Clone Name | rbastl27d03 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | SEM1A_DROME (Q24322) Semaphorin-1A precursor (Semaphorin-I) (Sem... | 30 | 4.0 | 2 | CYB_MARPO (P26852) Cytochrome b | 28 | 8.9 |
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>SEM1A_DROME (Q24322) Semaphorin-1A precursor (Semaphorin-I) (Sema I)| Length = 850 Score = 29.6 bits (65), Expect = 4.0 Identities = 15/69 (21%), Positives = 28/69 (40%) Frame = -2 Query: 397 GSRDEDLSIKTSSGFGSNLLCWRGPKQSI*QKWMIKQDEPQSHKFCKFKILPQAGELTPF 218 G+R+ ++ L W P+ + +DE + + ++P G L Sbjct: 61 GARNTVFNLSIHDLVEQQRLVWTSPEDDTKMCLVKGKDEEACQNYIRIMVVPSPGRLFVC 120 Query: 217 GSNFFREVC 191 G+N FR +C Sbjct: 121 GTNSFRPMC 129
>CYB_MARPO (P26852) Cytochrome b| Length = 404 Score = 28.5 bits (62), Expect = 8.9 Identities = 17/47 (36%), Positives = 25/47 (53%) Frame = -1 Query: 467 IRYIFLHIWAL*AVSKIKFTSYLRFKR*RLVHQDFFWVWFEPTLLEG 327 I +F+ + AL ++ TSY+R R +HQ FFW+ LL G Sbjct: 298 IGLVFVSLLALPFIN----TSYVRSSSFRPIHQKFFWLLVADCLLLG 340 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,562,519 Number of Sequences: 219361 Number of extensions: 1230201 Number of successful extensions: 2170 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2138 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2170 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3014947676 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)