ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl27e05 |
|---|---|
| Clone Library Name | barley_pub |
>CLPB2_ANASP (Q8YM56) Chaperone clpB 2| Length = 872 Score = 42.0 bits (97), Expect = 3e-04 Identities = 21/43 (48%), Positives = 29/43 (67%) Frame = -2 Query: 407 VKRVLQQYVENELAKGILRGEFKDEDSISVDTQVTVPSNGQLP 279 +KR +Q+ +E ++AK ILRGEF D D+I VD Q S +LP Sbjct: 824 LKRAIQRELETQIAKAILRGEFNDGDTIFVDVQNERLSFSRLP 866
>CLPB_BRAJA (Q89UL2) Chaperone clpB| Length = 879 Score = 39.3 bits (90), Expect = 0.002 Identities = 18/45 (40%), Positives = 34/45 (75%), Gaps = 1/45 (2%) Frame = -2 Query: 407 VKRVLQQYVENELAKGILRGEFKDEDSISVDTQVTVPS-NGQLPQ 276 +KRV+Q+Y+++ LA+ IL G+ KD D++++ ++ V + NG+ PQ Sbjct: 818 LKRVIQRYLQDPLAEMILAGDVKDGDNVAISSEGNVLTFNGKAPQ 862
>CLPB2_SYNY3 (P74361) Chaperone clpB 2| Length = 872 Score = 38.5 bits (88), Expect = 0.004 Identities = 16/31 (51%), Positives = 25/31 (80%) Frame = -2 Query: 407 VKRVLQQYVENELAKGILRGEFKDEDSISVD 315 +KR +Q+Y+E +AKGILRG++K ++I VD Sbjct: 824 LKRAVQKYLETAIAKGILRGDYKPGETIVVD 854
>CLPB1_SYNP7 (P53533) Chaperone clpB 1| Length = 874 Score = 36.6 bits (83), Expect = 0.015 Identities = 16/30 (53%), Positives = 23/30 (76%) Frame = -2 Query: 407 VKRVLQQYVENELAKGILRGEFKDEDSISV 318 +KRV+Q+ +E +AK ILRG+F D D+I V Sbjct: 824 LKRVIQRELETAIAKAILRGQFSDGDTIQV 853
>CLPB_AQUAE (O67588) Chaperone clpB| Length = 1006 Score = 36.6 bits (83), Expect = 0.015 Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 4/61 (6%) Frame = -2 Query: 407 VKRVLQQYVENELAKGILRGEFKDEDSISVDTQ----VTVPSNGQLPQQKLVFRKMNEES 240 +KR +Q+YVE LA I+RGE KD ++ VD + V +P + +QK +EE Sbjct: 945 LKRTIQKYVETPLADKIIRGEIKDGMTVVVDYKDGEFVFIPKE-EYEKQKAEVSASSEEK 1003 Query: 239 K 237 K Sbjct: 1004 K 1004
>CLPB_GLOVI (Q7NFE9) Chaperone clpB| Length = 872 Score = 36.2 bits (82), Expect = 0.019 Identities = 15/33 (45%), Positives = 24/33 (72%) Frame = -2 Query: 407 VKRVLQQYVENELAKGILRGEFKDEDSISVDTQ 309 +KR +Q + N LA+G+L+G+F D D+I VD + Sbjct: 825 LKRAIQNELVNPLARGLLKGDFNDGDTIFVDIE 857
>CLPB1_SYNEL (Q8DJ40) Chaperone clpB 1| Length = 871 Score = 35.8 bits (81), Expect = 0.025 Identities = 16/31 (51%), Positives = 23/31 (74%) Frame = -2 Query: 407 VKRVLQQYVENELAKGILRGEFKDEDSISVD 315 +KR +Q+ +E +AK ILRG+F D D+I VD Sbjct: 823 LKRAIQKQLETPIAKAILRGDFFDGDTILVD 853
>CLPB_BORPE (Q7VYV6) Chaperone clpB| Length = 865 Score = 33.5 bits (75), Expect = 0.12 Identities = 16/33 (48%), Positives = 21/33 (63%) Frame = -2 Query: 407 VKRVLQQYVENELAKGILRGEFKDEDSISVDTQ 309 +KR +QQ +EN +AK IL G F D + VD Q Sbjct: 822 LKRAIQQQIENPVAKLILEGVFGPRDVVPVDWQ 854
>CLPB_BORBR (Q7WHB6) Chaperone clpB| Length = 865 Score = 33.5 bits (75), Expect = 0.12 Identities = 16/33 (48%), Positives = 21/33 (63%) Frame = -2 Query: 407 VKRVLQQYVENELAKGILRGEFKDEDSISVDTQ 309 +KR +QQ +EN +AK IL G F D + VD Q Sbjct: 822 LKRAIQQQIENPVAKLILEGVFGPRDVVPVDWQ 854
>CLPB_BLOFL (Q7VQF3) Chaperone clpB| Length = 872 Score = 33.1 bits (74), Expect = 0.16 Identities = 14/33 (42%), Positives = 23/33 (69%) Frame = -2 Query: 407 VKRVLQQYVENELAKGILRGEFKDEDSISVDTQ 309 +KR++QQY+EN L++ IL + SI++D Q Sbjct: 820 LKRIIQQYIENPLSQKILSDDLLPGRSITIDVQ 852
>CLPB_RALSO (Q8XZR0) Chaperone clpB| Length = 862 Score = 33.1 bits (74), Expect = 0.16 Identities = 14/31 (45%), Positives = 21/31 (67%) Frame = -2 Query: 407 VKRVLQQYVENELAKGILRGEFKDEDSISVD 315 +KR +QQ +EN +A+ IL G F +D + VD Sbjct: 819 LKRAIQQQIENPVARMILEGRFTPKDVVPVD 849
>CLPB_RHIME (Q92MK7) Chaperone clpB| Length = 868 Score = 32.7 bits (73), Expect = 0.21 Identities = 14/30 (46%), Positives = 22/30 (73%) Frame = -2 Query: 407 VKRVLQQYVENELAKGILRGEFKDEDSISV 318 +KR +Q+YV++ LA+ +L+GEF D I V Sbjct: 819 LKRAIQKYVQDPLAEKVLQGEFPDGSVIKV 848
>CLPB_COREF (Q8FM94) Chaperone clpB| Length = 852 Score = 32.3 bits (72), Expect = 0.28 Identities = 13/31 (41%), Positives = 23/31 (74%) Frame = -2 Query: 407 VKRVLQQYVENELAKGILRGEFKDEDSISVD 315 ++R++QQ + ++LAK +L GE +D D + VD Sbjct: 808 LRRLIQQAIGDQLAKELLAGEIRDGDRVLVD 838
>CLPB_BACNO (P17422) Chaperone clpB| Length = 860 Score = 32.0 bits (71), Expect = 0.36 Identities = 11/30 (36%), Positives = 22/30 (73%) Frame = -2 Query: 407 VKRVLQQYVENELAKGILRGEFKDEDSISV 318 +KR +Q Y+EN LA+ +L G++ + +I++ Sbjct: 821 LKRAIQNYIENPLAQALLAGQYLPQSTITI 850
>PANE1_MOUSE (Q9CQA0) Proliferation-associated nuclear element protein 1| Length = 180 Score = 32.0 bits (71), Expect = 0.36 Identities = 19/68 (27%), Positives = 36/68 (52%) Frame = -2 Query: 374 ELAKGILRGEFKDEDSISVDTQVTVPSNGQLPQQKLVFRKMNEESKPAAAQDEKFLPTV* 195 +LA+ +L+ + E + + + +PSN P+ L+ +N SK + + E+FL V Sbjct: 30 QLAESMLKDDCASELRVHLANSLPLPSNVNRPRIDLIVFVINLHSKYSLQKVEEFLQHVD 89 Query: 194 CSIFLQRI 171 S FL ++ Sbjct: 90 SSFFLGKV 97
>CLPB_NITEU (Q82SD8) Chaperone clpB| Length = 863 Score = 31.2 bits (69), Expect = 0.61 Identities = 14/31 (45%), Positives = 20/31 (64%) Frame = -2 Query: 407 VKRVLQQYVENELAKGILRGEFKDEDSISVD 315 +KR +Q +EN LAK +L G F D+I V+ Sbjct: 821 LKRAIQAQIENPLAKELLEGHFSAGDTILVE 851
>CLPB_TREDE (Q73K92) Chaperone clpB| Length = 859 Score = 30.8 bits (68), Expect = 0.80 Identities = 13/31 (41%), Positives = 22/31 (70%) Frame = -2 Query: 407 VKRVLQQYVENELAKGILRGEFKDEDSISVD 315 +KR +Q +EN+LA+ +L G+F + +I VD Sbjct: 818 LKRAIQAELENKLAREVLEGKFPEGSTILVD 848
>CLPB_NEIMB (Q9JYQ8) Chaperone clpB| Length = 859 Score = 30.8 bits (68), Expect = 0.80 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = -2 Query: 407 VKRVLQQYVENELAKGILRGEFKDEDSISVD 315 +KR +Q +EN LAK +L G + E I V+ Sbjct: 820 LKRAIQSEIENPLAKALLAGNYAPESEIRVE 850
>CLPB_NEIMA (Q9JTP9) Chaperone clpB| Length = 859 Score = 30.8 bits (68), Expect = 0.80 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = -2 Query: 407 VKRVLQQYVENELAKGILRGEFKDEDSISVD 315 +KR +Q +EN LAK +L G + E I V+ Sbjct: 820 LKRAIQSEIENPLAKALLAGNYAPESEIRVE 850
>CLPB_CHRVO (Q7NWN7) Chaperone clpB| Length = 859 Score = 30.8 bits (68), Expect = 0.80 Identities = 16/42 (38%), Positives = 26/42 (61%) Frame = -2 Query: 407 VKRVLQQYVENELAKGILRGEFKDEDSISVDTQVTVPSNGQL 282 +KR +Q +EN LAK IL G++ + ++ V+ + NGQL Sbjct: 820 LKRAIQAELENPLAKAILAGKYPPKATVMVEAR-----NGQL 856
>CLPB_VIBPA (Q87S63) Chaperone clpB| Length = 857 Score = 30.8 bits (68), Expect = 0.80 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = -2 Query: 407 VKRVLQQYVENELAKGILRGEFKDEDSISV 318 +KR +QQ VEN LAK IL GE + + + Sbjct: 817 LKRAIQQNVENPLAKSILAGEIVPDKKVQL 846
>CLPB_VIBCH (Q9KU18) Chaperone clpB| Length = 857 Score = 30.8 bits (68), Expect = 0.80 Identities = 14/22 (63%), Positives = 17/22 (77%) Frame = -2 Query: 407 VKRVLQQYVENELAKGILRGEF 342 +KR +QQ VEN LAK IL G+F Sbjct: 817 LKRAIQQNVENPLAKSILAGKF 838
>CLPB_CORDI (Q6NF05) Chaperone clpB| Length = 849 Score = 30.8 bits (68), Expect = 0.80 Identities = 12/34 (35%), Positives = 23/34 (67%) Frame = -2 Query: 407 VKRVLQQYVENELAKGILRGEFKDEDSISVDTQV 306 ++R++QQ + ++LAK +L GE +D + VD + Sbjct: 806 LRRLIQQAIGDQLAKKLLSGEVRDGSEVHVDADL 839
>CLPB_XANAC (Q8PHQ4) Chaperone clpB| Length = 861 Score = 30.8 bits (68), Expect = 0.80 Identities = 14/30 (46%), Positives = 20/30 (66%) Frame = -2 Query: 407 VKRVLQQYVENELAKGILRGEFKDEDSISV 318 +KR +Q VEN LA+ IL G++ DS+ V Sbjct: 820 LKRAIQSQVENPLAQQILSGQYLSGDSVRV 849
>CLPB_WOLPM (Q73IE4) Chaperone clpB| Length = 853 Score = 30.8 bits (68), Expect = 0.80 Identities = 13/30 (43%), Positives = 21/30 (70%) Frame = -2 Query: 407 VKRVLQQYVENELAKGILRGEFKDEDSISV 318 +KRV+Q+ ++N LAK +L GE + D + V Sbjct: 812 LKRVIQECIQNNLAKLVLSGEVVENDELIV 841
>CLPB_COXBU (Q83F55) Chaperone clpB| Length = 859 Score = 30.4 bits (67), Expect = 1.0 Identities = 14/31 (45%), Positives = 22/31 (70%) Frame = -2 Query: 407 VKRVLQQYVENELAKGILRGEFKDEDSISVD 315 +KRVLQQ +EN L++ IL G+F I+++ Sbjct: 818 LKRVLQQQLENPLSQKILEGKFVPGSLINIE 848
>FBLN1_CERAE (Q8MJJ9) Fibulin-1 (Fragment)| Length = 598 Score = 30.0 bits (66), Expect = 1.4 Identities = 21/53 (39%), Positives = 22/53 (41%), Gaps = 5/53 (9%) Frame = -1 Query: 408 SEASAPAVRGE---RTGQGYPQRRVQ--GRGQHLRRHSGDGAVERTAPPAEAC 265 S SAP G T Y Q+ V GRG HL V APPAE C Sbjct: 230 SIVSAPCPTGHTCINTEGSYTQKNVPNCGRGYHLNEEGTRCDVNECAPPAEPC 282
>CLPB_PSEAE (Q9HVN5) Chaperone clpB| Length = 854 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/33 (42%), Positives = 22/33 (66%) Frame = -2 Query: 407 VKRVLQQYVENELAKGILRGEFKDEDSISVDTQ 309 +KR +Q+++EN LA+ IL G+F SIS + Sbjct: 815 LKRAIQRWIENPLAQLILAGKFAPGASISAKVE 847
>PERQ1_MOUSE (Q99MR1) PERQ amino acid rich with GYF domain protein 1| Length = 1011 Score = 30.0 bits (66), Expect = 1.4 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Frame = -1 Query: 387 VRGERTGQGYPQRRVQGRGQHLRRHSG-DGAVERTAPPAEACLPEDE 250 +RGER G G RV G HLRR G DG + E CL +++ Sbjct: 222 LRGERGGCGEEDGRVGGGNSHLRRCRGLDGFEDDKDGLPEWCLEDED 268
>CLPB_PHOPR (Q6LMY0) Chaperone clpB| Length = 857 Score = 29.6 bits (65), Expect = 1.8 Identities = 12/23 (52%), Positives = 18/23 (78%) Frame = -2 Query: 407 VKRVLQQYVENELAKGILRGEFK 339 +KR +QQY+EN LA+ IL G+ + Sbjct: 817 LKRAIQQYIENPLAQEILSGKLE 839
>CLPB_RHOBA (Q7UM33) Chaperone clpB| Length = 881 Score = 29.6 bits (65), Expect = 1.8 Identities = 12/31 (38%), Positives = 21/31 (67%) Frame = -2 Query: 407 VKRVLQQYVENELAKGILRGEFKDEDSISVD 315 +KRV+Q+ V+N LA IL+ + + +I +D Sbjct: 841 LKRVIQREVQNPLASAILKNSYAEGTTIKID 871
>VMTM_LAMBD (P03737) Minor tail protein M| Length = 109 Score = 29.6 bits (65), Expect = 1.8 Identities = 19/49 (38%), Positives = 25/49 (51%) Frame = -1 Query: 402 ASAPAVRGERTGQGYPQRRVQGRGQHLRRHSGDGAVERTAPPAEACLPE 256 AS P+VR R G GY QR G +L+ +S V + P EA + E Sbjct: 15 ASVPSVRKVRFGDGYSQRAPAGLNANLKTYS----VTLSVPREEATVLE 59
>CLPB_TREPA (O83110) Chaperone clpB| Length = 878 Score = 29.6 bits (65), Expect = 1.8 Identities = 14/31 (45%), Positives = 20/31 (64%) Frame = -2 Query: 407 VKRVLQQYVENELAKGILRGEFKDEDSISVD 315 +KR +Q +EN LA+ IL G F+ +I VD Sbjct: 835 LKRAIQTELENALAREILSGRFRGGSTIVVD 865
>K0841_MOUSE (Q9D786) Protein KIAA0841| Length = 619 Score = 29.3 bits (64), Expect = 2.3 Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 4/68 (5%) Frame = -1 Query: 405 EASAPAVRGERTGQGYPQRRVQGRGQHLRRHSGDGAVERTAPP----AEACLPEDERGIQ 238 +A A AVR ++ G P +R+Q + +HL+ V+ T P A A PE ++ Sbjct: 130 QAQAGAVRRQQRGLQDPMQRLQNQLKHLQDMQRKAKVDVTFGPVVSAAPALEPEVLGDVR 189 Query: 237 AGCCSRRE 214 A C R + Sbjct: 190 AACTLRTQ 197
>CLPB_CORGL (P53532) Chaperone clpB| Length = 852 Score = 29.3 bits (64), Expect = 2.3 Identities = 12/31 (38%), Positives = 21/31 (67%) Frame = -2 Query: 407 VKRVLQQYVENELAKGILRGEFKDEDSISVD 315 ++R++QQ + + LAK +L G +D D + VD Sbjct: 808 LRRLIQQAIGDTLAKELLAGNVRDGDGVLVD 838
>ELOA3_HUMAN (Q8NG57) RNA polymerase II transcription factor SIII subunit A3| (Elongin A3) (EloA3) (Transcription elongation factor B polypeptide 3C) Length = 546 Score = 29.3 bits (64), Expect = 2.3 Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 16/93 (17%) Frame = -1 Query: 405 EASAPAVRGERTGQGYP-------------QRRVQGR--GQHLRRH-SGDGAVERTAPPA 274 E PAV GE+ G+G+ Q + QG G H + H S GA + +PP Sbjct: 182 EGPEPAVPGEQPGRGHAHAAQGGPLLGQGCQGQPQGEAVGSHSKGHKSSRGASAQKSPPV 241 Query: 273 EACLPEDERGIQAGCCSRREVPADSLMLHIFAE 175 + E + A + VP+ H+F+E Sbjct: 242 QESQSERLQAAGADSAGPKTVPS-----HVFSE 269
>CLPB_HAEDU (Q7VNH1) Chaperone clpB| Length = 856 Score = 28.9 bits (63), Expect = 3.0 Identities = 13/33 (39%), Positives = 21/33 (63%) Frame = -2 Query: 407 VKRVLQQYVENELAKGILRGEFKDEDSISVDTQ 309 +KR +QQ +EN LA+ IL G+ + + +D Q Sbjct: 816 LKRAIQQELENPLAQQILSGKLLPNNPVIIDYQ 848
>CLPB_PASMU (Q9CKC0) Chaperone clpB| Length = 855 Score = 28.9 bits (63), Expect = 3.0 Identities = 12/31 (38%), Positives = 20/31 (64%) Frame = -2 Query: 407 VKRVLQQYVENELAKGILRGEFKDEDSISVD 315 +KR +QQ +EN LA+ IL G+ +++D Sbjct: 815 LKRAIQQEIENPLAQQILSGKLLPNQLVTID 845
>CLPB_VIBVY (Q7MNK1) Chaperone clpB| Length = 857 Score = 28.5 bits (62), Expect = 4.0 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = -2 Query: 407 VKRVLQQYVENELAKGILRGEFKDEDSISV 318 +KR +QQ +EN LAK IL G + I + Sbjct: 817 LKRAIQQSIENPLAKSILAGSVLPDKKIQL 846
>CLPB_VIBVU (Q8DEV2) Chaperone clpB| Length = 857 Score = 28.5 bits (62), Expect = 4.0 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = -2 Query: 407 VKRVLQQYVENELAKGILRGEFKDEDSISV 318 +KR +QQ +EN LAK IL G + I + Sbjct: 817 LKRAIQQSIENPLAKSILAGSVLPDKKIQL 846
>CLPB_PHOLL (Q7N788) Chaperone clpB| Length = 857 Score = 28.5 bits (62), Expect = 4.0 Identities = 12/33 (36%), Positives = 21/33 (63%) Frame = -2 Query: 407 VKRVLQQYVENELAKGILRGEFKDEDSISVDTQ 309 +KR +QQ +EN LA+ IL G+ +++D + Sbjct: 817 LKRAIQQEIENPLAQKILSGQLLPGKPVTLDVE 849
>ABLM2_HUMAN (Q6H8Q1) Actin-binding LIM protein 2 (Actin-binding LIM protein| family member 2) (abLIM2) Length = 611 Score = 28.5 bits (62), Expect = 4.0 Identities = 20/59 (33%), Positives = 26/59 (44%) Frame = -1 Query: 177 EDRSINKCRYI*GRRTGSVSLWAYHSRVMQPEFFAPAVHY*QQDNPKKPEVLDDSDIPP 1 +DRS +CR TGSVSL Y P+ ++ + P VL DS PP Sbjct: 353 DDRSYKQCRTSSPSSTGSVSLGRYTPTSRSPQHYSRPGSESGRSTPSL-SVLSDSKPPP 410
>CLPB_CHLPN (Q7AJA9) Chaperone clpB| Length = 866 Score = 28.5 bits (62), Expect = 4.0 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = -2 Query: 407 VKRVLQQYVENELAKGILRGEFKDEDSISVDTQVTVPSNGQLPQQKLVFRKMNEES 240 +KR++QQ V L+K +L+G+ K + SI + + ++ LVF+K+ S Sbjct: 821 LKRLIQQKVVILLSKALLKGDIKPDTSIEL----------TMAKEVLVFKKVETPS 866
>Y344_MYCPN (P75434) Hypothetical UPF0134 protein MPN344 (H91_orf216)| Length = 216 Score = 28.5 bits (62), Expect = 4.0 Identities = 12/17 (70%), Positives = 12/17 (70%) Frame = -1 Query: 54 QQDNPKKPEVLDDSDIP 4 QQD P KPE LD DIP Sbjct: 53 QQDRPDKPEELDTPDIP 69
>CLPB_CHLCV (Q822Q4) Chaperone clpB| Length = 864 Score = 28.5 bits (62), Expect = 4.0 Identities = 12/30 (40%), Positives = 21/30 (70%) Frame = -2 Query: 407 VKRVLQQYVENELAKGILRGEFKDEDSISV 318 +KR++QQ V L+K +L+G+ K + SI + Sbjct: 821 LKRLIQQKVVTLLSKALLKGDIKSDTSIEL 850
>CLPB_SHEON (Q8EBE6) Chaperone clpB| Length = 857 Score = 28.1 bits (61), Expect = 5.2 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = -2 Query: 407 VKRVLQQYVENELAKGILRGEFKDEDSISV 318 +KR LQQ +EN LA+ +LRG+ I V Sbjct: 817 LKRALQQEMENPLAQKLLRGDLLPGKPIKV 846
>CLPB_SHIFL (Q7UBW5) Chaperone clpB| Length = 857 Score = 27.7 bits (60), Expect = 6.8 Identities = 12/21 (57%), Positives = 16/21 (76%) Frame = -2 Query: 407 VKRVLQQYVENELAKGILRGE 345 +KR +QQ +EN LA+ IL GE Sbjct: 817 LKRAIQQQIENPLAQQILSGE 837
>CLPB_SALTY (Q7CQ01) Chaperone clpB| Length = 857 Score = 27.7 bits (60), Expect = 6.8 Identities = 12/21 (57%), Positives = 16/21 (76%) Frame = -2 Query: 407 VKRVLQQYVENELAKGILRGE 345 +KR +QQ +EN LA+ IL GE Sbjct: 817 LKRAIQQQIENPLAQQILSGE 837
>CLPB_SALTI (Q7AMH5) Chaperone clpB| Length = 857 Score = 27.7 bits (60), Expect = 6.8 Identities = 12/21 (57%), Positives = 16/21 (76%) Frame = -2 Query: 407 VKRVLQQYVENELAKGILRGE 345 +KR +QQ +EN LA+ IL GE Sbjct: 817 LKRAIQQQIENPLAQQILSGE 837
>CLPB_ECOLI (P63284) Chaperone clpB (Heat-shock protein F84.1)| Length = 857 Score = 27.7 bits (60), Expect = 6.8 Identities = 12/21 (57%), Positives = 16/21 (76%) Frame = -2 Query: 407 VKRVLQQYVENELAKGILRGE 345 +KR +QQ +EN LA+ IL GE Sbjct: 817 LKRAIQQQIENPLAQQILSGE 837
>CLPB_ECOL6 (P63286) Chaperone clpB| Length = 857 Score = 27.7 bits (60), Expect = 6.8 Identities = 12/21 (57%), Positives = 16/21 (76%) Frame = -2 Query: 407 VKRVLQQYVENELAKGILRGE 345 +KR +QQ +EN LA+ IL GE Sbjct: 817 LKRAIQQQIENPLAQQILSGE 837
>CLPB_ECO57 (P63285) Chaperone clpB| Length = 857 Score = 27.7 bits (60), Expect = 6.8 Identities = 12/21 (57%), Positives = 16/21 (76%) Frame = -2 Query: 407 VKRVLQQYVENELAKGILRGE 345 +KR +QQ +EN LA+ IL GE Sbjct: 817 LKRAIQQQIENPLAQQILSGE 837
>CLPB_PSEPK (Q88Q71) Chaperone clpB| Length = 854 Score = 27.7 bits (60), Expect = 6.8 Identities = 12/33 (36%), Positives = 22/33 (66%) Frame = -2 Query: 407 VKRVLQQYVENELAKGILRGEFKDEDSISVDTQ 309 +KR +Q+++EN LA+ IL G+F +I+ + Sbjct: 815 LKRAIQRWIENPLAQLILAGKFLPGTAITAKVE 847
>SREC2_HUMAN (Q96GP6) Scavenger receptor class F member 2 precursor (Scavenger| receptor expressed by endothelial cells 2 protein) (SREC-II) (SRECRP-1) Length = 866 Score = 27.7 bits (60), Expect = 6.8 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 9/60 (15%) Frame = -1 Query: 357 PQRRVQGRGQHLRRHSGDGAVERTAPPAEACLPEDERG---------IQAGCCSRREVPA 205 P+ R +GRG L + G R+AP A + L + RG + G RE PA Sbjct: 739 PRARARGRGPGLLEPTDAGGPPRSAPEAASMLAAELRGKTRSLGRAEVALGAQGPREKPA 798
>NIT1_HUMAN (Q86X76) Nitrilase homolog 1 (EC 3.5.-.-)| Length = 327 Score = 27.7 bits (60), Expect = 6.8 Identities = 15/50 (30%), Positives = 21/50 (42%) Frame = +1 Query: 256 FRKTSFCWGSCPFDGTVT*VSTEMLSSSLNSPLRIPLASSFSTYCWSTRF 405 +RKT C P G + ++ M SL SP+ P C+ RF Sbjct: 159 YRKTHLCDVEIPGQGPMCESNSTMPGPSLESPVSTPAGKIGLAVCYDMRF 208
>BGAL_SULSH (P50388) Beta-galactosidase (EC 3.2.1.23) (Lactase)| Length = 489 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/38 (34%), Positives = 20/38 (52%) Frame = +1 Query: 43 VVLLLIMYCWSKEFWLHNPAMICPKRYTTSSPPLYVST 156 + +L MY W WLH+P + +R S P ++ST Sbjct: 142 IYFILNMYHWPLPLWLHDPIRV--RRGDLSGPTGWLST 177
>CLPB_BACTN (Q89YY3) Chaperone clpB| Length = 862 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/32 (40%), Positives = 21/32 (65%) Frame = -2 Query: 407 VKRVLQQYVENELAKGILRGEFKDEDSISVDT 312 VKR +Q+Y+ N+L+K +L E +I VD+ Sbjct: 822 VKRAIQRYLLNDLSKKLLSQEVDRSKAIIVDS 853
>CLPB_PORGI (Q7MVE7) Chaperone clpB| Length = 863 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = -2 Query: 407 VKRVLQQYVENELAKGILRGEFKDEDSISVD 315 VKRVLQ++V NEL+K +L + +D Sbjct: 822 VKRVLQRFVLNELSKALLADTVDSTRPVLID 852
>ADA2B_DUGDU (O77713) Alpha-2B adrenergic receptor (Alpha-2B adrenoceptor)| (Alpha-2B adrenoreceptor) (Fragment) Length = 390 Score = 27.3 bits (59), Expect = 8.9 Identities = 20/59 (33%), Positives = 25/59 (42%) Frame = -1 Query: 402 ASAPAVRGERTGQGYPQRRVQGRGQHLRRHSGDGAVERTAPPAEACLPEDERGIQAGCC 226 AS+ AV GE G P G+ R S D T PP+ LP +G + G C Sbjct: 225 ASSLAVAGEANGHSMPP------GEKERETSEDPGTP-TLPPSWPVLPNSGQGQKGGVC 276
>ORYB_ORYSA (P25777) Oryzain beta chain precursor (EC 3.4.22.-)| Length = 471 Score = 27.3 bits (59), Expect = 8.9 Identities = 12/30 (40%), Positives = 15/30 (50%) Frame = +1 Query: 211 NFSS*AAAGLDSSFIFRKTSFCWGSCPFDG 300 NFS A + +F FR WG CP +G Sbjct: 388 NFSCPAGSTCCCAFGFRNLCLVWGCCPVEG 417
>CLPB_HAEIN (P44403) Chaperone clpB| Length = 856 Score = 27.3 bits (59), Expect = 8.9 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = -2 Query: 407 VKRVLQQYVENELAKGILRGEFKDEDSISVD 315 +KR +QQ +EN LA+ IL G +++D Sbjct: 816 LKRAIQQEIENSLAQQILSGALLPGKVVTID 846
>TEP1_HUMAN (Q99973) Telomerase protein component 1 (Telomerase-associated| protein 1) (Telomerase protein 1) (p240) (p80 telomerase homolog) Length = 2627 Score = 27.3 bits (59), Expect = 8.9 Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 1/73 (1%) Frame = -1 Query: 390 AVRGERTGQGYPQRRVQGRGQHLRRHSGDGAVERTAPPAEACLPEDE-RGIQAGCCSRRE 214 AV +G YP Q LR G+G +ER P A CLP+ R C +R Sbjct: 1451 AVAAGNSGDPYPMGPFACLVQSLRSLLGEGPLER--PGARLCLPDGPLRTAAKRCYGKRP 1508 Query: 213 VPADSLMLHIFAE 175 D+ + I A+ Sbjct: 1509 GLEDTAHILIAAQ 1521
>Y036_HAEIN (Q57335) Hypothetical ABC transporter ATP-binding protein HI0036| Length = 592 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/58 (22%), Positives = 29/58 (50%) Frame = +1 Query: 4 RNVRVVQNLWFFRVVLLLIMYCWSKEFWLHNPAMICPKRYTTSSPPLYVSTLIYRSIL 177 + + + ++ F + LL+ W K+FW+ + PKR + P L+ ++ ++L Sbjct: 16 QTLAITSVVFSFGIFLLVRFTQWGKQFWMFAGGYLSPKR--SIKPILFFLLIVAMTLL 71
>FA54A_HUMAN (Q6P444) Protein FAM54A (DUF729 domain containing protein 1)| Length = 385 Score = 27.3 bits (59), Expect = 8.9 Identities = 15/39 (38%), Positives = 22/39 (56%) Frame = +3 Query: 210 ELLVLSSSRLGFLVHLPEDKLLLGELSVRRHRHLSVDGD 326 E+ L +S L ++++ LG+LS R HLSVD D Sbjct: 161 EMQELKNSTNSSSFGLSDERISLGQLSSSRAAHLSVDPD 199 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,105,582 Number of Sequences: 219361 Number of extensions: 1176983 Number of successful extensions: 3469 Number of sequences better than 10.0: 64 Number of HSP's better than 10.0 without gapping: 3370 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3469 length of database: 80,573,946 effective HSP length: 111 effective length of database: 56,224,875 effective search space used: 1349397000 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
