>ASPM_FELCA (P62288) Abnormal spindle-like microcephaly-associated protein|
            homolog (Fragment)
          Length = 3461

 Score = 32.3 bits (72), Expect = 0.54
 Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = +1

Query: 133  YNIRRQNKRW-IMNQ*RELIQLYISINNSGRLRMHTHCR*NLSTKALALYIQSQIRSTNL 309
            Y +  Q K+W IM +   LIQ+Y      GR +   +    L TKA  + IQS  RS  +
Sbjct: 1982 YRMHVQQKKWDIMKKAARLIQMYYRAYRIGRRQRQLY----LKTKAAIVIIQSAYRSMRV 2037

Query: 310  TTQLPE 327
              ++ E
Sbjct: 2038 RKKIKE 2043

>ACBA_ACTS5 (Q9ZAE7) Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)|
           (dTDP-glucose synthase) (dTDP-glucose pyrophosphorylase)
          Length = 303

 Score = 32.0 bits (71), Expect = 0.70
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -1

Query: 307 DWWSGFEIGCIERAPWSRGFIDSVYACA 224
           D   G +IGC+E A W  GF+D+ +  A
Sbjct: 240 DEGQGIKIGCVEEAAWRAGFLDTAHVRA 267

>DRP2B_ARATH (Q9LQ55) Dynamin-2B (EC 3.6.5.5) (Dynamin-related protein 2B)|
           (Dynamin-like protein 3)
          Length = 920

 Score = 32.0 bits (71), Expect = 0.70
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = -3

Query: 440 SSSRRTPNRLPPAPPR 393
           SS R TPNRLPPAPP+
Sbjct: 898 SSRRTTPNRLPPAPPQ 913

>DRP2A_ARATH (Q9SE83) Dynamin-2A (EC 3.6.5.5) (Dynamin-related protein 2A)|
           (Dynamin-like protein 6)
          Length = 914

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = -3

Query: 440 SSSRRTPNRLPPAPP 396
           S+ R TPNRLPPAPP
Sbjct: 892 SNRRTTPNRLPPAPP 906

>RFBA1_KLEPN (Q48475) O-antigen export system permease protein rfbA|
          Length = 259

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -3

Query: 377 LVSMIYYYVFLLGTRSVSGNWVVRLVERI*DWMYRASA 264
           L +MIYY++F L  R    N+ V L+  +  W + AS+
Sbjct: 44  LFAMIYYFIFKLVMRVQIPNYTVFLITGLFPWQWFASS 81

>TILS_CHLTR (O84847) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)|
           (tRNA(Ile)-lysidine synthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase)
          Length = 321

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -3

Query: 155 LFWRLMLYKCFLGSFMGHPA 96
           LF+RL   KCF G F+GH A
Sbjct: 107 LFYRLCKEKCFSGVFLGHHA 126

>PRT1_ARATH (Q8LBL5) Ubiquitin protein ligase PRT1 (EC 6.3.2.-) (Proteolysis 1|
           protein)
          Length = 410

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 16/65 (24%), Positives = 27/65 (41%)
 Frame = +2

Query: 242 VDETSRPRRSLYTSNLKSAPPISPPNYQKQSVCLARIHNNKSWILISTTSISVALAATDL 421
           V+E S     L +S+ +   P  P N +        +H N+   L+    +S  ++  DL
Sbjct: 134 VEECSNAANLLSSSSSRGDIPCIPKNQEPTDAKALNVHENE---LLKDNKVSKQISKDDL 190

Query: 422 ACVGC 436
            C  C
Sbjct: 191 LCSAC 195


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,396,085
Number of Sequences: 219361
Number of extensions: 1320640
Number of successful extensions: 3081
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3081
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2628831825
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)