>TOP2_PLAFK (P41001) DNA topoisomerase 2 (EC 5.99.1.3) (DNA topoisomerase II)|
          Length = 1398

 Score = 31.2 bits (69), Expect = 0.66
 Identities = 19/60 (31%), Positives = 29/60 (48%)
 Frame = +3

Query: 24  KLAQKAMEEKA*KRLLQIMKLEGLNKCNLRVDQQCLVIHVINGRRQRTFCTPKYSLKSQD 203
           K   KA   KA +R++ I KLE  N    +  Q+C +I +  G   +T C    S+  +D
Sbjct: 459 KKKMKAGSSKARERIIGIPKLEDANDAGSKYSQECTLI-LTEGDSAKTSCLAGLSIVGRD 517

>NUOL_RHOCA (P50939) NADH-quinone oxidoreductase chain L (EC 1.6.99.5) (NADH|
           dehydrogenase I, chain L) (NDH-1, chain L)
          Length = 712

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +2

Query: 230 LVATISVLIYQHRWRYWSKSEMTTWTHH 313
           +V T+S L++ + W Y +  E   WTHH
Sbjct: 86  VVTTVSALVHLYSWGYMAHDE--NWTHH 111

>BFAR_RAT (Q5PQN2) Bifunctional apoptosis regulator|
          Length = 450

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 5/32 (15%)
 Frame = +2

Query: 242 ISVLIYQHRWRYWSKSEMTT-----WTHHMKV 322
           +SVL     WR WS+SE+ T     W+H  KV
Sbjct: 369 LSVLELFSFWRIWSRSELKTVPQRMWSHFWKV 400

>BFAR_MOUSE (Q8R079) Bifunctional apoptosis regulator|
          Length = 450

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 5/32 (15%)
 Frame = +2

Query: 242 ISVLIYQHRWRYWSKSEMTT-----WTHHMKV 322
           +SVL     WR WS+SE+ T     W+H  KV
Sbjct: 369 LSVLELFSFWRIWSRSELKTVPQRMWSHFWKV 400

>BFAR_HUMAN (Q9NZS9) Bifunctional apoptosis regulator (RING finger protein 47)|
          Length = 450

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 5/32 (15%)
 Frame = +2

Query: 242 ISVLIYQHRWRYWSKSEMTT-----WTHHMKV 322
           +SVL     WR WS+SE+ T     W+H  KV
Sbjct: 369 LSVLELFSFWRIWSRSELKTVPQRMWSHFWKV 400

>SCRB1_PIG (Q8SQC1) Scavenger receptor class B member 1 (SRB1) (SR-BI) (High|
           density lipoprotein receptor SR-BI)
          Length = 509

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = +3

Query: 63  RLLQIMKLEGLNKCNLRVDQQCLVIHVINGRRQRTFCTPKYSLK 194
           R+  + K  GL+K N     QC +I+  +G+    F TP+ SL+
Sbjct: 230 RIHLVDKWNGLSKVNFWHSDQCNMINGTSGQMWAPFMTPESSLE 273

>REGQ_BP82 (P13870) Antitermination protein Q|
          Length = 229

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +2

Query: 236 ATISVLIYQHRWRYWSKSEMTTWTHHMKVDE 328
           A +S+  +Q  W  WS SE   W H + + +
Sbjct: 93  AVLSLEEHQKAWLLWSYSESVRWEHQVTITQ 123

>LIP_STAEP (P0C0R3) Lipase precursor (EC 3.1.1.3) (Glycerol ester hydrolase)|
          Length = 688

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = +1

Query: 154 DGNELFVHQNIPSRVKINETSLSRSISCN-NFSSDLPA*MEILEQKRDDHMDASYE 318
           DGNE    Q       +NE S   SI+ N +  ++ P   ++++Q++D   D   E
Sbjct: 55  DGNEKLSEQQSTQNKNVNEKSNVNSITENESLHNETPKNEDLIQQQKDSQNDNKSE 110

>CGR1_CANGA (O74208) ATP-binding cassette transporter CGR1 (Pleomorphic drug|
           resistance homolog)
          Length = 1542

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 20/68 (29%), Positives = 30/68 (44%)
 Frame = +2

Query: 131 GHSCDKRQTATNFLYTKIFPQESRLMKPAFREALVATISVLIYQHRWRYWSKSEMTTWTH 310
           G+ C KRQT  +FL +   P E R+ K    + +    + L       YW  SE      
Sbjct: 404 GYFCPKRQTIPDFLTSITSPAERRINKEYLDKGIKVPQTPL---DMVEYWHNSEEYKQLR 460

Query: 311 HMKVDETV 334
             ++DET+
Sbjct: 461 E-EIDETL 467


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,996,732
Number of Sequences: 219361
Number of extensions: 664308
Number of successful extensions: 1522
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1522
length of database: 80,573,946
effective HSP length: 90
effective length of database: 60,831,456
effective search space used: 1459954944
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)