>gb|AY107812.1| Zea mays PCO119122 mRNA sequence
          Length = 696

 Score =  121 bits (61), Expect = 2e-24
 Identities = 177/215 (82%), Gaps = 3/215 (1%)
 Strand = Plus / Plus

                                                                       
Query: 193 catcagactgtcggcaggaacttctcgtcttgagcagcagccggcttggattcctcgttc 252
           |||||||| | ||||| |||||||||| |||   ||||||| ||||| |||| |||   |
Sbjct: 368 catcagacagccggcaagaacttctcgcctt---cagcagcgggcttcgattgctcaccc 424

                                                                       
Query: 253 atcttccggaagacaagcttctgctgggggagctgtccgttcgacggcaccgtcacctga 312
           |  |||||||| || |||||||| || || ||||| ||||| || |||||||| ||||| 
Sbjct: 425 actttccggaaaactagcttctgttgcggaagctggccgttagagggcaccgtgacctgg 484

                                                                       
Query: 313 gtgtcgacggagatgctgtcctcgtccttgaactcgcctctgaggatacccttggccagt 372
           ||||| ||  |||||||||||||||||||||| || ||||||||||| ||||| || |||
Sbjct: 485 gtgtccacaaagatgctgtcctcgtccttgaaatcacctctgaggatgcccttcgcgagt 544

                                              
Query: 373 tcgttctccacgtactgctggagcactcgcttcac 407
           ||||||||||||| ||| || | ||||| ||||||
Sbjct: 545 tcgttctccacgtgctgttgaatcactctcttcac 579

>ref|XM_468773.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3546

 Score =  109 bits (55), Expect = 7e-21
 Identities = 160/195 (82%)
 Strand = Plus / Minus

                                                                        
Query: 214  ttctcgtcttgagcagcagccggcttggattcctcgttcatcttccggaagacaagcttc 273
            |||||||||| ||||||||| ||   |||||| ||  |||| ||  |||| || ||||| 
Sbjct: 3155 ttctcgtcttcagcagcagctggtgcggattcttcactcattttgtggaaaacgagcttt 3096

                                                                        
Query: 274  tgctgggggagctgtccgttcgacggcaccgtcacctgagtgtcgacggagatgctgtcc 333
            ||||| |||||||| || || || ||||| || ||||| ||||| ||   ||||||||||
Sbjct: 3095 tgctgagggagctgaccattagatggcacggtgacctgggtgtctaccaggatgctgtcc 3036

                                                                        
Query: 334  tcgtccttgaactcgcctctgaggatacccttggccagttcgttctccacgtactgctgg 393
            ||||||||||| || ||||| ||||||||||| ||||| ||||||||||| ||||| || 
Sbjct: 3035 tcgtccttgaaatcacctctcaggatacccttcgccagctcgttctccacatactgttga 2976

                           
Query: 394  agcactcgcttcact 408
            | |||||||||||||
Sbjct: 2975 atcactcgcttcact 2961

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  109 bits (55), Expect = 7e-21
 Identities = 160/195 (82%)
 Strand = Plus / Minus

                                                                            
Query: 214      ttctcgtcttgagcagcagccggcttggattcctcgttcatcttccggaagacaagcttc 273
                |||||||||| ||||||||| ||   |||||| ||  |||| ||  |||| || ||||| 
Sbjct: 17651152 ttctcgtcttcagcagcagctggtgcggattcttcactcattttgtggaaaacgagcttt 17651093

                                                                            
Query: 274      tgctgggggagctgtccgttcgacggcaccgtcacctgagtgtcgacggagatgctgtcc 333
                ||||| |||||||| || || || ||||| || ||||| ||||| ||   ||||||||||
Sbjct: 17651092 tgctgagggagctgaccattagatggcacggtgacctgggtgtctaccaggatgctgtcc 17651033

                                                                            
Query: 334      tcgtccttgaactcgcctctgaggatacccttggccagttcgttctccacgtactgctgg 393
                ||||||||||| || ||||| ||||||||||| ||||| ||||||||||| ||||| || 
Sbjct: 17651032 tcgtccttgaaatcacctctcaggatacccttcgccagctcgttctccacatactgttga 17650973

                               
Query: 394      agcactcgcttcact 408
                | |||||||||||||
Sbjct: 17650972 atcactcgcttcact 17650958

>gb|AC137999.2| Oryza sativa chromosome 3 BAC OSJNBa0020H02 genomic sequence,
            complete sequence
          Length = 97152

 Score =  109 bits (55), Expect = 7e-21
 Identities = 160/195 (82%)
 Strand = Plus / Plus

                                                                        
Query: 214  ttctcgtcttgagcagcagccggcttggattcctcgttcatcttccggaagacaagcttc 273
            |||||||||| ||||||||| ||   |||||| ||  |||| ||  |||| || ||||| 
Sbjct: 3925 ttctcgtcttcagcagcagctggtgcggattcttcactcattttgtggaaaacgagcttt 3984

                                                                        
Query: 274  tgctgggggagctgtccgttcgacggcaccgtcacctgagtgtcgacggagatgctgtcc 333
            ||||| |||||||| || || || ||||| || ||||| ||||| ||   ||||||||||
Sbjct: 3985 tgctgagggagctgaccattagatggcacggtgacctgggtgtctaccaggatgctgtcc 4044

                                                                        
Query: 334  tcgtccttgaactcgcctctgaggatacccttggccagttcgttctccacgtactgctgg 393
            ||||||||||| || ||||| ||||||||||| ||||| ||||||||||| ||||| || 
Sbjct: 4045 tcgtccttgaaatcacctctcaggatacccttcgccagctcgttctccacatactgttga 4104

                           
Query: 394  agcactcgcttcact 408
            | |||||||||||||
Sbjct: 4105 atcactcgcttcact 4119

>gb|AC133398.4| Oryza sativa chromosome 3 BAC OSJNBa0083F15 genomic sequence, complete
              sequence
          Length = 136916

 Score =  109 bits (55), Expect = 7e-21
 Identities = 160/195 (82%)
 Strand = Plus / Plus

                                                                          
Query: 214    ttctcgtcttgagcagcagccggcttggattcctcgttcatcttccggaagacaagcttc 273
              |||||||||| ||||||||| ||   |||||| ||  |||| ||  |||| || ||||| 
Sbjct: 132855 ttctcgtcttcagcagcagctggtgcggattcttcactcattttgtggaaaacgagcttt 132914

                                                                          
Query: 274    tgctgggggagctgtccgttcgacggcaccgtcacctgagtgtcgacggagatgctgtcc 333
              ||||| |||||||| || || || ||||| || ||||| ||||| ||   ||||||||||
Sbjct: 132915 tgctgagggagctgaccattagatggcacggtgacctgggtgtctaccaggatgctgtcc 132974

                                                                          
Query: 334    tcgtccttgaactcgcctctgaggatacccttggccagttcgttctccacgtactgctgg 393
              ||||||||||| || ||||| ||||||||||| ||||| ||||||||||| ||||| || 
Sbjct: 132975 tcgtccttgaaatcacctctcaggatacccttcgccagctcgttctccacatactgttga 133034

                             
Query: 394    agcactcgcttcact 408
              | |||||||||||||
Sbjct: 133035 atcactcgcttcact 133049

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  109 bits (55), Expect = 7e-21
 Identities = 160/195 (82%)
 Strand = Plus / Minus

                                                                            
Query: 214      ttctcgtcttgagcagcagccggcttggattcctcgttcatcttccggaagacaagcttc 273
                |||||||||| ||||||||| ||   |||||| ||  |||| ||  |||| || ||||| 
Sbjct: 17644693 ttctcgtcttcagcagcagctggtgcggattcttcactcattttgtggaaaacgagcttt 17644634

                                                                            
Query: 274      tgctgggggagctgtccgttcgacggcaccgtcacctgagtgtcgacggagatgctgtcc 333
                ||||| |||||||| || || || ||||| || ||||| ||||| ||   ||||||||||
Sbjct: 17644633 tgctgagggagctgaccattagatggcacggtgacctgggtgtctaccaggatgctgtcc 17644574

                                                                            
Query: 334      tcgtccttgaactcgcctctgaggatacccttggccagttcgttctccacgtactgctgg 393
                ||||||||||| || ||||| ||||||||||| ||||| ||||||||||| ||||| || 
Sbjct: 17644573 tcgtccttgaaatcacctctcaggatacccttcgccagctcgttctccacatactgttga 17644514

                               
Query: 394      agcactcgcttcact 408
                | |||||||||||||
Sbjct: 17644513 atcactcgcttcact 17644499

>dbj|AK069123.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007C17, full
            insert sequence
          Length = 3303

 Score =  109 bits (55), Expect = 7e-21
 Identities = 160/195 (82%)
 Strand = Plus / Minus

                                                                        
Query: 214  ttctcgtcttgagcagcagccggcttggattcctcgttcatcttccggaagacaagcttc 273
            |||||||||| ||||||||| ||   |||||| ||  |||| ||  |||| || ||||| 
Sbjct: 3155 ttctcgtcttcagcagcagctggtgcggattcttcactcattttgtggaaaacgagcttt 3096

                                                                        
Query: 274  tgctgggggagctgtccgttcgacggcaccgtcacctgagtgtcgacggagatgctgtcc 333
            ||||| |||||||| || || || ||||| || ||||| ||||| ||   ||||||||||
Sbjct: 3095 tgctgagggagctgaccattagatggcacggtgacctgggtgtctaccaggatgctgtcc 3036

                                                                        
Query: 334  tcgtccttgaactcgcctctgaggatacccttggccagttcgttctccacgtactgctgg 393
            ||||||||||| || ||||| ||||||||||| ||||| ||||||||||| ||||| || 
Sbjct: 3035 tcgtccttgaaatcacctctcaggatacccttcgccagctcgttctccacatactgttga 2976

                           
Query: 394  agcactcgcttcact 408
            | |||||||||||||
Sbjct: 2975 atcactcgcttcact 2961

>dbj|AK060637.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-D01, full
            insert sequence
          Length = 2290

 Score =  109 bits (55), Expect = 7e-21
 Identities = 160/195 (82%)
 Strand = Plus / Minus

                                                                        
Query: 214  ttctcgtcttgagcagcagccggcttggattcctcgttcatcttccggaagacaagcttc 273
            |||||||||| ||||||||| ||   |||||| ||  |||| ||  |||| || ||||| 
Sbjct: 2109 ttctcgtcttcagcagcagctggtgcggattcttcactcattttgtggaaaacgagcttt 2050

                                                                        
Query: 274  tgctgggggagctgtccgttcgacggcaccgtcacctgagtgtcgacggagatgctgtcc 333
            ||||| |||||||| || || || ||||| || ||||| ||||| ||   ||||||||||
Sbjct: 2049 tgctgagggagctgaccattagatggcacggtgacctgggtgtctaccaggatgctgtcc 1990

                                                                        
Query: 334  tcgtccttgaactcgcctctgaggatacccttggccagttcgttctccacgtactgctgg 393
            ||||||||||| || ||||| ||||||||||| ||||| ||||||||||| ||||| || 
Sbjct: 1989 tcgtccttgaaatcacctctcaggatacccttcgccagctcgttctccacatactgttga 1930

                           
Query: 394  agcactcgcttcact 408
            | |||||||||||||
Sbjct: 1929 atcactcgcttcact 1915

>emb|BX015981.1|CNS08KHT Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA24AA05 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 567

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 106 atatgcccaaagagatacactaccagttcg 135
           ||||||||||||| |||||| |||||||||
Sbjct: 219 atatgcccaaagacatacacgaccagttcg 190

>emb|BX569689.1| Synechococcus sp. WH8102 complete genome; segment 1/7
          Length = 348764

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 378   ctccacgtactgctggagcac 398
             |||||||||||||||||||||
Sbjct: 23702 ctccacgtactgctggagcac 23722

>ref|XM_655091.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2579.2), mRNA
          Length = 2751

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 4    aggaatgtcagagtcgtcca 23
            ||||||||||||||||||||
Sbjct: 2156 aggaatgtcagagtcgtcca 2137

>ref|XM_747822.1| Aspergillus fumigatus Af293 C6 transcription factor UaY (Afu1g15470)
            partial mRNA
          Length = 3267

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 264  gacaagcttctgctggggga 283
            ||||||||||||||||||||
Sbjct: 2437 gacaagcttctgctggggga 2418

>ref|XM_947841.1| Theileria annulata strain Ankara DEAD-box family helicase (TA07525)
            partial mRNA
          Length = 2274

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 101  ctatgatatgcccaaagagataca 124
            |||||||||||||||||| |||||
Sbjct: 2046 ctatgatatgcccaaagacataca 2069

>gb|BC115094.1| Danio rerio cDNA clone IMAGE:8109186, partial cds
          Length = 1488

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 11  tcagagtcgtccaaaacctc 30
           ||||||||||||||||||||
Sbjct: 536 tcagagtcgtccaaaacctc 555

>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 299     gcaccgtcacctgagtgtcg 318
               ||||||||||||||||||||
Sbjct: 5414972 gcaccgtcacctgagtgtcg 5414953

>gb|BC095862.1| Danio rerio hypothetical protein LOC553492, mRNA (cDNA clone
           IMAGE:7171967), partial cds
          Length = 1607

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 11  tcagagtcgtccaaaacctc 30
           ||||||||||||||||||||
Sbjct: 533 tcagagtcgtccaaaacctc 552

>gb|AC096533.3| Homo sapiens chromosome 1 clone RP11-6B6, complete sequence
          Length = 163339

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 70    tggagcaaagaattctggct 89
             ||||||||||||||||||||
Sbjct: 98840 tggagcaaagaattctggct 98859

>emb|CR759840.6| Zebrafish DNA sequence from clone DKEY-239O7 in linkage group 25,
             complete sequence
          Length = 110071

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 41    gggttgtcctgctgctaataatgt 64
             ||||||| ||||||||||||||||
Sbjct: 56225 gggttgttctgctgctaataatgt 56248

>emb|AL929309.6| Zebrafish DNA sequence from clone CH211-51L3 in linkage group 25,
             complete sequence
          Length = 191745

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 41    gggttgtcctgctgctaataatgt 64
             ||||||| ||||||||||||||||
Sbjct: 80560 gggttgttctgctgctaataatgt 80583


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,035,386
Number of Sequences: 3902068
Number of extensions: 3035386
Number of successful extensions: 50843
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 50779
Number of HSP's gapped (non-prelim): 64
length of query: 408
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 386
effective length of database: 17,147,199,772
effective search space: 6618819111992
effective search space used: 6618819111992
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)