775D... 40 5.8
44gb|AC097473.3| Homo sapiens BAC clone RP11-75N20 from 4, complet... 40 5.8
45gb|AC013414.7| Homo sapiens BAC clone RP11-560I3 from 2, complet... 40 5.8
46gb|AF285860.1|AF285860 Wuchereria bancrofti 20/22kDa protein mRN... 40 5.8
47gb|AF322393.1| Mus musculus excitatory amino acid carrier (Slc1a... 40 5.8
48dbj|AP004799.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
49emb|Y18834.1|HROY18834 Hymenobacter roseosalivarius 16S rRNA gen... 40 5.8
50emb|Y18833.1|HROY18833 Hymenobacter roseosalivarius 16S rRNA gen... 40 5.8
51dbj|AK108836.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
52emb|BX255904.6| Zebrafish DNA sequence from clone DKEY-15J16 in ... 40 5.8
53emb|CR388170.5| Zebrafish DNA sequence from clone CH211-87E4 in ... 40 5.8
54emb|BX276086.4| Zebrafish DNA sequence from clone CH211-114C9 in... 40 5.8
55emb|CR760991.2| Xenopus tropicalis finished cDNA, clone TEgg055l14 40 5.8
56emb|AJ871473.1| Hymenobacter roseosalivarius partial 16S rRNA ge... 40 5.8
57gb|U39581.1|TBU39581 Trypanoplasma borreli large subunit ribosom... 40 5.8
58emb|AL928843.9| Zebrafish DNA sequence from clone DKEY-7P8 in li... 40 5.8
59gb|AC163287.4| Mus musculus BAC clone RP23-279E21 from chromosom... 40 5.8
60emb|AL160492.5|HS162E17 Homo sapiens chromosome 17 sequence from... 40 5.8 
>ref|XM_479072.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3136

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 76/91 (83%)
 Strand = Plus / Minus

                                                                        
Query: 316  tttcatcctcatcctcttcggagcattttgctgccaaactctcggataggagccggtcaa 375
            |||||||| |||||||||| |||||||||   ||  ||||||| ||| | |||| |||||
Sbjct: 2820 tttcatccccatcctcttcagagcattttatcgctgaactctcagattgaagcctgtcaa 2761

                                           
Query: 376  cctctgtgcacaattccttgaaaagacgcca 406
            ||||||||||||  ||||| ||||| |||||
Sbjct: 2760 cctctgtgcacaggtccttaaaaagtcgcca 2730



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                        
Query: 150  ttccattgtccagcttgcatcttctctgtagcctcgccacctataacctcgtcaatgagg 209
            ||||| |||||| ||||||||||| |||| |||||  | | ||| |||||||||||||||
Sbjct: 2983 ttccactgtccaccttgcatcttccctgtggcctcatcccatatgacctcgtcaatgagg 2924

               
Query: 210  tcc 212
            |||
Sbjct: 2923 tcc 2921
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 76/91 (83%)
 Strand = Plus / Plus

                                                                            
Query: 316      tttcatcctcatcctcttcggagcattttgctgccaaactctcggataggagccggtcaa 375
                |||||||| |||||||||| |||||||||   ||  ||||||| ||| | |||| |||||
Sbjct: 24611062 tttcatccccatcctcttcagagcattttatcgctgaactctcagattgaagcctgtcaa 24611121

                                               
Query: 376      cctctgtgcacaattccttgaaaagacgcca 406
                ||||||||||||  ||||| ||||| |||||
Sbjct: 24611122 cctctgtgcacaggtccttaaaaagtcgcca 24611152



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                            
Query: 150      ttccattgtccagcttgcatcttctctgtagcctcgccacctataacctcgtcaatgagg 209
                ||||| |||||| ||||||||||| |||| |||||  | | ||| |||||||||||||||
Sbjct: 24610899 ttccactgtccaccttgcatcttccctgtggcctcatcccatatgacctcgtcaatgagg 24610958

                   
Query: 210      tcc 212
                |||
Sbjct: 24610959 tcc 24610961
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>dbj|AP005809.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0039M16
          Length = 133229

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 76/91 (83%)
 Strand = Plus / Plus

                                                                         
Query: 316   tttcatcctcatcctcttcggagcattttgctgccaaactctcggataggagccggtcaa 375
             |||||||| |||||||||| |||||||||   ||  ||||||| ||| | |||| |||||
Sbjct: 67129 tttcatccccatcctcttcagagcattttatcgctgaactctcagattgaagcctgtcaa 67188

                                            
Query: 376   cctctgtgcacaattccttgaaaagacgcca 406
             ||||||||||||  ||||| ||||| |||||
Sbjct: 67189 cctctgtgcacaggtccttaaaaagtcgcca 67219



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                         
Query: 150   ttccattgtccagcttgcatcttctctgtagcctcgccacctataacctcgtcaatgagg 209
             ||||| |||||| ||||||||||| |||| |||||  | | ||| |||||||||||||||
Sbjct: 66966 ttccactgtccaccttgcatcttccctgtggcctcatcccatatgacctcgtcaatgagg 67025

                
Query: 210   tcc 212
             |||
Sbjct: 67026 tcc 67028
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>dbj|AP005807.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBb0018H10
          Length = 135879

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 76/91 (83%)
 Strand = Plus / Plus

                                                                          
Query: 316    tttcatcctcatcctcttcggagcattttgctgccaaactctcggataggagccggtcaa 375
              |||||||| |||||||||| |||||||||   ||  ||||||| ||| | |||| |||||
Sbjct: 104356 tttcatccccatcctcttcagagcattttatcgctgaactctcagattgaagcctgtcaa 104415

                                             
Query: 376    cctctgtgcacaattccttgaaaagacgcca 406
              ||||||||||||  ||||| ||||| |||||
Sbjct: 104416 cctctgtgcacaggtccttaaaaagtcgcca 104446



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                          
Query: 150    ttccattgtccagcttgcatcttctctgtagcctcgccacctataacctcgtcaatgagg 209
              ||||| |||||| ||||||||||| |||| |||||  | | ||| |||||||||||||||
Sbjct: 104193 ttccactgtccaccttgcatcttccctgtggcctcatcccatatgacctcgtcaatgagg 104252

                 
Query: 210    tcc 212
              |||
Sbjct: 104253 tcc 104255
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>dbj|AK066770.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088M15, full
            insert sequence
          Length = 3135

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                        
Query: 316  tttcatcctcatcctcttcggagcattttgctgccaaactctcggataggagccggtcaa 375
            |||||||| |||||||||| |||||||||   ||  ||||||| ||| | |||| |||||
Sbjct: 2819 tttcatccccatcctcttcagagcattttatcgctgaactctcagattgaagcctgtcaa 2760

                        
Query: 376  cctctgtgcaca 387
            ||||||||||||
Sbjct: 2759 cctctgtgcaca 2748



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                        
Query: 150  ttccattgtccagcttgcatcttctctgtagcctcgccacctataacctcgtcaatgagg 209
            ||||| |||||| ||||||||||| |||| |||||  | | ||| |||||||||||||||
Sbjct: 2982 ttccactgtccaccttgcatcttccctgtggcctcatcccatatgacctcgtcaatgagg 2923

               
Query: 210  tcc 212
            |||
Sbjct: 2922 tcc 2920
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 390      tccttgaaaagacgccacccacttaacttccttga 424
                |||||||||||  ||||||||||||||||| ||||
Sbjct: 17238593 tccttgaaaagttgccacccacttaacttctttga 17238559
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>gb|AC145386.1| Oryza sativa chromosome 3 BAC OSJNBb0028K20 genomic sequence, complete
             sequence
          Length = 115326

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 390   tccttgaaaagacgccacccacttaacttccttga 424
             |||||||||||  ||||||||||||||||| ||||
Sbjct: 71337 tccttgaaaagttgccacccacttaacttctttga 71303
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>gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 genomic sequence, complete
              sequence
          Length = 153247

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                 
Query: 390    tccttgaaaagacgccacccacttaacttccttga 424
              |||||||||||  ||||||||||||||||| ||||
Sbjct: 129958 tccttgaaaagttgccacccacttaacttctttga 129924
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 390      tccttgaaaagacgccacccacttaacttccttga 424
                |||||||||||  ||||||||||||||||| ||||
Sbjct: 17232134 tccttgaaaagttgccacccacttaacttctttga 17232100
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>dbj|AK101797.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033066F10, full
            insert sequence
          Length = 3310

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 390  tccttgaaaagacgccacccacttaacttccttga 424
            |||||||||||  ||||||||||||||||| ||||
Sbjct: 2864 tccttgaaaagttgccacccacttaacttctttga 2830
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>dbj|AK099879.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111J07, full
            insert sequence
          Length = 3203

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 390  tccttgaaaagacgccacccacttaacttccttga 424
            |||||||||||  ||||||||||||||||| ||||
Sbjct: 2802 tccttgaaaagttgccacccacttaacttctttga 2768
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>ref|NM_013077.1| Rattus norvegicus tubby homolog (mouse) (Tub), mRNA
          Length = 1582

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 313 tgttttcatcctcatcctcttc 334
           ||||||||||||||||||||||
Sbjct: 617 tgttttcatcctcatcctcttc 596
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>dbj|AB011544.1| Rattus norvegicus mRNA for TUBBY protein, complete cds
          Length = 1582

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 313 tgttttcatcctcatcctcttc 334
           ||||||||||||||||||||||
Sbjct: 617 tgttttcatcctcatcctcttc 596
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>gb|AC007558.3| Homo sapiens BAC clone RP11-148A10 from 7, complete sequence
          Length = 120141

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 13    atatttcttccatataattca 33
             |||||||||||||||||||||
Sbjct: 82879 atatttcttccatataattca 82899
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>emb|AL391122.9| Human DNA sequence from clone RP11-122A8 on chromosome 13 Contains the
             5' end of the gene for zizimin1, a ribosomal protein S6
             (RPS6) pseudogene, a pseudogene similar to part of
             glyceraldehyde-3-phosphate dehydrogenase (GAPD) and a CpG
             island, complete sequence
          Length = 173336

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 7     ataattatatttcttccatataatt 31
             |||||||||||| ||||||||||||
Sbjct: 90051 ataattatatttgttccatataatt 90027
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 29      attcagtcttcagagaaaaaataca 53
               |||||||||||||||| ||||||||
Sbjct: 3831279 attcagtcttcagagacaaaataca 3831303



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 30      ttcagtcttcagagaaaaaa 49
               ||||||||||||||||||||
Sbjct: 1826837 ttcagtcttcagagaaaaaa 1826818
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>gb|AC087091.2| Homo sapiens chromosome 3 clone RP11-605M1 map 3p, complete sequence
          Length = 153013

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 29    attcagtcttcagagaaaaaa 49
             |||||||||||||||||||||
Sbjct: 95258 attcagtcttcagagaaaaaa 95238
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>gb|AC017070.9| Homo sapiens BAC clone RP11-409F2 from 2, complete sequence
          Length = 150942

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 3     aggaataattatatttcttcc 23
             |||||||||||||||||||||
Sbjct: 85106 aggaataattatatttcttcc 85126
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>dbj|AP004113.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1116_A06
          Length = 176062

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 29    attcagtcttcagagaaaaaataca 53
             |||||||||||||||| ||||||||
Sbjct: 87611 attcagtcttcagagacaaaataca 87635
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>dbj|AP004836.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0030G02
          Length = 187265

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 29    attcagtcttcagagaaaaaataca 53
             |||||||||||||||| ||||||||
Sbjct: 29750 attcagtcttcagagacaaaataca 29774
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>gb|AC011609.9|AC011609 Homo sapiens 3 BAC RP11-114K9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 184680

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 29    attcagtcttcagagaaaaaa 49
             |||||||||||||||||||||
Sbjct: 83362 attcagtcttcagagaaaaaa 83342
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>ref|NM_001017140.2| Xenopus tropicalis hypothetical protein LOC549894 (LOC549894), mRNA
          Length = 1122

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 315 ttttcatcctcatcctcttc 334
           ||||||||||||||||||||
Sbjct: 615 ttttcatcctcatcctcttc 596
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>gb|AY102285.1| Homo sapiens RTN4 (RTN4) gene, complete sequence, alternatively spliced
          Length = 90756

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 278   tttcatctcatacaatgcat 297
             ||||||||||||||||||||
Sbjct: 66206 tttcatctcatacaatgcat 66187
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>gb|AC124127.12| Mus musculus chromosome 19, clone RP23-150N4, complete sequence
          Length = 194548

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 202   caatgaggtccctgaaaatg 221
             ||||||||||||||||||||
Sbjct: 18627 caatgaggtccctgaaaatg 18646
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>ref|XM_458620.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0D04213g)
           partial mRNA
          Length = 2490

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 199 cgtcaatgaggtccctgaaa 218
           ||||||||||||||||||||
Sbjct: 270 cgtcaatgaggtccctgaaa 289
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>ref|XM_322144.1| Neurospora crassa OR74A hypothetical protein (NCU00059.1) partial
            mRNA
          Length = 2490

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 312  atgttttcatcctcatcctc 331
            ||||||||||||||||||||
Sbjct: 1976 atgttttcatcctcatcctc 1957
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>ref|XM_950709.1| Neurospora crassa OR74A hypothetical protein (NCU00059.1) partial
            mRNA
          Length = 2490

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 312  atgttttcatcctcatcctc 331
            ||||||||||||||||||||
Sbjct: 1976 atgttttcatcctcatcctc 1957
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>gb|AC113961.14| Mus musculus chromosome 19, clone RP23-18G1, complete sequence
          Length = 256791

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 202    caatgaggtccctgaaaatg 221
              ||||||||||||||||||||
Sbjct: 163342 caatgaggtccctgaaaatg 163361
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>gb|AC145805.2| Xenopus tropicalis clone CH216-85O8, complete sequence
          Length = 166207

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 311   tatgttttcatcctcatcct 330
             ||||||||||||||||||||
Sbjct: 84525 tatgttttcatcctcatcct 84544
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>gb|AC131667.4| Mus musculus BAC clone RP23-290D15 from chromosome 10, complete
             sequence
          Length = 196233

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 107   tcatattcagtttatactactgaa 130
             |||| |||||||||||||||||||
Sbjct: 53081 tcatgttcagtttatactactgaa 53058
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>emb|Z70036.1|CET01B4 Caenorhabditis elegans Cosmid T01B4, complete sequence
          Length = 34581

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 315   ttttcatcctcatcctcttc 334
             ||||||||||||||||||||
Sbjct: 27609 ttttcatcctcatcctcttc 27590
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>gb|AC104675.3| Sus scrofa clone RP44-122H18, complete sequence
          Length = 176345

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 9     aattatatttcttccatata 28
             ||||||||||||||||||||
Sbjct: 50839 aattatatttcttccatata 50820
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>emb|AL160274.9| Human DNA sequence from clone RP11-395N21 on chromosome 9 Contains
            the 3' end of the UNC13 gene for unc-13-like (C.
            elegans)(MUNC13, hmunc13) and the 5' end of a novel gene,
            complete sequence
          Length = 144102

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 300  tcagataatggtatgttttc 319
            ||||||||||||||||||||
Sbjct: 9114 tcagataatggtatgttttc 9095
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>gb|AC124066.6| Homo sapiens chromosome 17, clone RP11-135L13, complete sequence
          Length = 160380

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   actgaaaggcagctgcctac 144
             ||||||||||||||||||||
Sbjct: 37849 actgaaaggcagctgcctac 37830
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>emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS767 of Debaryomyces
              hansenii
          Length = 1602771

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 199    cgtcaatgaggtccctgaaa 218
              ||||||||||||||||||||
Sbjct: 299898 cgtcaatgaggtccctgaaa 299917
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>emb|AJ720844.1| Gallus gallus mRNA for hypothetical protein, clone 27j21
          Length = 1908

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 311  tatgttttcatcctcatcctcttc 334
            |||||||||||| |||||||||||
Sbjct: 1494 tatgttttcatcttcatcctcttc 1471
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>ref|NM_001006488.1| Gallus gallus eukaryotic translation initiation factor 5 (EIF5), mRNA
          Length = 1908

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 311  tatgttttcatcctcatcctcttc 334
            |||||||||||| |||||||||||
Sbjct: 1494 tatgttttcatcttcatcctcttc 1471
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>gb|AC093807.3| Homo sapiens BAC clone RP11-330J16 from 4, complete sequence
          Length = 171415

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 113   tcagtttatactactgaaag 132
             ||||||||||||||||||||
Sbjct: 18541 tcagtttatactactgaaag 18560
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>ref|XM_678692.1| PREDICTED: Danio rerio similar to Serine/threonine-protein kinase
            Nek1 (NimA-related protein kinase 1) (NY-REN-55 antigen)
            (LOC556002), mRNA
          Length = 3624

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 312  atgttttcatcctcatcctc 331
            ||||||||||||||||||||
Sbjct: 3476 atgttttcatcctcatcctc 3457
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>gb|AC024198.7| Homo sapiens BAC clone RP11-777N19 from 4, complete sequence
          Length = 194702

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 24     atataattcagtcttcagagaaaa 47
              |||||||||| |||||||||||||
Sbjct: 169344 atataattcattcttcagagaaaa 169321
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>ref|NM_078254.1| Caenorhabditis elegans TWiK family of potassium channels family
            member (twk-22) (twk-22) mRNA, complete cds
          Length = 2274

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 315  ttttcatcctcatcctcttc 334
            ||||||||||||||||||||
Sbjct: 2261 ttttcatcctcatcctcttc 2242
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>gb|AY571818.1| Hymenobacter sp. 34/38 16S ribosomal RNA gene, partial sequence
          Length = 813

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 131 aggcagctgcctacgcaatt 150
           ||||||||||||||||||||
Sbjct: 88  aggcagctgcctacgcaatt 69
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>gb|AC087071.2|AC087071 Homo sapiens chromosome 7 clone RP11-775D22, complete sequence
          Length = 183353

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 27     taattcagtcttcagagaaaaaat 50
              ||||||| ||||||||||||||||
Sbjct: 141493 taattcactcttcagagaaaaaat 141470
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>gb|AC097473.3| Homo sapiens BAC clone RP11-75N20 from 4, complete sequence
          Length = 150573

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 204    atgaggtccctgaaaatgga 223
              ||||||||||||||||||||
Sbjct: 105291 atgaggtccctgaaaatgga 105310
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>gb|AC013414.7| Homo sapiens BAC clone RP11-560I3 from 2, complete sequence
          Length = 161390

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 278    tttcatctcatacaatgcat 297
              ||||||||||||||||||||
Sbjct: 151581 tttcatctcatacaatgcat 151600
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>gb|AF285860.1|AF285860 Wuchereria bancrofti 20/22kDa protein mRNA, complete cds
          Length = 558

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 315 ttttcatcctcatcctcttc 334
           ||||||||||||||||||||
Sbjct: 278 ttttcatcctcatcctcttc 259
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>gb|AF322393.1| Mus musculus excitatory amino acid carrier (Slc1a1) gene, partial cds,
             alternatively spliced
          Length = 25407

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 202   caatgaggtccctgaaaatg 221
             ||||||||||||||||||||
Sbjct: 18803 caatgaggtccctgaaaatg 18784
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>dbj|AP004799.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0585B01
          Length = 133231

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    ttcagtcttcagagaaaaaa 49
             ||||||||||||||||||||
Sbjct: 63481 ttcagtcttcagagaaaaaa 63462
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>emb|Y18834.1|HROY18834 Hymenobacter roseosalivarius 16S rRNA gene, strain AA688
          Length = 1508

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 131 aggcagctgcctacgcaatt 150
           ||||||||||||||||||||
Sbjct: 716 aggcagctgcctacgcaatt 697
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>emb|Y18833.1|HROY18833 Hymenobacter roseosalivarius 16S rRNA gene, strain AA718
          Length = 1508

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 131 aggcagctgcctacgcaatt 150
           ||||||||||||||||||||
Sbjct: 716 aggcagctgcctacgcaatt 697
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>dbj|AK108836.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-151-G10, full
            insert sequence
          Length = 1127

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 30   ttcagtcttcagagaaaaaa 49
            ||||||||||||||||||||
Sbjct: 1068 ttcagtcttcagagaaaaaa 1087
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>emb|BX255904.6| Zebrafish DNA sequence from clone DKEY-15J16 in linkage group 20,
             complete sequence
          Length = 228691

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 312   atgttttcatcctcatcctc 331
             ||||||||||||||||||||
Sbjct: 34702 atgttttcatcctcatcctc 34683
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>emb|CR388170.5| Zebrafish DNA sequence from clone CH211-87E4 in linkage group 20,
              complete sequence
          Length = 174079

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 312    atgttttcatcctcatcctc 331
              ||||||||||||||||||||
Sbjct: 137278 atgttttcatcctcatcctc 137297
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>emb|BX276086.4| Zebrafish DNA sequence from clone CH211-114C9 in linkage group 20,
             complete sequence
          Length = 172431

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 312   atgttttcatcctcatcctc 331
             ||||||||||||||||||||
Sbjct: 37853 atgttttcatcctcatcctc 37834
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>emb|CR760991.2| Xenopus tropicalis finished cDNA, clone TEgg055l14
          Length = 1122

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 315 ttttcatcctcatcctcttc 334
           ||||||||||||||||||||
Sbjct: 615 ttttcatcctcatcctcttc 596
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>emb|AJ871473.1| Hymenobacter roseosalivarius partial 16S rRNA gene, isolate CP5BT
          Length = 535

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 131 aggcagctgcctacgcaatt 150
           ||||||||||||||||||||
Sbjct: 374 aggcagctgcctacgcaatt 355
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>gb|U39581.1|TBU39581 Trypanoplasma borreli large subunit ribosomal RNA
          Length = 984

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 124 tactgaaaggcagctgcctacgca 147
           |||||||||| |||||||||||||
Sbjct: 373 tactgaaagggagctgcctacgca 396
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>emb|AL928843.9| Zebrafish DNA sequence from clone DKEY-7P8 in linkage group 7,
            complete sequence
          Length = 179577

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 24   atataattcagtcttcagagaaaa 47
            |||||||||||| |||||||||||
Sbjct: 2513 atataattcagtattcagagaaaa 2536
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>gb|AC163287.4| Mus musculus BAC clone RP23-279E21 from chromosome 8, complete sequence
          Length = 201346

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 203    aatgaggtccctgaaaatgg 222
              ||||||||||||||||||||
Sbjct: 142636 aatgaggtccctgaaaatgg 142655
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>emb|AL160492.5|HS162E17 Homo sapiens chromosome 17 sequence from PAC RPCI-1 162E17 region
             D17S842-D17S953 map 17p11.2, complete sequence
          Length = 124940

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 125   actgaaaggcagctgcctac 144
             ||||||||||||||||||||
Sbjct: 76112 actgaaaggcagctgcctac 76131


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,167,835
Number of Sequences: 3902068
Number of extensions: 5167835
Number of successful extensions: 92408
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92184
Number of HSP's gapped (non-prelim): 224
length of query: 432
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 410
effective length of database: 17,147,199,772
effective search space: 7030351906520
effective search space used: 7030351906520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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