ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl27e06 |
|---|---|
| Clone Library Name | barley_pub |
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 85.1 bits (209), Expect = 4e-17 Identities = 39/48 (81%), Positives = 41/48 (85%) Frame = -1 Query: 404 VAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSIPI 261 V MN DP+LKNR GPAKFPYMLLYPNTSDH G A GLTA+GIPNSI I Sbjct: 815 VGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIPNSISI 862
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 76.6 bits (187), Expect = 1e-14 Identities = 36/48 (75%), Positives = 39/48 (81%) Frame = -1 Query: 404 VAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSIPI 261 V MN D LKNR GPA+FPYMLLYPNTSD TG A G+TA+GIPNSI I Sbjct: 819 VGMNGDAGLKNRNGPAEFPYMLLYPNTSDVTGAAAGITAKGIPNSISI 866
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 75.9 bits (185), Expect = 2e-14 Identities = 34/46 (73%), Positives = 38/46 (82%) Frame = -1 Query: 398 MNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSIPI 261 MN DP LKNR GPA FPY L++PNTSD+ G AEG+TARGIPNSI I Sbjct: 818 MNKDPLLKNRVGPANFPYTLMFPNTSDNKGAAEGITARGIPNSISI 863
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 73.9 bits (180), Expect = 8e-14 Identities = 35/48 (72%), Positives = 36/48 (75%) Frame = -1 Query: 404 VAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSIPI 261 VAMN DP KNR GP FPY LLYPNTSD G A GL+ARGIPNSI I Sbjct: 823 VAMNKDPHRKNRVGPTNFPYTLLYPNTSDLKGDAAGLSARGIPNSISI 870
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 63.9 bits (154), Expect = 9e-11 Identities = 32/47 (68%), Positives = 35/47 (74%), Gaps = 1/47 (2%) Frame = -1 Query: 398 MNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQ-AEGLTARGIPNSIPI 261 MN + LKNR GP K PYMLLYPNTSD T + +GLTA GIPNSI I Sbjct: 831 MNGNSALKNRNGPVKMPYMLLYPNTSDVTKEKGQGLTAMGIPNSISI 877
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 53.1 bits (126), Expect = 2e-07 Identities = 27/47 (57%), Positives = 30/47 (63%) Frame = -1 Query: 401 AMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSIPI 261 A NSDP L+NRTGP + PY LL H EGLT +GIPNSI I Sbjct: 824 ARNSDPSLRNRTGPVQLPYTLL------HRSSEEGLTFKGIPNSISI 864
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 52.8 bits (125), Expect = 2e-07 Identities = 27/48 (56%), Positives = 31/48 (64%) Frame = -1 Query: 404 VAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSIPI 261 + N D L+NR GPAK PY LLYP++ EGLT RGIPNSI I Sbjct: 812 IEKNKDETLRNRYGPAKMPYTLLYPSSE------EGLTFRGIPNSISI 853
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 52.4 bits (124), Expect = 3e-07 Identities = 26/45 (57%), Positives = 30/45 (66%) Frame = -1 Query: 395 NSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSIPI 261 N+D L+NR GP K PY LLYP++ EGLT RGIPNSI I Sbjct: 828 NNDESLRNRYGPVKMPYTLLYPSSE------EGLTCRGIPNSISI 866
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 50.4 bits (119), Expect = 1e-06 Identities = 25/45 (55%), Positives = 31/45 (68%) Frame = -1 Query: 395 NSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSIPI 261 N+D +L+NR GP + PY LLYP++ EGLT RGIPNSI I Sbjct: 823 NNDEKLRNRHGPVEMPYTLLYPSSK------EGLTFRGIPNSISI 861
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 50.1 bits (118), Expect = 1e-06 Identities = 25/45 (55%), Positives = 29/45 (64%) Frame = -1 Query: 395 NSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSIPI 261 N+D L NR GP + PY LL+PN +EGLT RGIPNSI I Sbjct: 828 NNDQSLSNRLGPVQLPYTLLHPN-------SEGLTCRGIPNSISI 865
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 49.3 bits (116), Expect = 2e-06 Identities = 27/49 (55%), Positives = 32/49 (65%), Gaps = 1/49 (2%) Frame = -1 Query: 404 VAMNSDPQLK-NRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSIPI 261 V N+DP L+ NR GP + PY LLYP++ EGLT RGIPNSI I Sbjct: 797 VRRNNDPSLQGNRLGPVQLPYTLLYPSSE------EGLTFRGIPNSISI 839
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 49.3 bits (116), Expect = 2e-06 Identities = 25/45 (55%), Positives = 27/45 (60%) Frame = -1 Query: 395 NSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSIPI 261 N D L+NR GP K PY +L P D EGLT RGIPNSI I Sbjct: 823 NKDSSLRNRNGPVKMPYTVLLPTCED-----EGLTFRGIPNSISI 862
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 48.5 bits (114), Expect = 4e-06 Identities = 24/45 (53%), Positives = 30/45 (66%) Frame = -1 Query: 395 NSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSIPI 261 N+DP L +R GP + PY LL+P++ EGLT RGIPNSI I Sbjct: 826 NNDPSLYHRVGPVQLPYTLLHPSSK------EGLTFRGIPNSISI 864
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 47.8 bits (112), Expect = 6e-06 Identities = 24/45 (53%), Positives = 30/45 (66%) Frame = -1 Query: 395 NSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSIPI 261 N+D +L+NR GP + PY LL P++ EGLT RGIPNSI I Sbjct: 819 NNDEKLRNRCGPVQMPYTLLLPSSK------EGLTFRGIPNSISI 857
>LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment)| Length = 741 Score = 47.0 bits (110), Expect = 1e-05 Identities = 24/42 (57%), Positives = 28/42 (66%) Frame = -1 Query: 404 VAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGI 279 V N+D L+NRTGPAK PY LLYP++ EGLT RGI Sbjct: 706 VQKNNDETLRNRTGPAKMPYTLLYPSSE------EGLTFRGI 741
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 47.0 bits (110), Expect = 1e-05 Identities = 23/46 (50%), Positives = 28/46 (60%) Frame = -1 Query: 398 MNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSIPI 261 MNS KNR+GP PY LL+P + EGLT +GIPNS+ I Sbjct: 820 MNSHKSWKNRSGPVNVPYTLLFPTSE------EGLTGKGIPNSVSI 859
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 46.2 bits (108), Expect = 2e-05 Identities = 23/45 (51%), Positives = 28/45 (62%) Frame = -1 Query: 395 NSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSIPI 261 N D LKNRTG K PY LL+P++ G+T RGIPNS+ I Sbjct: 821 NDDETLKNRTGLVKMPYTLLFPSSEG------GVTGRGIPNSVSI 859
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 42.4 bits (98), Expect = 3e-04 Identities = 21/48 (43%), Positives = 27/48 (56%) Frame = -1 Query: 404 VAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSIPI 261 + N D L NR+GP PY LL+P + GLT +GIPNS+ I Sbjct: 820 IQRNGDNILTNRSGPVNAPYTLLFPTSEG------GLTGKGIPNSVSI 861
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 41.6 bits (96), Expect = 5e-04 Identities = 21/45 (46%), Positives = 26/45 (57%) Frame = -1 Query: 395 NSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSIPI 261 N + L NRTGP PY LL+P + GLT +GIPNS+ I Sbjct: 822 NGNNILTNRTGPVNAPYTLLFPTSEG------GLTGKGIPNSVSI 860
>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)| Length = 899 Score = 39.3 bits (90), Expect = 0.002 Identities = 18/45 (40%), Positives = 26/45 (57%) Frame = -1 Query: 395 NSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSIPI 261 N+DP +NR G PY L+ P++ G+T RG+PNS+ I Sbjct: 861 NADPSRRNRCGAGVLPYELMAPSS------GPGITCRGVPNSVTI 899
>LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:3) Length = 896 Score = 37.7 bits (86), Expect = 0.007 Identities = 21/45 (46%), Positives = 26/45 (57%) Frame = -1 Query: 395 NSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSIPI 261 N++P+ KNR G PY LL P + G+T RGIPNSI I Sbjct: 858 NNNPENKNRCGAGIVPYELLKPFSE------PGVTGRGIPNSISI 896
>LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12)| (LOX-100) (LOX2:Hv:1) Length = 936 Score = 37.4 bits (85), Expect = 0.009 Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 4/49 (8%) Frame = -1 Query: 395 NSDPQLKNRTGPAKFPYMLLYPNTSDHTG----QAEGLTARGIPNSIPI 261 N+DP KNR G PY+LL P+ D T + + GIPNSI I Sbjct: 888 NNDPDRKNRHGAGMVPYVLLRPSDGDPTDGDPTDEKMVMEMGIPNSISI 936
>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)| Length = 918 Score = 36.6 bits (83), Expect = 0.015 Identities = 20/45 (44%), Positives = 25/45 (55%) Frame = -1 Query: 395 NSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSIPI 261 N+D KNR G PY LL P++ G+T RG+PNSI I Sbjct: 880 NADHGRKNRCGAGVLPYELLAPSS------PPGVTCRGVPNSISI 918
>LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1.13.11.12)| Length = 924 Score = 34.7 bits (78), Expect = 0.056 Identities = 19/45 (42%), Positives = 23/45 (51%) Frame = -1 Query: 395 NSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSIPI 261 N D +LKNR G PY L+ P + G+T GIPNS I Sbjct: 886 NKDRKLKNRCGAGILPYQLMKPFSD------SGVTGMGIPNSTSI 924
>LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precursor (EC| 1.13.11.12) Length = 941 Score = 34.3 bits (77), Expect = 0.073 Identities = 19/45 (42%), Positives = 23/45 (51%) Frame = -1 Query: 395 NSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSIPI 261 N D +LKNR G PY L+ P + G+T GIPNS I Sbjct: 903 NKDRKLKNRCGAGILPYQLMKPFSD------AGVTGMGIPNSTSI 941
>SYP_MYCTU (O05814) Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA| ligase) (ProRS) Length = 582 Score = 31.2 bits (69), Expect = 0.62 Identities = 20/40 (50%), Positives = 23/40 (57%) Frame = +3 Query: 240 TTDVLRSDGYAVRDAPGGEPLGLSRVVGGVWVEQHVWELG 359 T DVL DG VR G +G+SR+V V EQH ELG Sbjct: 438 TADVLGEDGKPVRLTMGSYGIGVSRLV-AVVAEQHHDELG 476
>LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:2) Length = 932 Score = 31.2 bits (69), Expect = 0.62 Identities = 18/45 (40%), Positives = 24/45 (53%) Frame = -1 Query: 395 NSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSIPI 261 N D +NR G PY+LL P + + A+ + GIPNSI I Sbjct: 889 NKDDSRRNRHGAGVVPYVLLRP-LNGNPMDAKTVMEMGIPNSISI 932
>SEPP1_PONPY (Q5R8W9) Selenoprotein P precursor (SeP)| Length = 381 Score = 30.4 bits (67), Expect = 1.1 Identities = 15/30 (50%), Positives = 16/30 (53%) Frame = -3 Query: 363 AGQVPIHAALPKHLRPHGTGRGAHRQGHPE 274 A P H A P L H +G HRQGHPE Sbjct: 231 APDAPTHPA-PPGLHHHHKHKGQHRQGHPE 259
>SEPP1_HUMAN (P49908) Selenoprotein P precursor (SeP)| Length = 381 Score = 30.4 bits (67), Expect = 1.1 Identities = 15/30 (50%), Positives = 16/30 (53%) Frame = -3 Query: 363 AGQVPIHAALPKHLRPHGTGRGAHRQGHPE 274 A P H A P L H +G HRQGHPE Sbjct: 231 APNAPTHPA-PPGLHHHHKHKGQHRQGHPE 259
>FOXJ3_MOUSE (Q8BUR3) Forkhead box protein J3| Length = 623 Score = 30.0 bits (66), Expect = 1.4 Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 4/47 (8%) Frame = -3 Query: 387 PAAQEPHRAGQVPIHAALPKHLRPHGTGRG----AHRQGHPEQHTHL 259 P+ PHR +P H P+H PH H Q HP H H+ Sbjct: 380 PSPHTPHRPHGLPQHPQRPQHPAPHPQQHSQLQPPHSQ-HPPPHQHI 425
>FRIZ3_DROME (O77438) Protein frizzled-3 precursor (dFz3)| Length = 581 Score = 30.0 bits (66), Expect = 1.4 Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 8/75 (10%) Frame = -1 Query: 344 MLLYPNTSDHTGQAEGLTARGIPNSIPI*SEHVRRRDLMLLC---YPCLLTPEL-----A 189 M PN + HT Q E I +P+ RR LLC +P L TP++ A Sbjct: 55 MTALPNLAGHTNQLEAELQ--IAKLVPLIESGCSRRARFLLCSSLFP-LCTPDVPRPVAA 111 Query: 188 CVCVCDRELCRCMNN 144 C +C+ CM N Sbjct: 112 CKLLCETVRGECMEN 126
>AFF3_HUMAN (P51826) AF4/FMR2 family member 3 (LAF-4 protein) (Lymphoid nuclear| protein related to AF4) Length = 1227 Score = 28.5 bits (62), Expect = 4.0 Identities = 17/51 (33%), Positives = 22/51 (43%) Frame = -1 Query: 359 AKFPYMLLYPNTSDHTGQAEGLTARGIPNSIPI*SEHVRRRDLMLLCYPCL 207 +K PY L+Y T + A L PN+ P + L LCY CL Sbjct: 1025 SKSPYYLMYSETVELIRYAMRLKTHSGPNATP------EDKQLAALCYRCL 1069
>NORR_SALTY (Q8ZMJ8) Anaerobic nitric oxide reductase transcription regulator| norR Length = 506 Score = 28.5 bits (62), Expect = 4.0 Identities = 15/33 (45%), Positives = 18/33 (54%) Frame = +3 Query: 300 LGLSRVVGGVWVEQHVWELGRPGAVLELRVRVH 398 LGLSRVV +H+ G PG V EL +H Sbjct: 380 LGLSRVVLSPGARRHLLNYGWPGNVRELEHAIH 412
>NORR_SALTI (Q8Z4C6) Anaerobic nitric oxide reductase transcription regulator| norR Length = 506 Score = 28.5 bits (62), Expect = 4.0 Identities = 15/33 (45%), Positives = 18/33 (54%) Frame = +3 Query: 300 LGLSRVVGGVWVEQHVWELGRPGAVLELRVRVH 398 LGLSRVV +H+ G PG V EL +H Sbjct: 380 LGLSRVVLSPGARRHLLNYGWPGNVRELEHAIH 412
>ALR1_SALTY (P0A1A3) Alanine racemase, biosynthetic (EC 5.1.1.1)| Length = 359 Score = 28.1 bits (61), Expect = 5.2 Identities = 16/36 (44%), Positives = 18/36 (50%) Frame = +3 Query: 252 LRSDGYAVRDAPGGEPLGLSRVVGGVWVEQHVWELG 359 L S AVRD GEP+G GG WV + LG Sbjct: 237 LTSSLIAVRDHKAGEPVG----YGGTWVSERDTRLG 268
>ALR1_SALTI (P0A1A4) Alanine racemase, biosynthetic (EC 5.1.1.1)| Length = 359 Score = 28.1 bits (61), Expect = 5.2 Identities = 16/36 (44%), Positives = 18/36 (50%) Frame = +3 Query: 252 LRSDGYAVRDAPGGEPLGLSRVVGGVWVEQHVWELG 359 L S AVRD GEP+G GG WV + LG Sbjct: 237 LTSSLIAVRDHKAGEPVG----YGGTWVSERDTRLG 268
>CREB5_HUMAN (Q02930) cAMP response element-binding protein 5 (CRE-BPa)| Length = 508 Score = 28.1 bits (61), Expect = 5.2 Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 3/40 (7%) Frame = -3 Query: 372 PHRAGQVPIHAALP---KHLRPHGTGRGAHRQGHPEQHTH 262 PH+ +P H P +H H + H+Q HP H+H Sbjct: 278 PHQHQTLPPHHPYPHQHQHPAHHPHPQPHHQQNHPHHHSH 317
>NOTC2_MOUSE (O35516) Neurogenic locus notch homolog protein 2 precursor (Notch| 2) (Motch B) [Contains: Notch 2 extracellular truncation; Notch 2 intracellular domain] Length = 2470 Score = 28.1 bits (61), Expect = 5.2 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 7/53 (13%) Frame = -1 Query: 188 CVCV-------CDRELCRCMNN*GNKGACTTGLIGMRKLSSAGYRSMHRRVQK 51 C+C C ++ C++N G CT GL G + L AG+ ++ V K Sbjct: 704 CICPEGPHHPSCYSQVNECLSNPCIHGNCTGGLSGYKCLCDAGWVGVNCEVDK 756
>CREB5_MOUSE (Q8K1L0) cAMP response element-binding protein 5 (CRE-BPa)| (Fragment) Length = 353 Score = 28.1 bits (61), Expect = 5.2 Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 3/40 (7%) Frame = -3 Query: 372 PHRAGQVPIHAALP---KHLRPHGTGRGAHRQGHPEQHTH 262 PH+ +P H P +H H + H+Q HP H+H Sbjct: 123 PHQHQTLPPHHPYPHQHQHPAHHPHPQPHHQQNHPHHHSH 162
>NOTC2_HUMAN (Q04721) Neurogenic locus notch homolog protein 2 precursor (Notch| 2) (hN2) [Contains: Notch 2 extracellular truncation; Notch 2 intracellular domain] Length = 2471 Score = 28.1 bits (61), Expect = 5.2 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 7/53 (13%) Frame = -1 Query: 188 CVCV-------CDRELCRCMNN*GNKGACTTGLIGMRKLSSAGYRSMHRRVQK 51 C+C C ++ C++N G CT GL G + L AG+ ++ V K Sbjct: 706 CICPEGPHHPSCYSQVNECLSNPCIHGNCTGGLSGYKCLCDAGWVGINCEVDK 758
>GOR_PANTR (P48778) Exonuclease GOR (EC 3.1.-.-) (Antigen GOR) (RNA| exonuclease 1 homolog-like) Length = 427 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = -2 Query: 391 RTRSSRTAPGRPSSHTCCS 335 R RSS+ A GR S +TCC+ Sbjct: 84 RVRSSQVAGGRVSQYTCCA 102
>GOR_HUMAN (Q8IX06) Exonuclease GOR (EC 3.1.-.-) (Antigen GOR) (RNA| exonuclease 1 homolog-like) Length = 318 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = -2 Query: 391 RTRSSRTAPGRPSSHTCCS 335 R RSS+ A GR S +TCC+ Sbjct: 84 RVRSSQVAGGRVSQYTCCA 102
>ANTP_DROME (P02833) Homeotic protein antennapedia| Length = 378 Score = 27.7 bits (60), Expect = 6.8 Identities = 19/58 (32%), Positives = 25/58 (43%) Frame = -3 Query: 399 HELGPAAQEPHRAGQVPIHAALPKHLRPHGTGRGAHRQGHPEQHTHLI*ARPSSRPHA 226 H +G Q+ VP A P+ + G G QGHP QHT PS P++ Sbjct: 226 HNMGMYQQQ----SGVPPVGAPPQGMMHQGQGPPQMHQGHPGQHT-----PPSQNPNS 274
>KPTA_BURS3 (Q395F2) Probable RNA 2'-phosphotransferase (EC 2.7.-.-)| Length = 194 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = +3 Query: 93 ELPHADQTRRARTLIALIIHAPAQLSV 173 ELP D TR +RTL L+ HAP + + Sbjct: 7 ELPAPDATRISRTLSYLLRHAPQTIGL 33
>YTRP_PSEPU (P40604) Hypothetical 62.7 kDa protein in trpE-trpG intergenic| region precursor Length = 592 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/43 (30%), Positives = 18/43 (41%) Frame = +3 Query: 276 RDAPGGEPLGLSRVVGGVWVEQHVWELGRPGAVLELRVRVHGH 404 R G+ G + VGG + W LG G V ++ GH Sbjct: 368 RAGASGDGRGYNLTVGGSYRLNDAWRLGLAGGVYRQKLEAGGH 410
>TBX1_MOUSE (P70323) T-box transcription factor TBX1 (T-box protein 1)| (Testis-specific T-box protein) Length = 479 Score = 27.3 bits (59), Expect = 8.9 Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 1/43 (2%) Frame = -3 Query: 387 PAAQEPHRAGQVPIHAALP-KHLRPHGTGRGAHRQGHPEQHTH 262 PAA H G A P LR HG AH HP H H Sbjct: 404 PAAAYDHYLGAKSRPAPYPLPGLRGHGYHPHAHPHAHPHHHHH 446
>ITR1_ASCSU (P19398) Trypsin inhibitor (ATI)| Length = 62 Score = 27.3 bits (59), Expect = 8.9 Identities = 10/23 (43%), Positives = 12/23 (52%) Frame = +2 Query: 260 RWVCCSGCPWR*APRPVPCGRRC 328 +W C GC A + VPC R C Sbjct: 11 QWTKCGGCEGTCAQKIVPCTREC 33
>THII_HALSA (Q9HQ72) Probable thiamine biosynthesis protein thiI| Length = 392 Score = 27.3 bits (59), Expect = 8.9 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 5/37 (13%) Frame = +3 Query: 276 RDAPGGEPLG-----LSRVVGGVWVEQHVWELGRPGA 371 RD PGG PLG ++ V GG+ WE R GA Sbjct: 170 RDGPGGMPLGTQQPLVALVSGGIDSPVAAWESMRRGA 206
>CAUP_DROME (P54269) Homeobox protein caupolican| Length = 693 Score = 27.3 bits (59), Expect = 8.9 Identities = 16/44 (36%), Positives = 20/44 (45%) Frame = -3 Query: 393 LGPAAQEPHRAGQVPIHAALPKHLRPHGTGRGAHRQGHPEQHTH 262 L P A P G P+HAA + + H T H HP+Q H Sbjct: 367 LAPYATPP---GAHPMHAAYSSYAQSHNT----HTHPHPQQMQH 403 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,866,364 Number of Sequences: 219361 Number of extensions: 1363112 Number of successful extensions: 3767 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 3596 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3740 length of database: 80,573,946 effective HSP length: 110 effective length of database: 56,444,236 effective search space used: 1354661664 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
