ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl27d12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MATK_FROFL (Q5J309) Maturase K (Intron maturase) 30 1.5
2BXB_CLOBO (P10844) Botulinum neurotoxin type B precursor (EC 3.4... 30 1.9
3MATK_GOMPU (Q5J306) Maturase K (Intron maturase) 29 2.5
4MATK_GOMHA (Q5J308) Maturase K (Intron maturase) 29 2.5
5MATK_GRABR (Q95EE5) Maturase K (Intron maturase) 28 4.3
6PLDA2_ARATH (Q9SSQ9) Phospholipase D alpha 2 (EC 3.1.4.4) (AtPLD... 28 7.4
7ZG20_XENLA (P18714) Gastrula zinc finger protein XFG20-1 (XLCGF2... 28 7.4
8MATK_MAMHA (Q95EC9) Maturase K (Intron maturase) 28 7.4
9PLDA1_TOBAC (P93400) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD a... 27 9.7
10PLDA1_RICCO (Q41142) Phospholipase D alpha 1 precursor (EC 3.1.4... 27 9.7

>MATK_FROFL (Q5J309) Maturase K (Intron maturase)|
          Length = 505

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = -1

Query: 182 WF*SESIADRLT*SLNILLASLGLSCKMHT*EY*SLKIWQCFIS 51
           WF  E     +      LLAS G S  MH  +Y  +  WQC+ S
Sbjct: 267 WFFKEPFPHYVRYQGKALLASKGTSLLMHKWKYYFIYFWQCYFS 310



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>BXB_CLOBO (P10844) Botulinum neurotoxin type B precursor (EC 3.4.24.69)|
           (BoNT/B) (Bontoxilysin B) [Contains: Botulinum
           neurotoxin B light chain; Botulinum neurotoxin B heavy
           chain]
          Length = 1290

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +3

Query: 174 LEPSYRGSNNRICLQCGKRIISS*KHHLALPRLQLCKCI 290
           +E  YRG N  I  Q  + I    K HLA+ ++Q+CK +
Sbjct: 404 MEKEYRGQNKAINKQAYEEIS---KEHLAVYKIQMCKSV 439



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>MATK_GOMPU (Q5J306) Maturase K (Intron maturase)|
          Length = 505

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -1

Query: 131 LLASLGLSCKMHT*EY*SLKIWQCFIS 51
           LLAS G S  MH  +Y  +  WQC+ S
Sbjct: 284 LLASKGTSLLMHKWKYYFISFWQCYFS 310



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>MATK_GOMHA (Q5J308) Maturase K (Intron maturase)|
          Length = 505

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -1

Query: 131 LLASLGLSCKMHT*EY*SLKIWQCFIS 51
           LLAS G S  MH  +Y  +  WQC+ S
Sbjct: 284 LLASKGTSLLMHKWKYYFISFWQCYFS 310



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>MATK_GRABR (Q95EE5) Maturase K (Intron maturase)|
          Length = 510

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -1

Query: 131 LLASLGLSCKMHT*EY*SLKIWQCFIS 51
           +LAS G S  MH  +Y  +  WQC+ S
Sbjct: 289 ILASKGTSLLMHKWKYYLINFWQCYFS 315



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>PLDA2_ARATH (Q9SSQ9) Phospholipase D alpha 2 (EC 3.1.4.4) (AtPLDalpha2) (PLD|
           alpha 2) (Choline phosphatase 2)
           (Phosphatidylcholine-hydrolyzing phospholipase D 2)
          Length = 810

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 10/15 (66%), Positives = 14/15 (93%)
 Frame = -1

Query: 338 VLGIKSKHLPPILTT 294
           +LG+KS ++PPILTT
Sbjct: 796 ILGVKSDYMPPILTT 810



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>ZG20_XENLA (P18714) Gastrula zinc finger protein XFG20-1 (XLCGF20.1)|
          Length = 675

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
 Frame = +3

Query: 99  HLARQTKASQQNVQALGKTISYRL*LEPSYR---GSNNRICLQCGKRIISS*KHHLALPR 269
           HL   T     + +  GK+ +++  L+   R   G     C +CGK+       H  L  
Sbjct: 136 HLRVHTGEKPYSCEQCGKSFAHKCVLDSHQRTHTGDKPFSCTECGKKFSQRGNLHKHLKT 195

Query: 270 LQLCKCILCGENRGQVFGFDS 332
            +L +  LC E  G+ F F S
Sbjct: 196 HKLDQPHLCAE-CGKTFSFKS 215



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>MATK_MAMHA (Q95EC9) Maturase K (Intron maturase)|
          Length = 510

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -1

Query: 131 LLASLGLSCKMHT*EY*SLKIWQCFIS 51
           +LAS G S  MH  +Y  L  WQC  S
Sbjct: 288 ILASKGTSLLMHKWKYYLLNFWQCHFS 314



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>PLDA1_TOBAC (P93400) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1)|
           (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing
           phospholipase D 1)
          Length = 808

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = -1

Query: 338 VLGIKSKHLPPILTT 294
           VLG KS +LPPILTT
Sbjct: 794 VLGTKSDYLPPILTT 808



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>PLDA1_RICCO (Q41142) Phospholipase D alpha 1 precursor (EC 3.1.4.4) (PLD 1)|
           (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing
           phospholipase D 1)
          Length = 808

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = -1

Query: 338 VLGIKSKHLPPILTT 294
           VLG KS +LPPILTT
Sbjct: 794 VLGAKSDYLPPILTT 808


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,926,495
Number of Sequences: 219361
Number of extensions: 670334
Number of successful extensions: 1365
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1365
length of database: 80,573,946
effective HSP length: 88
effective length of database: 61,270,178
effective search space used: 1470484272
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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