ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl27d05 |
|---|---|
| Clone Library Name | barley_pub |
>RS19_ORYSA (P40978) 40S ribosomal protein S19| Length = 146 Score = 109 bits (273), Expect = 2e-24 Identities = 52/55 (94%), Positives = 54/55 (98%) Frame = -3 Query: 296 RNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTV 132 RNGSRPPHFCKSSGA+SRNILQ+LQKMGIIDVDPKGGRLITSQGRRDLDQVAG V Sbjct: 87 RNGSRPPHFCKSSGAISRNILQQLQKMGIIDVDPKGGRLITSQGRRDLDQVAGRV 141
>RS193_ARATH (Q9FNP8) 40S ribosomal protein S19-3| Length = 143 Score = 91.3 bits (225), Expect = 6e-19 Identities = 42/57 (73%), Positives = 49/57 (85%) Frame = -3 Query: 296 RNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPA 126 RNGSRPPHFCKSSG V+R+ILQ+LQ M I+D+D KGGR ITS G+RDLDQVAG + A Sbjct: 85 RNGSRPPHFCKSSGGVARHILQQLQTMNIVDLDTKGGRKITSSGQRDLDQVAGRIAA 141
>RS192_ARATH (Q9LF30) 40S ribosomal protein S19-2| Length = 143 Score = 90.1 bits (222), Expect = 1e-18 Identities = 40/58 (68%), Positives = 50/58 (86%) Frame = -3 Query: 296 RNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPAE 123 RNGSRPPHFCKSSG ++R+ILQ+L+ M I+++D KGGR ITS G+RDLDQVAG + AE Sbjct: 85 RNGSRPPHFCKSSGGIARHILQQLETMSIVELDTKGGRRITSSGQRDLDQVAGRIAAE 142
>RS191_ARATH (Q9SGA6) 40S ribosomal protein S19-1| Length = 143 Score = 88.6 bits (218), Expect = 4e-18 Identities = 39/58 (67%), Positives = 49/58 (84%) Frame = -3 Query: 296 RNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPAE 123 RNGSRPPHFCKSSG ++R+ILQ+L+ M I+++D KGGR ITS G+RDLDQVAG + E Sbjct: 85 RNGSRPPHFCKSSGGIARHILQQLETMNIVELDTKGGRRITSSGQRDLDQVAGRIAVE 142
>RS19_MYAAR (Q94613) 40S ribosomal protein S19| Length = 149 Score = 71.6 bits (174), Expect = 5e-13 Identities = 29/55 (52%), Positives = 43/55 (78%) Frame = -3 Query: 296 RNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTV 132 R G+ P HFCK++G++SR +LQ L+ + I++ DP GGR +TSQGRRDLD++A + Sbjct: 83 RRGTAPSHFCKANGSISRRLLQSLEGLKIVEKDPNGGRRLTSQGRRDLDRIAAQI 137
>RS19_AEQIR (Q8ITC3) 40S ribosomal protein S19| Length = 144 Score = 65.9 bits (159), Expect = 3e-11 Identities = 27/55 (49%), Positives = 42/55 (76%) Frame = -3 Query: 296 RNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTV 132 RNG+ P H+C+SSG+V+R +LQ L+ +++ D GGR +TSQG++DLD++A V Sbjct: 83 RNGTVPSHYCRSSGSVARRVLQALETQKLVEKDANGGRKLTSQGQKDLDRIAAQV 137
>RS19_MYXGL (Q9Y0H3) 40S ribosomal protein S19| Length = 145 Score = 62.8 bits (151), Expect = 2e-10 Identities = 26/55 (47%), Positives = 41/55 (74%) Frame = -3 Query: 296 RNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTV 132 RNG+RP H+ + S V+R +LQ L+ + +++ DP GGR +TS G+RD+D++AG V Sbjct: 84 RNGTRPSHYSRGSRNVARKVLQSLEMLKMVEKDPNGGRRLTSIGQRDMDRIAGQV 138
>RS19_RAT (P17074) 40S ribosomal protein S19| Length = 144 Score = 62.8 bits (151), Expect = 2e-10 Identities = 28/57 (49%), Positives = 41/57 (71%) Frame = -3 Query: 296 RNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPA 126 RNG RP HF + S +V+R +LQ L+ + +++ D GGR +T QG+RDLD++AG V A Sbjct: 83 RNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVAA 139
>RS19_MOUSE (Q9CZX8) 40S ribosomal protein S19| Length = 144 Score = 62.8 bits (151), Expect = 2e-10 Identities = 28/57 (49%), Positives = 41/57 (71%) Frame = -3 Query: 296 RNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPA 126 RNG RP HF + S +V+R +LQ L+ + +++ D GGR +T QG+RDLD++AG V A Sbjct: 83 RNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVAA 139
>RS19_EMENI (P27073) 40S ribosomal protein S19 (S16)| Length = 148 Score = 61.2 bits (147), Expect = 6e-10 Identities = 30/57 (52%), Positives = 40/57 (70%), Gaps = 1/57 (1%) Frame = -3 Query: 290 GSRPPHFCKSSGAVSRNILQELQKMGIIDVD-PKGGRLITSQGRRDLDQVAGTVPAE 123 GSRP H +SGAV R +LQ L+K+G+++ D KGGR IT G+RDLD++A T E Sbjct: 86 GSRPAHHVDASGAVDRKVLQSLEKIGVLEQDEEKGGRRITQSGQRDLDRIAKTTVDE 142
>RS19_GILMI (Q9DFR5) 40S ribosomal protein S19| Length = 147 Score = 60.8 bits (146), Expect = 8e-10 Identities = 28/57 (49%), Positives = 40/57 (70%) Frame = -3 Query: 296 RNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPA 126 RNG P H+ + S V+R +LQ L+ + +I+ DP GGR +T+QG RDLD++AG V A Sbjct: 84 RNGVCPAHYSEGSKNVARKVLQALELLKMIEKDPNGGRRLTAQGTRDLDRIAGQVSA 140
>RS19_PONPY (Q5R8M9) 40S ribosomal protein S19| Length = 144 Score = 60.5 bits (145), Expect = 1e-09 Identities = 27/57 (47%), Positives = 40/57 (70%) Frame = -3 Query: 296 RNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPA 126 RNG P HF + S +V+R +LQ L+ + +++ D GGR +T QG+RDLD++AG V A Sbjct: 83 RNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVAA 139
>RS19_HUMAN (P39019) 40S ribosomal protein S19| Length = 144 Score = 60.5 bits (145), Expect = 1e-09 Identities = 27/57 (47%), Positives = 40/57 (70%) Frame = -3 Query: 296 RNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPA 126 RNG P HF + S +V+R +LQ L+ + +++ D GGR +T QG+RDLD++AG V A Sbjct: 83 RNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVAA 139
>RS19_ICTPU (Q90YQ4) 40S ribosomal protein S19| Length = 147 Score = 60.1 bits (144), Expect = 1e-09 Identities = 28/57 (49%), Positives = 38/57 (66%) Frame = -3 Query: 296 RNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPA 126 RNG P HF S V+R +LQ L+ + +++ DP GGR +T QG RDLD++AG V A Sbjct: 86 RNGVCPSHFSVGSKNVARKVLQALEALKMVEKDPNGGRRLTPQGTRDLDRIAGQVAA 142
>RS19_PAGMA (P61155) 40S ribosomal protein S19| Length = 146 Score = 59.7 bits (143), Expect = 2e-09 Identities = 28/57 (49%), Positives = 39/57 (68%) Frame = -3 Query: 296 RNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPA 126 RNG P H+ S V+R +LQ L+ + +I+ DP GGR +T+QG RDLD++AG V A Sbjct: 84 RNGVCPAHYSVGSKNVARKVLQALELLKMIEKDPNGGRRLTAQGTRDLDRIAGQVAA 140
>RS19B_YEAST (P07281) 40S ribosomal protein S19-B (S16B) (YS16) (RP55)| Length = 143 Score = 58.2 bits (139), Expect = 5e-09 Identities = 24/50 (48%), Positives = 38/50 (76%) Frame = -3 Query: 290 GSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVA 141 G RP +SG+++R +LQ L+K+GI+++ PKGGR I+ G+RDLD++A Sbjct: 86 GVRPYKHIDASGSINRKVLQALEKIGIVEISPKGGRRISENGQRDLDRIA 135
>RS19A_YEAST (P07280) 40S ribosomal protein S19-A (S16A) (YS16) (RP55) (YP45)| Length = 143 Score = 58.2 bits (139), Expect = 5e-09 Identities = 24/50 (48%), Positives = 38/50 (76%) Frame = -3 Query: 290 GSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVA 141 G RP +SG+++R +LQ L+K+GI+++ PKGGR I+ G+RDLD++A Sbjct: 86 GVRPYKHIDASGSINRKVLQALEKIGIVEISPKGGRRISENGQRDLDRIA 135
>RS19_PIG (Q29308) 40S ribosomal protein S19 (Fragment)| Length = 135 Score = 58.2 bits (139), Expect = 5e-09 Identities = 25/53 (47%), Positives = 38/53 (71%) Frame = -3 Query: 296 RNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAG 138 RNG P HF + S +V+R +LQ L+ + +++ D GGR +T QG+RDLD++AG Sbjct: 83 RNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAG 135
>RS19_BRABE (Q8T5Z4) 40S ribosomal protein S19| Length = 147 Score = 55.8 bits (133), Expect = 3e-08 Identities = 26/55 (47%), Positives = 38/55 (69%) Frame = -3 Query: 296 RNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTV 132 R G++P F S VSR +LQ L+ + +++ D GGR +TSQG+RDLD++AG V Sbjct: 85 RRGTKPAKFRVCSRGVSRTVLQSLEGIKMVEKDAAGGRRLTSQGQRDLDRIAGQV 139
>RS19A_SCHPO (P58234) 40S ribosomal protein S19-A (S16-A)| Length = 144 Score = 55.1 bits (131), Expect = 5e-08 Identities = 23/50 (46%), Positives = 35/50 (70%) Frame = -3 Query: 290 GSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVA 141 G RP H SG+V R ++Q L+K+G+++ GGR I+ QG+RDLD++A Sbjct: 86 GMRPSHHRDGSGSVQRKVVQSLEKIGVLEKSDNGGRRISQQGQRDLDRIA 135
>RS19B_SCHPO (P79016) 40S ribosomal protein S19-B (S16-B)| Length = 143 Score = 55.1 bits (131), Expect = 5e-08 Identities = 23/50 (46%), Positives = 35/50 (70%) Frame = -3 Query: 290 GSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVA 141 G RP H SG+V R ++Q L+K+G+++ GGR I+ QG+RDLD++A Sbjct: 86 GMRPSHHRDGSGSVQRKVVQSLEKIGVLEKSDNGGRRISQQGQRDLDRIA 135
>RS19A_DROME (P39018) 40S ribosomal protein S19a| Length = 155 Score = 54.3 bits (129), Expect = 8e-08 Identities = 22/55 (40%), Positives = 36/55 (65%) Frame = -3 Query: 296 RNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTV 132 RNG P HFC+++ +R LQ L+ +++ P GGR ++S G+RDLD++A + Sbjct: 83 RNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGGRKLSSIGQRDLDRIANQI 137
>RS19E_ARCFU (O28210) 30S ribosomal protein S19e| Length = 147 Score = 53.5 bits (127), Expect = 1e-07 Identities = 28/68 (41%), Positives = 45/68 (66%) Frame = -3 Query: 296 RNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPAEF* 117 R GS+PP F K SGA+ RN L +L+++G + + GR++T GR LD+VA + +E Sbjct: 80 RRGSKPPKFRKGSGAIVRNALHQLEQLGFVK-KTREGRVVTPMGRSFLDKVATELKSELV 138 Query: 116 SVEVPSMK 93 S E+P+++ Sbjct: 139 S-EIPALE 145
>RS19B_DROME (Q7KS38) 40S ribosomal protein S19b| Length = 154 Score = 52.8 bits (125), Expect = 2e-07 Identities = 24/58 (41%), Positives = 36/58 (62%) Frame = -3 Query: 296 RNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPAE 123 RNG RP C+SS R LQ L+ +++ P GGR +T QG+R+LD++A + A+ Sbjct: 83 RNGVRPSKHCRSSDGCIRKALQALEAANMVERHPDGGRKLTPQGQRNLDRIANKIVAK 140
>RS19E_METJA (P54057) 30S ribosomal protein S19e| Length = 148 Score = 52.0 bits (123), Expect = 4e-07 Identities = 27/65 (41%), Positives = 42/65 (64%) Frame = -3 Query: 290 GSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPAEF*SV 111 G P HF K SG + R LQEL+K+G+++ P+ GR++T +GR LD +A V E + Sbjct: 83 GHEPEHFYKGSGNIIRKALQELEKLGLVEKTPE-GRVVTPKGRSFLDNIAKEVRDEIIN- 140 Query: 110 EVPSM 96 E+P++ Sbjct: 141 EIPAL 145
>RS19S_ASCSU (P39698) 40S ribosomal protein S19S| Length = 150 Score = 50.8 bits (120), Expect = 9e-07 Identities = 24/53 (45%), Positives = 36/53 (67%), Gaps = 1/53 (1%) Frame = -3 Query: 296 RNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKG-GRLITSQGRRDLDQVA 141 R G P HF ++SG+V R LQ L+ + ++ P G GR++T QGR+DLD++A Sbjct: 85 RRGVTPNHFARASGSVIRKALQTLEAIKWVEKHPDGNGRILTKQGRKDLDRIA 137
>RS19G_ASCSU (P24494) 40S ribosomal protein S19G (Eliminated protein NO. 1)| Length = 148 Score = 50.1 bits (118), Expect = 1e-06 Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 1/53 (1%) Frame = -3 Query: 296 RNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKG-GRLITSQGRRDLDQVA 141 R G P HF K+SG+V R LQ L+ + + P G GR++T QGR+DLD++A Sbjct: 85 RRGVVPNHFAKASGSVIRKALQTLEAIKWVQKHPDGNGRVLTKQGRKDLDRIA 137
>RS19E_METTH (O27653) 30S ribosomal protein S19e| Length = 145 Score = 47.4 bits (111), Expect = 9e-06 Identities = 26/61 (42%), Positives = 38/61 (62%) Frame = -3 Query: 290 GSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPAEF*SV 111 GSRP F + SGA+ R LQ+L++ G+I + + GR+IT +GR LD+ A V E + Sbjct: 84 GSRPEKFRRGSGAIIRRALQQLEESGLIKRE-ENGRVITPEGRSFLDKAAAEVKKEVEGL 142 Query: 110 E 108 E Sbjct: 143 E 143
>RS19_CAEEL (O18650) 40S ribosomal protein S19| Length = 146 Score = 46.2 bits (108), Expect = 2e-05 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 1/53 (1%) Frame = -3 Query: 296 RNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKG-GRLITSQGRRDLDQVA 141 R G P HF S+G R +Q+L+K+ ++ P G GR+++ QGR+DLD++A Sbjct: 84 RRGVAPNHFQTSAGNCLRKAVQQLEKIKWVEKHPDGKGRILSKQGRKDLDRIA 136
>RS19E_AERPE (Q9YD22) 30S ribosomal protein S19e| Length = 153 Score = 46.2 bits (108), Expect = 2e-05 Identities = 24/56 (42%), Positives = 33/56 (58%) Frame = -3 Query: 290 GSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPAE 123 GS P HF K+ G+V R ILQ+L++ G++ P GR I+ GR LD A + E Sbjct: 86 GSAPEHFRKAGGSVPRKILQQLEEAGLVVKVPGRGRTISPAGRSLLDTTAREIMEE 141
>RS19E_PYRHO (O59041) 30S ribosomal protein S19e| Length = 150 Score = 45.8 bits (107), Expect = 3e-05 Identities = 23/66 (34%), Positives = 38/66 (57%) Frame = -3 Query: 290 GSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPAEF*SV 111 G P F K+ G++ R LQ+L+ G I+ P GR++T +GR LD++A + E + Sbjct: 84 GHAPERFYKAGGSIIRKALQQLEAAGFIEKVPGKGRVVTPKGRSFLDKIATELKKELEEI 143 Query: 110 EVPSMK 93 +P +K Sbjct: 144 -IPELK 148
>RS19_ENTHI (O15631) 40S ribosomal protein S19| Length = 148 Score = 45.4 bits (106), Expect = 4e-05 Identities = 22/47 (46%), Positives = 33/47 (70%) Frame = -3 Query: 281 PPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVA 141 P H SG V+R ILQ+L+KMGI+ + GR +T +GR+D+D++A Sbjct: 90 PSHRTLGSGKVNRYILQQLEKMGIVG-KIQSGRSLTKEGRKDMDKIA 135
>RS19E_THEAC (Q9HM21) 30S ribosomal protein S19e| Length = 150 Score = 31.6 bits (70), Expect = 0.54 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = -3 Query: 290 GSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVA 141 GS+ H + S ++ R + EL+K G + PK GR ++ QG LD + Sbjct: 84 GSKRYHAAQGSRSIIRYLFHELEKAGYVQKTPK-GRSLSPQGMSLLDNAS 132
>ATBF1_HUMAN (Q15911) Alpha-fetoprotein enhancer-binding protein (AT motif-binding| factor) (AT-binding transcription factor 1) Length = 3703 Score = 31.2 bits (69), Expect = 0.70 Identities = 14/44 (31%), Positives = 27/44 (61%) Frame = +1 Query: 70 PNPTTEHNFIDGTSTDQNSAGTVPATWSRSRLPWEVMSLPPLGS 201 P+P + T+++ +SAG P++ S++P E + +PPLG+ Sbjct: 1652 PSPVSTSGSNTFTTSNPSSAGIAPSSNLLSQVPTESVGMPPLGN 1695
>TRPF_SACKU (Q5XQP9) N-(5'-phosphoribosyl)anthranilate isomerase (EC 5.3.1.24)| (PRAI) Length = 226 Score = 30.8 bits (68), Expect = 0.92 Identities = 15/47 (31%), Positives = 24/47 (51%) Frame = -3 Query: 272 FCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTV 132 F + G N+ LQ G+I VD GG + + G +D+D++ V Sbjct: 175 FMLAGGLTPENVSDALQLHGVIGVDVSGG--VETNGMKDMDKITNFV 219
>PPGK_MYCLE (Q49988) Polyphosphate glucokinase (EC 2.7.1.63)| (Polyphosphate--glucose phosphotransferase) Length = 324 Score = 29.3 bits (64), Expect = 2.7 Identities = 14/40 (35%), Positives = 19/40 (47%) Frame = +1 Query: 52 HNSKL*PNPTTEHNFIDGTSTDQNSAGTVPATWSRSRLPW 171 HN KL PN H +DG +Q +A +V + S W Sbjct: 218 HNGKLIPNTEFGHLEVDGKEAEQRAASSVKDKYKWSYRTW 257
>TRPF_YEAST (P00912) N-(5'-phosphoribosyl)anthranilate isomerase (EC 5.3.1.24)| (PRAI) Length = 224 Score = 28.9 bits (63), Expect = 3.5 Identities = 15/48 (31%), Positives = 25/48 (52%) Frame = -3 Query: 275 HFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTV 132 HF + G N+ L+ G+I VD GG + + G +D +++A V Sbjct: 174 HFMLAGGLTPENVGDALRLNGVIGVDVSGG--VETNGVKDSNKIANFV 219
>S26A3_RAT (Q924C9) Chloride anion exchanger (DRA protein) (Down-regulated in| adenoma) (Solute carrier family 26 member 3) Length = 757 Score = 28.9 bits (63), Expect = 3.5 Identities = 14/30 (46%), Positives = 21/30 (70%) Frame = -3 Query: 236 LQELQKMGIIDVDPKGGRLITSQGRRDLDQ 147 +++LQK G+I V PK G + TS G +D D+ Sbjct: 571 IRKLQKQGLIQVTPK-GFICTSDGFKDSDE 599
>MMP17_HUMAN (Q9ULZ9) Matrix metalloproteinase-17 precursor (EC 3.4.24.-)| (MMP-17) (Membrane-type matrix metalloproteinase 4) (MT-MMP 4) (Membrane-type-4 matrix metalloproteinase) (MT4-MMP) Length = 606 Score = 27.7 bits (60), Expect = 7.8 Identities = 14/62 (22%), Positives = 26/62 (41%), Gaps = 3/62 (4%) Frame = +1 Query: 106 TSTDQNSAGTVPATWSRSRLPWEVMSLP---PLGSTSMMPIFCNS*RMLRETAPLLLQKC 276 T + P W++ L W V + P PLG ++ + + ++ + APL + Sbjct: 122 TQARRRRQAPAPTKWNKRNLSWRVRTFPRDSPLGHDTVRALMYYALKVWSDIAPLNFHEV 181 Query: 277 GG 282 G Sbjct: 182 AG 183 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,012,570 Number of Sequences: 219361 Number of extensions: 816195 Number of successful extensions: 2375 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 2317 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2367 length of database: 80,573,946 effective HSP length: 74 effective length of database: 64,341,232 effective search space used: 1544189568 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
