Clone Name | rbastl27d12 |
---|---|
Clone Library Name | barley_pub |
>MATK_FROFL (Q5J309) Maturase K (Intron maturase)| Length = 505 Score = 30.0 bits (66), Expect = 1.5 Identities = 16/44 (36%), Positives = 20/44 (45%) Frame = -1 Query: 182 WF*SESIADRLT*SLNILLASLGLSCKMHT*EY*SLKIWQCFIS 51 WF E + LLAS G S MH +Y + WQC+ S Sbjct: 267 WFFKEPFPHYVRYQGKALLASKGTSLLMHKWKYYFIYFWQCYFS 310
>BXB_CLOBO (P10844) Botulinum neurotoxin type B precursor (EC 3.4.24.69)| (BoNT/B) (Bontoxilysin B) [Contains: Botulinum neurotoxin B light chain; Botulinum neurotoxin B heavy chain] Length = 1290 Score = 29.6 bits (65), Expect = 1.9 Identities = 15/39 (38%), Positives = 22/39 (56%) Frame = +3 Query: 174 LEPSYRGSNNRICLQCGKRIISS*KHHLALPRLQLCKCI 290 +E YRG N I Q + I K HLA+ ++Q+CK + Sbjct: 404 MEKEYRGQNKAINKQAYEEIS---KEHLAVYKIQMCKSV 439
>MATK_GOMPU (Q5J306) Maturase K (Intron maturase)| Length = 505 Score = 29.3 bits (64), Expect = 2.5 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = -1 Query: 131 LLASLGLSCKMHT*EY*SLKIWQCFIS 51 LLAS G S MH +Y + WQC+ S Sbjct: 284 LLASKGTSLLMHKWKYYFISFWQCYFS 310
>MATK_GOMHA (Q5J308) Maturase K (Intron maturase)| Length = 505 Score = 29.3 bits (64), Expect = 2.5 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = -1 Query: 131 LLASLGLSCKMHT*EY*SLKIWQCFIS 51 LLAS G S MH +Y + WQC+ S Sbjct: 284 LLASKGTSLLMHKWKYYFISFWQCYFS 310
>MATK_GRABR (Q95EE5) Maturase K (Intron maturase)| Length = 510 Score = 28.5 bits (62), Expect = 4.3 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = -1 Query: 131 LLASLGLSCKMHT*EY*SLKIWQCFIS 51 +LAS G S MH +Y + WQC+ S Sbjct: 289 ILASKGTSLLMHKWKYYLINFWQCYFS 315
>PLDA2_ARATH (Q9SSQ9) Phospholipase D alpha 2 (EC 3.1.4.4) (AtPLDalpha2) (PLD| alpha 2) (Choline phosphatase 2) (Phosphatidylcholine-hydrolyzing phospholipase D 2) Length = 810 Score = 27.7 bits (60), Expect = 7.4 Identities = 10/15 (66%), Positives = 14/15 (93%) Frame = -1 Query: 338 VLGIKSKHLPPILTT 294 +LG+KS ++PPILTT Sbjct: 796 ILGVKSDYMPPILTT 810
>ZG20_XENLA (P18714) Gastrula zinc finger protein XFG20-1 (XLCGF20.1)| Length = 675 Score = 27.7 bits (60), Expect = 7.4 Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 3/81 (3%) Frame = +3 Query: 99 HLARQTKASQQNVQALGKTISYRL*LEPSYR---GSNNRICLQCGKRIISS*KHHLALPR 269 HL T + + GK+ +++ L+ R G C +CGK+ H L Sbjct: 136 HLRVHTGEKPYSCEQCGKSFAHKCVLDSHQRTHTGDKPFSCTECGKKFSQRGNLHKHLKT 195 Query: 270 LQLCKCILCGENRGQVFGFDS 332 +L + LC E G+ F F S Sbjct: 196 HKLDQPHLCAE-CGKTFSFKS 215
>MATK_MAMHA (Q95EC9) Maturase K (Intron maturase)| Length = 510 Score = 27.7 bits (60), Expect = 7.4 Identities = 13/27 (48%), Positives = 15/27 (55%) Frame = -1 Query: 131 LLASLGLSCKMHT*EY*SLKIWQCFIS 51 +LAS G S MH +Y L WQC S Sbjct: 288 ILASKGTSLLMHKWKYYLLNFWQCHFS 314
>PLDA1_TOBAC (P93400) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1)| (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 808 Score = 27.3 bits (59), Expect = 9.7 Identities = 12/15 (80%), Positives = 13/15 (86%) Frame = -1 Query: 338 VLGIKSKHLPPILTT 294 VLG KS +LPPILTT Sbjct: 794 VLGTKSDYLPPILTT 808
>PLDA1_RICCO (Q41142) Phospholipase D alpha 1 precursor (EC 3.1.4.4) (PLD 1)| (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 808 Score = 27.3 bits (59), Expect = 9.7 Identities = 12/15 (80%), Positives = 13/15 (86%) Frame = -1 Query: 338 VLGIKSKHLPPILTT 294 VLG KS +LPPILTT Sbjct: 794 VLGAKSDYLPPILTT 808 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,926,495 Number of Sequences: 219361 Number of extensions: 670334 Number of successful extensions: 1365 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 1336 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1365 length of database: 80,573,946 effective HSP length: 88 effective length of database: 61,270,178 effective search space used: 1470484272 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)