ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl27e01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1SUS1_HORVU (P31922) Sucrose synthase 1 (EC 2.4.1.13) (Sucrose-UD... 100 1e-21
2SUS1_ORYSA (P30298) Sucrose synthase 1 (EC 2.4.1.13) (Sucrose-UD... 98 5e-21
3SUS2_ORYSA (P31924) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UD... 90 1e-18
4SUS2_MAIZE (P49036) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UD... 90 1e-18
5SUS2_TULGE (Q41607) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UD... 89 3e-18
6SUS2_HORVU (P31923) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UD... 89 3e-18
7SUS1_MAIZE (P04712) Sucrose synthase 1 (EC 2.4.1.13) (Sucrose-UD... 87 1e-17
8SUS1_TULGE (Q41608) Sucrose synthase 1 (EC 2.4.1.13) (Sucrose-UD... 86 2e-17
9SUS3_ORYSA (Q43009) Sucrose synthase 3 (EC 2.4.1.13) (Sucrose-UD... 86 3e-17
10SUSY_PHAAU (Q01390) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP ... 82 3e-16
11SUSY_BETVU (Q42652) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP ... 81 7e-16
12SUSY_SOYBN (P13708) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP ... 80 9e-16
13SUSY_MEDSA (O65026) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP ... 79 2e-15
14SUSY_VICFA (P31926) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP ... 79 2e-15
15SUS2_ARATH (Q00917) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP ... 75 5e-14
16SUS2_PEA (O24301) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP ... 74 6e-14
17SUS1_DAUCA (P49035) Sucrose synthase isoform I (EC 2.4.1.13) (Su... 74 1e-13
18SUSY_ALNGL (P49034) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP ... 73 2e-13
19SUS1_ARATH (P49040) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP ... 73 2e-13
20SUS2_DAUCA (O49845) Sucrose synthase isoform II (EC 2.4.1.13) (S... 72 4e-13
21SUSY_LYCES (P49037) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP ... 71 7e-13
22SUS1_SOLTU (P10691) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP ... 71 7e-13
23SUS2_SOLTU (P49039) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP ... 70 2e-12
24SUSY_SACOF (P31925) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP ... 54 1e-07
25TOP1_AERPE (Q9YB01) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoi... 30 1.1
26SYY_NITWN (Q3SS12) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosin... 30 1.4
27FCR1_CANAL (O93870) Fluconazole resistance protein 1 29 2.4
28GSPJ_VIBCH (P45776) General secretion pathway protein J precurso... 29 2.4
29SDS3_MOUSE (Q8BR65) Sin3 histone deacetylase corepressor complex... 29 3.1
30SDS3_HUMAN (Q9H7L9) Sin3 histone deacetylase corepressor complex... 29 3.1
31HSCC_ECOLI (P77319) Chaperone protein hscC (Hsc62) 29 3.1
32CAD_DROME (P09085) Homeotic protein caudal 29 3.1
33ZIPA_ECOLI (P77173) Cell division protein zipA 28 4.0
34ZIPA_ECOL6 (Q8FFC0) Cell division protein zipA homolog 28 5.3
35ZIPA_SHIFL (Q83QN9) Cell division protein zipA homolog 28 5.3
36RAD60_SCHPO (Q9USX3) DNA repair protein rad60 28 5.3
37SYY_RHILO (Q98NS5) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosin... 28 6.9
38SYY_BRUSU (Q8G105) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosin... 28 6.9
39SYY_BRUME (Q8YGV8) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosin... 28 6.9
40SYY_BRUAB (Q57DI5) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosin... 28 6.9
41SYY_BRUA2 (Q2YNR0) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosin... 28 6.9
42ZDH19_HUMAN (Q8WVZ1) Probable palmitoyltransferase ZDHHC19 (EC 2... 28 6.9
43ETFB_MOUSE (Q9DCW4) Electron transfer flavoprotein beta-subunit ... 28 6.9
44COBQ_VIBF1 (Q5E0T7) Cobyric acid synthase 28 6.9
45ZDH19_MOUSE (Q810M5) Probable palmitoyltransferase ZDHHC19 (EC 2... 28 6.9
46PNS1_DEBHA (Q6BIV4) Protein PNS1 28 6.9
47FOXN1_HUMAN (O15353) Forkhead box protein N1 (Transcription fact... 27 9.0
48SYY_RHIME (Q92PK5) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosin... 27 9.0
49SYY_AGRT5 (Q8UED2) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosin... 27 9.0 
>SUS1_HORVU (P31922) Sucrose synthase 1 (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase 1)
          Length = 807

 Score =  100 bits (248), Expect = 1e-21
 Identities = 48/49 (97%), Positives = 49/49 (100%)
 Frame = -1

Query: 400 MTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGESN 254
           MTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGES+
Sbjct: 757 MTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGESS 805
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>SUS1_ORYSA (P30298) Sucrose synthase 1 (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase 1)
          Length = 808

 Score = 97.8 bits (242), Expect = 5e-21
 Identities = 46/48 (95%), Positives = 48/48 (100%)
 Frame = -1

Query: 400 MTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGES 257
           MTLTGVYGFWKYVSNLERRETRRY+EMFYALKYRSLA+AVPLAVDGES
Sbjct: 758 MTLTGVYGFWKYVSNLERRETRRYIEMFYALKYRSLASAVPLAVDGES 805
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>SUS2_ORYSA (P31924) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase 2)
          Length = 816

 Score = 89.7 bits (221), Expect = 1e-18
 Identities = 41/47 (87%), Positives = 45/47 (95%)
 Frame = -1

Query: 400 MTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGE 260
           MTLTGVYGFWKYVSNLERRETRRYLEM YALKYR++A+ VPLAV+GE
Sbjct: 766 MTLTGVYGFWKYVSNLERRETRRYLEMLYALKYRTMASTVPLAVEGE 812
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>SUS2_MAIZE (P49036) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase 2)
          Length = 816

 Score = 89.7 bits (221), Expect = 1e-18
 Identities = 41/47 (87%), Positives = 45/47 (95%)
 Frame = -1

Query: 400 MTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGE 260
           MTLTGVYGFWKYVSNLERRETRRYLEM YALKYR++A+ VPLAV+GE
Sbjct: 766 MTLTGVYGFWKYVSNLERRETRRYLEMLYALKYRTMASTVPLAVEGE 812
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>SUS2_TULGE (Q41607) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase 2)
          Length = 820

 Score = 89.0 bits (219), Expect = 3e-18
 Identities = 40/48 (83%), Positives = 46/48 (95%)
 Frame = -1

Query: 400 MTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGES 257
           +TL GVYGFWKYVSNL+RRET+RYLEMFYALKYR+LA +VPLAVDGE+
Sbjct: 762 LTLAGVYGFWKYVSNLDRRETKRYLEMFYALKYRNLAKSVPLAVDGEA 809
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>SUS2_HORVU (P31923) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase 2)
          Length = 816

 Score = 88.6 bits (218), Expect = 3e-18
 Identities = 40/49 (81%), Positives = 46/49 (93%)
 Frame = -1

Query: 400 MTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGESN 254
           MTL+GVYGFWKYVSNL+RRETRRYLEM YALKYR +AA VPLAV+GE++
Sbjct: 766 MTLSGVYGFWKYVSNLDRRETRRYLEMLYALKYRKMAATVPLAVEGETS 814
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>SUS1_MAIZE (P04712) Sucrose synthase 1 (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase 1) (Shrunken-1)
          Length = 802

 Score = 87.0 bits (214), Expect = 1e-17
 Identities = 40/45 (88%), Positives = 43/45 (95%)
 Frame = -1

Query: 400 MTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 266
           MTLTGVYGFWKYVSNLERRETRRY+EMFYALKYRSLA+ VPL+ D
Sbjct: 758 MTLTGVYGFWKYVSNLERRETRRYIEMFYALKYRSLASQVPLSFD 802
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>SUS1_TULGE (Q41608) Sucrose synthase 1 (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase 1)
          Length = 805

 Score = 86.3 bits (212), Expect = 2e-17
 Identities = 39/45 (86%), Positives = 43/45 (95%)
 Frame = -1

Query: 400 MTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 266
           MTL GVYGFWKYVSNL+RRETRRYLEMFYALKYR+LA +VPLA+D
Sbjct: 760 MTLAGVYGFWKYVSNLDRRETRRYLEMFYALKYRNLAKSVPLAID 804
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>SUS3_ORYSA (Q43009) Sucrose synthase 3 (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase 3)
          Length = 816

 Score = 85.5 bits (210), Expect = 3e-17
 Identities = 37/49 (75%), Positives = 45/49 (91%)
 Frame = -1

Query: 400 MTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGESN 254
           MTL+GVYGFWKYV+NL+RRETRRYLEM YALKYR +A  VPLA++GE++
Sbjct: 766 MTLSGVYGFWKYVTNLDRRETRRYLEMLYALKYRKMATTVPLAIEGEAS 814
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>SUSY_PHAAU (Q01390) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase)
          Length = 805

 Score = 82.0 bits (201), Expect = 3e-16
 Identities = 37/45 (82%), Positives = 43/45 (95%)
 Frame = -1

Query: 400 MTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 266
           +TLTGVYGFWK+VSNL+RRE+RRYLEMFYALKYR LA +VPLAV+
Sbjct: 761 LTLTGVYGFWKHVSNLDRRESRRYLEMFYALKYRKLAESVPLAVE 805
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>SUSY_BETVU (Q42652) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase) (Fragment)
          Length = 766

 Score = 80.9 bits (198), Expect = 7e-16
 Identities = 38/47 (80%), Positives = 40/47 (85%)
 Frame = -1

Query: 400 MTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGE 260
           MTL GVYGFWKYVS LERRETRRYLEMFY LK+R LA +VPLA D E
Sbjct: 707 MTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDLANSVPLATDEE 753
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>SUSY_SOYBN (P13708) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase) (Nodulin-100)
          Length = 805

 Score = 80.5 bits (197), Expect = 9e-16
 Identities = 36/45 (80%), Positives = 42/45 (93%)
 Frame = -1

Query: 400 MTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 266
           +TLTGVYGFWK+VSNL+RRE+RRYLEMFYALKYR LA +VPLA +
Sbjct: 761 LTLTGVYGFWKHVSNLDRRESRRYLEMFYALKYRKLAESVPLAAE 805
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>SUSY_MEDSA (O65026) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase)
          Length = 805

 Score = 79.3 bits (194), Expect = 2e-15
 Identities = 36/45 (80%), Positives = 42/45 (93%)
 Frame = -1

Query: 400 MTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 266
           +TLTGVYGFWK+VSNL+R E+RRYLEMFYALKYR LA +VPLAV+
Sbjct: 761 LTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 805
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>SUSY_VICFA (P31926) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase)
          Length = 806

 Score = 79.3 bits (194), Expect = 2e-15
 Identities = 36/45 (80%), Positives = 42/45 (93%)
 Frame = -1

Query: 400 MTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 266
           +TLTGVYGFWK+VSNL+R E+RRYLEMFYALKYR LA +VPLAV+
Sbjct: 761 LTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 805
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>SUS2_ARATH (Q00917) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase)
          Length = 805

 Score = 74.7 bits (182), Expect = 5e-14
 Identities = 33/45 (73%), Positives = 39/45 (86%)
 Frame = -1

Query: 400 MTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 266
           +TL GVY FWK+VS LERRETRRYLEMFY+LK+R LA ++PLA D
Sbjct: 759 LTLAGVYAFWKHVSKLERRETRRYLEMFYSLKFRDLANSIPLATD 803
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>SUS2_PEA (O24301) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase 2)
          Length = 809

 Score = 74.3 bits (181), Expect = 6e-14
 Identities = 34/43 (79%), Positives = 37/43 (86%)
 Frame = -1

Query: 400 MTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLA 272
           MTL GVY FWKYVS LERRETRRYLEMFY LK+R LA +VP+A
Sbjct: 765 MTLAGVYSFWKYVSKLERRETRRYLEMFYILKFRDLANSVPIA 807
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>SUS1_DAUCA (P49035) Sucrose synthase isoform I (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase 1) (Susy*Dc1)
          Length = 808

 Score = 73.6 bits (179), Expect = 1e-13
 Identities = 34/45 (75%), Positives = 38/45 (84%)
 Frame = -1

Query: 400 MTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 266
           +TL GVYGFWK+VS L+R E RRYLEMFYALKYR LA +VPLA D
Sbjct: 763 LTLAGVYGFWKHVSKLDRLEIRRYLEMFYALKYRKLAESVPLAKD 807
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>SUSY_ALNGL (P49034) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase)
          Length = 803

 Score = 72.8 bits (177), Expect = 2e-13
 Identities = 33/45 (73%), Positives = 40/45 (88%)
 Frame = -1

Query: 400 MTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 266
           +TLTGV  FWK+VSNL+R E+RRY+EMFYALKYR LA +VPLAV+
Sbjct: 759 LTLTGVTAFWKHVSNLDRLESRRYIEMFYALKYRKLAESVPLAVE 803
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>SUS1_ARATH (P49040) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase)
          Length = 806

 Score = 72.8 bits (177), Expect = 2e-13
 Identities = 36/45 (80%), Positives = 39/45 (86%)
 Frame = -1

Query: 400 MTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 266
           +TLTGVYGFWK+VSNL+R E RRYLEMFYALKYR L  AVPLA D
Sbjct: 763 LTLTGVYGFWKHVSNLDRLEARRYLEMFYALKYRPL--AVPLAQD 805
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>SUS2_DAUCA (O49845) Sucrose synthase isoform II (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase 2) (Susy*Dc2)
          Length = 801

 Score = 71.6 bits (174), Expect = 4e-13
 Identities = 34/45 (75%), Positives = 39/45 (86%)
 Frame = -1

Query: 400 MTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 266
           +TL GVYGFWK+VS L+R E RRYLEMF ALKYR+LA +VPLAVD
Sbjct: 757 LTLGGVYGFWKHVSKLDRIEIRRYLEMFCALKYRNLAESVPLAVD 801
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>SUSY_LYCES (P49037) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase)
          Length = 805

 Score = 70.9 bits (172), Expect = 7e-13
 Identities = 32/45 (71%), Positives = 37/45 (82%)
 Frame = -1

Query: 400 MTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 266
           +TL  VYGFWK+VS L+R E RRYLEMFYALKYR +A AVPLA +
Sbjct: 761 LTLAAVYGFWKHVSKLDRLEIRRYLEMFYALKYRKMAEAVPLAAE 805
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>SUS1_SOLTU (P10691) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase) (SS16)
          Length = 805

 Score = 70.9 bits (172), Expect = 7e-13
 Identities = 32/45 (71%), Positives = 37/45 (82%)
 Frame = -1

Query: 400 MTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 266
           +TL  VYGFWK+VS L+R E RRYLEMFYALKYR +A AVPLA +
Sbjct: 761 LTLAAVYGFWKHVSKLDRLEIRRYLEMFYALKYRKMAEAVPLAAE 805
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>SUS2_SOLTU (P49039) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase) (SS65)
          Length = 805

 Score = 69.7 bits (169), Expect = 2e-12
 Identities = 32/45 (71%), Positives = 37/45 (82%)
 Frame = -1

Query: 400 MTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 266
           +TL  VYGFWK+VS L+R E RRYLEMFYALK+R LA  VPLAV+
Sbjct: 761 LTLAAVYGFWKHVSKLDRLEIRRYLEMFYALKFRKLAQLVPLAVE 805
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>SUSY_SACOF (P31925) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase) (Fragment)
          Length = 218

 Score = 53.5 bits (127), Expect = 1e-07
 Identities = 24/33 (72%), Positives = 28/33 (84%)
 Frame = -1

Query: 400 MTLTGVYGFWKYVSNLERRETRRYLEMFYALKY 302
           MTLTG YGFW YVS LER +T RY++MFYAL+Y
Sbjct: 186 MTLTGAYGFWNYVSKLERGDT-RYIDMFYALEY 217
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>TOP1_AERPE (Q9YB01) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)|
           (Omega-protein) (Relaxing enzyme) (Untwisting enzyme)
           (Swivelase)
          Length = 673

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +1

Query: 49  GRRLFEAAGMNQQAALPKTSRMCRDIKSHTPRQTDQMKTTVDK 177
           GRR+  +AG  Q   L +  R  R+I  H P+ +  +K T +K
Sbjct: 183 GRRVILSAGRVQSPTLVEAYRRWREINLHVPKASVAVKITAEK 225
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>SYY_NITWN (Q3SS12) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA|
           ligase) (TyrRS)
          Length = 417

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -1

Query: 397 TLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPL 275
           T+  VY +W+Y  N+E  +  R+L++F  L    +A    L
Sbjct: 250 TMLPVYDYWQYWRNVEDADVGRFLKLFTILPMGEIAKLAAL 290
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>FCR1_CANAL (O93870) Fluconazole resistance protein 1|
          Length = 517

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
 Frame = +3

Query: 6   RNIALNSLMKDEHHGQAFIRGGWHEPASSTAQDLTNVP-------RHQIAHPTTDRPNEN 164
           RN+  +S +  EH G+AFI      P +S  Q  T+ P       + ++  P++D  NE+
Sbjct: 178 RNLKSSSRLFAEHKGEAFI----GSPVTSPQQMPTSNPFRRTSMFKEELESPSSDHYNES 233

Query: 165 YGRQIIAQP 191
              Q + +P
Sbjct: 234 IFSQSVDEP 242
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>GSPJ_VIBCH (P45776) General secretion pathway protein J precursor (Cholera|
           toxin secretion protein epsJ)
          Length = 221

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 24  SLMKDEHHGQAFIRGGWHEP 83
           SL+  + HG  F+R GWH P
Sbjct: 95  SLLDSDQHGLLFVRLGWHNP 114
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>SDS3_MOUSE (Q8BR65) Sin3 histone deacetylase corepressor complex component|
           SDS3 (Suppressor of defective silencing 3 protein
           homolog)
          Length = 328

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
 Frame = +2

Query: 122 TSNRTPHDRQTK*KLR*TNHSAADTSPSRSMNAPSSCP----ESALVAVALAVDRQWNCS 289
           T  +   D +T  KL+     A+ +SP      P+  P    E+ +    L  D++W   
Sbjct: 212 TDEQIMEDLRTLNKLKSPKRPASPSSPEHLPATPAESPAQRFEARIEDGKLYYDKRWYHK 271

Query: 290 SQATVLESVEHLQVTASLA 346
           SQA  LES ++ +++  ++
Sbjct: 272 SQAIYLESKDNQKLSCVIS 290
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>SDS3_HUMAN (Q9H7L9) Sin3 histone deacetylase corepressor complex component|
           SDS3 (Suppressor of defective silencing 3 protein
           homolog)
          Length = 328

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
 Frame = +2

Query: 122 TSNRTPHDRQTK*KLR*TNHSAADTSPSRSMNAPSSCP----ESALVAVALAVDRQWNCS 289
           T  +   D +T  KL+     A+ +SP      P+  P    E+ +    L  D++W   
Sbjct: 212 TDEQIMEDLRTLNKLKSPKRPASPSSPEHLPATPAESPAQRFEARIEDGKLYYDKRWYHK 271

Query: 290 SQATVLESVEHLQVTASLA 346
           SQA  LES ++ +++  ++
Sbjct: 272 SQAIYLESKDNQKLSCVIS 290
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>HSCC_ECOLI (P77319) Chaperone protein hscC (Hsc62)|
          Length = 556

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 17/60 (28%), Positives = 28/60 (46%)
 Frame = -3

Query: 182 YDLSTVVFIWSVCRGVCDLMSRHIREVLGSAACWFMPAASNKRLPVVFIFHQRVQCNVSL 3
           YD ST+V + +  +  C L S  I EV+ +  C +       R  V  IF   ++ N ++
Sbjct: 328 YDPSTIVALGAAIQAACRLRSEDIEEVILTDICPYSLGVEVNRQGVSGIFSPIIERNTTV 387
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>CAD_DROME (P09085) Homeotic protein caudal|
          Length = 427

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
 Frame = +3

Query: 42  HHGQAFIRGGWHEPASSTAQD-LTNVP--RHQI 131
           H   A   G WH PASSTA + + NVP   HQ+
Sbjct: 73  HSAAAASAGEWHSPASSTADNFVQNVPTSAHQL 105
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>ZIPA_ECOLI (P77173) Cell division protein zipA|
          Length = 328

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
 Frame = +3

Query: 36  DEHHGQAFIRGGWHEPASSTAQDLTNV-PRHQIAHPTTDRPNENYGRQIIAQPTLHPPAR 212
           DE  G+  +    H PA++   +     P+HQ   P        Y      QP   PP  
Sbjct: 60  DEGVGEVRVHRVNHAPANAQEHEAARPSPQHQYQPP--------YASAQPRQPVQQPPEA 111

Query: 213 *MRPLHAPNP 242
            + P HAP+P
Sbjct: 112 QVPPQHAPHP 121
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>ZIPA_ECOL6 (Q8FFC0) Cell division protein zipA homolog|
          Length = 332

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
 Frame = +3

Query: 36  DEHHGQAFIRGGWHEPASSTAQDLTNV-PRHQIAHPTTDRPNENYGRQIIAQPTLHPPAR 212
           DE  G+  +    H PA++   +     P+HQ   P        Y      QP   PP  
Sbjct: 60  DEGVGEVRVHRVNHAPANAQEHEAARPSPQHQYQPP--------YASAQPRQPVQQPPEA 111

Query: 213 *MRPLHAPNP 242
            + P HAP P
Sbjct: 112 QVPPQHAPRP 121
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>ZIPA_SHIFL (Q83QN9) Cell division protein zipA homolog|
          Length = 327

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
 Frame = +3

Query: 36  DEHHGQAFIRGGWHEPASSTAQDLTNV-PRHQIAHPTTDRPNENYGRQIIAQPTLHPPAR 212
           DE  G+  +    H PA++   +     P+HQ   P        Y      QP   PP  
Sbjct: 59  DEGVGEVRVHRVNHAPANAQEHEAARPSPQHQYLPP--------YASAQPRQPVQQPPEA 110

Query: 213 *MRPLHAPNP 242
            + P HAP P
Sbjct: 111 QVPPQHAPRP 120
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>RAD60_SCHPO (Q9USX3) DNA repair protein rad60|
          Length = 406

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
 Frame = +2

Query: 176 NHSAADTSPSRSMNAPSSCPESALVAVALAVDRQWNCSSQATV----LESVEHLQVTASL 343
           N   +DT+P+  +N     P+SA+  V   V   +N  + A +    + S   L  T+SL
Sbjct: 80  NQDVSDTTPNACLNEGRHSPKSAISCVTQPVSPVYNTRAAANLRNNSINSEAALSTTSSL 139

Query: 344 APLQVAHVLPE 376
                A  L E
Sbjct: 140 LDDDFARRLEE 150
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>SYY_RHILO (Q98NS5) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA|
           ligase) (TyrRS)
          Length = 417

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -1

Query: 382 YGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPL 275
           Y FW+Y  N E  +  R+L++F  L    +A    L
Sbjct: 255 YDFWQYWRNTEDADVERFLKIFTRLPLPEIARLAAL 290
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>SYY_BRUSU (Q8G105) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA|
           ligase) (TyrRS)
          Length = 417

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = -1

Query: 394 LTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPL 275
           +   Y FW+Y  N E  +  R+L+++  L    +A    L
Sbjct: 251 MLSAYDFWQYWRNTEDADVERFLKLYTTLPLDEIARLAEL 290
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>SYY_BRUME (Q8YGV8) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA|
           ligase) (TyrRS)
          Length = 417

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = -1

Query: 394 LTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPL 275
           +   Y FW+Y  N E  +  R+L+++  L    +A    L
Sbjct: 251 MLSAYDFWQYWRNTEDADVERFLKLYTTLPLDEIARLAEL 290
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>SYY_BRUAB (Q57DI5) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA|
           ligase) (TyrRS)
          Length = 417

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = -1

Query: 394 LTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPL 275
           +   Y FW+Y  N E  +  R+L+++  L    +A    L
Sbjct: 251 MLSAYDFWQYWRNTEDADVERFLKLYTTLPLDEIARLAEL 290
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>SYY_BRUA2 (Q2YNR0) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA|
           ligase) (TyrRS)
          Length = 417

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = -1

Query: 394 LTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPL 275
           +   Y FW+Y  N E  +  R+L+++  L    +A    L
Sbjct: 251 MLSAYDFWQYWRNTEDADVERFLKLYTTLPLDEIARLAEL 290
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>ZDH19_HUMAN (Q8WVZ1) Probable palmitoyltransferase ZDHHC19 (EC 2.3.1.-) (Zinc|
           finger DHHC domain-containing protein 19) (DHHC-19)
          Length = 282

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 73  QPPRINACPWCSSFIREFN 17
           +PPR   CPWC+  + +F+
Sbjct: 121 RPPRTYHCPWCNICVEDFD 139
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>ETFB_MOUSE (Q9DCW4) Electron transfer flavoprotein beta-subunit (Beta-ETF)|
          Length = 254

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = +2

Query: 221 PSSCPESALVAVALAVDRQWNCSSQATVLESVEHLQVTASLAPL 352
           PS C E+   A+A+  DR  +        ES+  LQV   LA L
Sbjct: 67  PSQCQETIRTALAMGADRGIHVEIPGAQAESLGPLQVARVLAKL 110
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>COBQ_VIBF1 (Q5E0T7) Cobyric acid synthase|
          Length = 495

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 18/61 (29%), Positives = 28/61 (45%)
 Frame = +3

Query: 6   RNIALNSLMKDEHHGQAFIRGGWHEPASSTAQDLTNVPRHQIAHPTTDRPNENYGRQIIA 185
           +N+ALNS + ++        GG    A +   D   V  H   +P   +PN + G Q+I 
Sbjct: 42  QNMALNSAVTED--------GGEIGRAQALQADAARVKPHVHMNPILLKPNTDIGAQVIV 93

Query: 186 Q 188
           Q
Sbjct: 94  Q 94
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>ZDH19_MOUSE (Q810M5) Probable palmitoyltransferase ZDHHC19 (EC 2.3.1.-) (Zinc|
           finger DHHC domain-containing protein 19) (DHHC-19)
          Length = 347

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 73  QPPRINACPWCSSFIREFN 17
           +PPR   CPWC+  + +F+
Sbjct: 121 RPPRTYHCPWCNICVEDFD 139
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>PNS1_DEBHA (Q6BIV4) Protein PNS1|
          Length = 513

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = -1

Query: 400 MTLTGVYGFWKYVSNLERRETR 335
           +T+ G+YG W Y+SN ++ E +
Sbjct: 278 ITIAGIYGTWYYLSNSDQGEPK 299
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>FOXN1_HUMAN (O15353) Forkhead box protein N1 (Transcription factor winged-helix|
           nude)
          Length = 648

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = -3

Query: 374 LEVREQPGEARDSPLP 327
           LE+R QPG  +DSPLP
Sbjct: 479 LELRAQPGTPQDSPLP 494
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>SYY_RHIME (Q92PK5) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA|
           ligase) (TyrRS)
          Length = 417

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -1

Query: 394 LTGVYGFWKYVSNLERRETRRYLEMFYAL 308
           + G Y FW+Y  N E  +  R+L+++  L
Sbjct: 251 MLGPYEFWQYWRNTEDADVARFLKLYTTL 279
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>SYY_AGRT5 (Q8UED2) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA|
           ligase) (TyrRS)
          Length = 417

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -1

Query: 394 LTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPL 275
           L  VY FW+Y  N E  +  R+ ++F  L    +A    L
Sbjct: 251 LLPVYDFWQYWRNTEDADVVRFAKLFTTLPMDEIARIATL 290


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,414,568
Number of Sequences: 219361
Number of extensions: 1070873
Number of successful extensions: 3229
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 2969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3118
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 1365190992
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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