>ref|XM_463399.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 855

 Score =  157 bits (79), Expect = 3e-35
 Identities = 130/147 (88%)
 Strand = Plus / Plus

                                                                       
Query: 137 ttcatctacatcggtgacgggaagggggattactgcccctcccttaagctaagggaaggg 196
           ||||||||||| ||||| || |  || ||||| |||||||||||||||||| ||||||||
Sbjct: 559 ttcatctacattggtgatggcagaggagattattgcccctcccttaagctaggggaaggg 618

                                                                       
Query: 197 gactatgtcatgccaaaggagaattaccccctctggaatctcatcagcagcgatccccag 256
           ||||||||||||||||||||||| ||||||||||||||||||||||||||| |    |||
Sbjct: 619 gactatgtcatgccaaaggagaaataccccctctggaatctcatcagcagcaacaaacag 678

                                      
Query: 257 cttatcaaagctgaggttcatccatgg 283
           ||| |||| || |||||||||||||||
Sbjct: 679 cttctcaaggccgaggttcatccatgg 705

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  157 bits (79), Expect = 3e-35
 Identities = 130/147 (88%)
 Strand = Plus / Minus

                                                                            
Query: 137      ttcatctacatcggtgacgggaagggggattactgcccctcccttaagctaagggaaggg 196
                ||||||||||| ||||| || |  || ||||| |||||||||||||||||| ||||||||
Sbjct: 23580579 ttcatctacattggtgatggcagaggagattattgcccctcccttaagctaggggaaggg 23580520

                                                                            
Query: 197      gactatgtcatgccaaaggagaattaccccctctggaatctcatcagcagcgatccccag 256
                ||||||||||||||||||||||| ||||||||||||||||||||||||||| |    |||
Sbjct: 23580519 gactatgtcatgccaaaggagaaataccccctctggaatctcatcagcagcaacaaacag 23580460

                                           
Query: 257      cttatcaaagctgaggttcatccatgg 283
                ||| |||| || |||||||||||||||
Sbjct: 23580459 cttctcaaggccgaggttcatccatgg 23580433



 Score = 48.1 bits (24), Expect = 0.020
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                                
Query: 77       catgtgcagggcaagataatccagaggattca 108
                ||||||||||||||||||||  ||||||||||
Sbjct: 23580636 catgtgcagggcaagataattgagaggattca 23580605

>dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0518F01
          Length = 154541

 Score =  157 bits (79), Expect = 3e-35
 Identities = 130/147 (88%)
 Strand = Plus / Minus

                                                                         
Query: 137   ttcatctacatcggtgacgggaagggggattactgcccctcccttaagctaagggaaggg 196
             ||||||||||| ||||| || |  || ||||| |||||||||||||||||| ||||||||
Sbjct: 43278 ttcatctacattggtgatggcagaggagattattgcccctcccttaagctaggggaaggg 43219

                                                                         
Query: 197   gactatgtcatgccaaaggagaattaccccctctggaatctcatcagcagcgatccccag 256
             ||||||||||||||||||||||| ||||||||||||||||||||||||||| |    |||
Sbjct: 43218 gactatgtcatgccaaaggagaaataccccctctggaatctcatcagcagcaacaaacag 43159

                                        
Query: 257   cttatcaaagctgaggttcatccatgg 283
             ||| |||| || |||||||||||||||
Sbjct: 43158 cttctcaaggccgaggttcatccatgg 43132



 Score = 48.1 bits (24), Expect = 0.020
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 77    catgtgcagggcaagataatccagaggattca 108
             ||||||||||||||||||||  ||||||||||
Sbjct: 43335 catgtgcagggcaagataattgagaggattca 43304

>dbj|AP003504.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0025A05
          Length = 154298

 Score =  157 bits (79), Expect = 3e-35
 Identities = 130/147 (88%)
 Strand = Plus / Minus

                                                                          
Query: 137    ttcatctacatcggtgacgggaagggggattactgcccctcccttaagctaagggaaggg 196
              ||||||||||| ||||| || |  || ||||| |||||||||||||||||| ||||||||
Sbjct: 143884 ttcatctacattggtgatggcagaggagattattgcccctcccttaagctaggggaaggg 143825

                                                                          
Query: 197    gactatgtcatgccaaaggagaattaccccctctggaatctcatcagcagcgatccccag 256
              ||||||||||||||||||||||| ||||||||||||||||||||||||||| |    |||
Sbjct: 143824 gactatgtcatgccaaaggagaaataccccctctggaatctcatcagcagcaacaaacag 143765

                                         
Query: 257    cttatcaaagctgaggttcatccatgg 283
              ||| |||| || |||||||||||||||
Sbjct: 143764 cttctcaaggccgaggttcatccatgg 143738



 Score = 48.1 bits (24), Expect = 0.020
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                              
Query: 77     catgtgcagggcaagataatccagaggattca 108
              ||||||||||||||||||||  ||||||||||
Sbjct: 143941 catgtgcagggcaagataattgagaggattca 143910

>dbj|AK064442.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-110-E07, full
            insert sequence
          Length = 1768

 Score =  157 bits (79), Expect = 3e-35
 Identities = 130/147 (88%)
 Strand = Plus / Minus

                                                                        
Query: 137  ttcatctacatcggtgacgggaagggggattactgcccctcccttaagctaagggaaggg 196
            ||||||||||| ||||| || |  || ||||| |||||||||||||||||| ||||||||
Sbjct: 1638 ttcatctacattggtgatggcagaggagattattgcccctcccttaagctaggggaaggg 1579

                                                                        
Query: 197  gactatgtcatgccaaaggagaattaccccctctggaatctcatcagcagcgatccccag 256
            ||||||||||||||||||||||| ||||||||||||||||||||||||||| |    |||
Sbjct: 1578 gactatgtcatgccaaaggagaaataccccctctggaatctcatcagcagcaacaaacag 1519

                                       
Query: 257  cttatcaaagctgaggttcatccatgg 283
            ||| |||| || |||||||||||||||
Sbjct: 1518 cttctcaaggccgaggttcatccatgg 1492

>emb|CR848726.6| Zebrafish DNA sequence from clone CH211-244M8 in linkage group 2,
             complete sequence
          Length = 155408

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 121   tgccaagaacaagcacttcatctacatcg 149
             |||||||| ||||||||||||||||||||
Sbjct: 95457 tgccaagagcaagcacttcatctacatcg 95485

>ref|XM_679490.1| PREDICTED: Danio rerio similar to phospholipase D (LOC556641), mRNA
          Length = 2175

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                         
Query: 121  tgccaagaacaagcacttcatctacatcg 149
            |||||||| ||||||||||||||||||||
Sbjct: 1971 tgccaagagcaagcacttcatctacatcg 1999

>emb|BX119957.13| Human DNA sequence from clone DASS-182C6 on chromosome 6, complete
             sequence
          Length = 112118

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 302   ggaaggatccttcttaagttg 322
             |||||||||||||||||||||
Sbjct: 98869 ggaaggatccttcttaagttg 98849

>emb|AL845353.7| Human DNA sequence from clone DAQB-47P19 on chromosome 6 Contains the
             3' end of the MRPS18B gene for mitochondrial ribosomal
             protein S18B, the C6orf134 gene for chromosome 6 open
             reading frame 134, the C6orf136 gene for chromosome 6 open
             reading frame 136, the DHX16 gene for DEAD/H
             (Asp-Glu-Ala-Asp/His) box polypeptide 16, the KIAA1949
             gene, the NRM gene for nurim (nuclear envelope membrane
             protein), the RPL7P4 pseudogene for ribosomal protein L7
             pseudogene 4, the MDC1 gene for mediator of DNA damage
             checkpoint 1, the TUBB gene for tubulin, beta polypeptide,
             the FLOT1 gene for flotillin 1, the IER3 gene for
             immediate early response 3 and 8 CpG islands, complete
             sequence
          Length = 130755

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 302   ggaaggatccttcttaagttg 322
             |||||||||||||||||||||
Sbjct: 53464 ggaaggatccttcttaagttg 53444

>emb|AL732442.7| Human DNA sequence from clone XXbac-48F10 on chromosome 6 contains the
             3' end of the MRPS18B gene for mitochondrial ribosomal
             protein S18B, two novel proteins, a prothymosin, alpha
             (PTMA) pseudogene, the DDX16 gene for DEAD/H box
             polypeptide 16 , the gene for KIAA1949 protein, the NRM
             gene for nurim and four CpG islands, complete sequence
          Length = 71418

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 302   ggaaggatccttcttaagttg 322
             |||||||||||||||||||||
Sbjct: 47834 ggaaggatccttcttaagttg 47814

>emb|AL662798.4| Human DNA sequence from clone XXbac-27H4 on chromosome 6 contains the
             3' end of a novel protein, the DDX16 gene for DEAD/H box
             polypetide 16, the 3' end of a putative novel transcript
             and one CpG island, complete sequence
          Length = 29862

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 302   ggaaggatccttcttaagttg 322
             |||||||||||||||||||||
Sbjct: 21178 ggaaggatccttcttaagttg 21158

>emb|CR753328.11| Human DNA sequence from clone DADB-129D20 on chromosome 6, complete
             sequence
          Length = 105135

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 302   ggaaggatccttcttaagttg 322
             |||||||||||||||||||||
Sbjct: 94470 ggaaggatccttcttaagttg 94450

>emb|CR788240.3| Human DNA sequence from clone DAMC-316D20 on chromosome 6, complete
            sequence
          Length = 75074

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 302  ggaaggatccttcttaagttg 322
            |||||||||||||||||||||
Sbjct: 3768 ggaaggatccttcttaagttg 3748

>emb|CR759873.4| Human DNA sequence from clone DAAP-285E11 on chromosome 6, complete
             sequence
          Length = 72240

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 302   ggaaggatccttcttaagttg 322
             |||||||||||||||||||||
Sbjct: 11971 ggaaggatccttcttaagttg 11951

>gb|AC154395.4| Mus musculus chromosome 3, clone RP23-373G12, complete sequence
          Length = 255105

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 44     aatgaaaaccccatgaactaa 64
              |||||||||||||||||||||
Sbjct: 250943 aatgaaaaccccatgaactaa 250923

>emb|BX908728.7| Human DNA sequence from clone DAMA-178G23 on chromosome 6, complete
             sequence
          Length = 104755

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 302   ggaaggatccttcttaagttg 322
             |||||||||||||||||||||
Sbjct: 77655 ggaaggatccttcttaagttg 77635

>dbj|BA000025.2| Homo sapiens genomic DNA, chromosome 6p21.3, HLA Class I region
          Length = 2229817

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 302     ggaaggatccttcttaagttg 322
               |||||||||||||||||||||
Sbjct: 1271942 ggaaggatccttcttaagttg 1271962

>gb|AC115078.11| Mus musculus chromosome 3, clone RP24-457B22, complete sequence
          Length = 179789

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 44     aatgaaaaccccatgaactaa 64
              |||||||||||||||||||||
Sbjct: 143216 aatgaaaaccccatgaactaa 143236

>dbj|AB088098.1| Homo sapiens DBP2 gene for DEAD/H (Asp-Glu-Ala-Asp/His) box
            polypeptide 16, complete cds
          Length = 21071

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 302  ggaaggatccttcttaagttg 322
            |||||||||||||||||||||
Sbjct: 3685 ggaaggatccttcttaagttg 3705

>dbj|AB023049.1| Homo sapiens genomic DNA, chromosome 6p21.3, HLA class I region,
             clone:321E19, complete sequence
          Length = 123554

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 302   ggaaggatccttcttaagttg 322
             |||||||||||||||||||||
Sbjct: 44720 ggaaggatccttcttaagttg 44740

>ref|XM_957283.1| Neurospora crassa OR74A hypothetical protein (NCU06342.1) partial
            mRNA
          Length = 2937

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 130  caagcacttcatctacatcg 149
            ||||||||||||||||||||
Sbjct: 1278 caagcacttcatctacatcg 1297

>ref|XM_326196.1| Neurospora crassa OR74A hypothetical protein (NCU06342.1) partial
            mRNA
          Length = 2937

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 130  caagcacttcatctacatcg 149
            ||||||||||||||||||||
Sbjct: 1278 caagcacttcatctacatcg 1297

>gb|AC115766.9| Mus musculus chromosome 1, clone RP23-82I24, complete sequence
          Length = 225600

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 122    gccaagaacaagcacttcatctac 145
              |||| |||||||||||||||||||
Sbjct: 188118 gccatgaacaagcacttcatctac 188141

>emb|AL449223.7| Human DNA sequence from clone RP11-74N20 on chromosome 1 Contains the
             5' end of the NMNAT2 gene for nicotinamide nucleotide
             adenylyltransferase 2, a novel transcript, the 5' end of
             the C1orf16 gene for chromosome 1 open reading frame 16
             and a CpG island, complete sequence
          Length = 171467

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 3     gctgaatcctcggtgcattactcatgaa 30
             |||||||||| |||||||||||| ||||
Sbjct: 32604 gctgaatccttggtgcattactcttgaa 32577

>gb|AC041005.20| Homo sapiens chromosome 8, clone RP11-69M11, complete sequence
          Length = 87471

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 268  tgaggttcatccatggtgtagtga 291
            ||||||||||||||| ||||||||
Sbjct: 8874 tgaggttcatccatgttgtagtga 8851

>gb|AC073581.23| Homo sapiens 8 BAC RP11-429O2 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 176601

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 268    tgaggttcatccatggtgtagtga 291
              ||||||||||||||| ||||||||
Sbjct: 170574 tgaggttcatccatgttgtagtga 170551

>gb|AC044810.7| Homo sapiens chromosome 11, clone RP11-494M8, complete sequence
          Length = 194297

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 31  aagtggtgtgcacaatgaaa 50
           ||||||||||||||||||||
Sbjct: 486 aagtggtgtgcacaatgaaa 467

>gb|AC021427.10| Homo sapiens chromosome 11, clone RP11-399N15, complete sequence
          Length = 174147

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    aagtggtgtgcacaatgaaa 50
             ||||||||||||||||||||
Sbjct: 62538 aagtggtgtgcacaatgaaa 62519

>gb|U69730.1| Homo sapiens Xp22 Cosmids U98B4 and U24F2 (Lawrence Livermore human
             cosmid library) complete sequence
          Length = 64767

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 312   ttcttaagttggtgaacaag 331
             ||||||||||||||||||||
Sbjct: 50508 ttcttaagttggtgaacaag 50489


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,054,477
Number of Sequences: 3902068
Number of extensions: 3054477
Number of successful extensions: 54462
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54378
Number of HSP's gapped (non-prelim): 79
length of query: 361
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 339
effective length of database: 17,147,199,772
effective search space: 5812900722708
effective search space used: 5812900722708
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)