>CWF19_SCHPO (Q09909) Cell cycle control protein cwf19|
          Length = 639

 Score = 33.9 bits (76), Expect = 0.095
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +1

Query: 190 NQTGCETFHPGTENHHHSRHGNPGHPCHFGTHRPA 294
           N+T  ET H     HHHSRH    H  H  + RP+
Sbjct: 16  NETDRETNHSRRHRHHHSRHRESKHGRHDRSERPS 50

>SEPP1_RAT (P25236) Selenoprotein P precursor (SeP) [Contains: Selenoprotein|
           Se-P10; Selenoprotein Se-P6; Selenoprotein Se-P2;
           Selenoprotein Se-P1]
          Length = 385

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +1

Query: 196 TGCETFHPGTENHHHSRHGNPGHPCHFGTHRPAQS 300
           T  +T  P  E++HH  H   GH  H G+ +P+++
Sbjct: 193 TASKTTEPSEEHNHHKHHDKHGHE-HLGSSKPSEN 226

>HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor|
          Length = 351

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 16/55 (29%), Positives = 16/55 (29%)
 Frame = +1

Query: 166 HCHPL*TRNQTGCETFHPGTENHHHSRHGNPGHPCHFGTHRPAQSLLCQHSQTSH 330
           H HP         E  H     HHH  H  P H  H G H         H    H
Sbjct: 79  HHHPEEHHEPHHEEHHHHHPHPHHHHHHHPPHHHHHLGHHHHHHHAAHHHHHEEH 133



 Score = 27.3 bits (59), Expect = 8.9
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +1

Query: 214 HPGTENHHHSRHGNPGHPCHFGTH 285
           H G  +HHH  HG+  H  H   H
Sbjct: 221 HHGHHHHHHHHHGHHHHHHHHHGH 244

>CAUP_DROME (P54269) Homeobox protein caupolican|
          Length = 693

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 14/55 (25%), Positives = 20/55 (36%)
 Frame = +1

Query: 118 YQTSNFYRACLGSPCVHCHPL*TRNQTGCETFHPGTENHHHSRHGNPGHPCHFGT 282
           Y   NFY        +   PL    Q   +      ++HHH  H +P H    G+
Sbjct: 480 YLGQNFYPPSSADQQLPHQPLQQHQQQQLQQLQQQQQHHHHPHHHHPHHSMELGS 534

>GSC_DROME (P54366) Homeobox protein goosecoid|
          Length = 419

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +1

Query: 220 GTENHHHSRHGNPGHPCHFGTHRPAQ 297
           G  +H H  HG+P HP H G H   Q
Sbjct: 247 GHGHHPHHPHGHPHHP-HLGAHHHGQ 271

>TRK1_SACBA (P28569) High-affinity potassium transport protein|
          Length = 1241

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 7/109 (6%)
 Frame = +1

Query: 97  ARNLSQIYQTSNFYRACLGSPCVHCH--PL*TRNQTGCETFHPGT----ENHHHSRHGNP 258
           AR+L+++ +T +F +    +   H    P   R     + F  G      +H++  +GN 
Sbjct: 602 ARDLNELARTPDFQKMVYKNWKAHHRNKPNFKRRGWNGKMFEHGPYTSDSDHNYQDNGNN 661

Query: 259 GHPC-HFGTHRPAQSLLCQHSQTSHRRGDRLVTIQSSPATFPYWTSLDH 402
            +   H+     A+S+L  H   SHR G   V+  S+  T+P   + DH
Sbjct: 662 SNSIVHY-----AESIL--HRDNSHRNGSEDVSSDSNETTYPLNGNNDH 703

>ERC2_MOUSE (Q6PH08) ERC protein 2 (CAZ-associated structural protein 1) (CAST1)|
          Length = 957

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +1

Query: 205  ETFHPGTENHHHSRHGNPGHPCHFGTHRPA 294
            E  H    +HHH  H +PG   H   HRP+
Sbjct: 918  EDHHHYHHHHHHHHHRSPGRSQH-SNHRPS 946

>LAB_DROME (P10105) Homeotic protein labial (F24) (F90-2)|
          Length = 635

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
 Frame = +1

Query: 250 GNPGHPCHFGTHRPAQSLLCQHSQTSHRRGDRLVTI----QSSPAT 375
           GNPG P H  +H PA S     S  S+     + T+     SSP T
Sbjct: 135 GNPGTPLHPSSHSPADSYYESDSVHSYYATAAVATVAPPSNSSPIT 180

>YDH3_PLAFS (P14589) Hypothetical protein 3' to Asp-rich and His-rich proteins|
           (Fragment)
          Length = 53

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 320 WLCWQRRLWAGRW 282
           W CW+RR W  RW
Sbjct: 13  WWCWRRRGWRRRW 25

>Y2392_ARCFU (O30279) Hypothetical protein AF2392|
          Length = 86

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 3/27 (11%)
 Frame = -2

Query: 284 WVPK*QGWPGFPWRLWWWF---SVPGW 213
           W+P   GW G  WR  WW+    +PGW
Sbjct: 4   WMP---GWGGRGWR--WWYRATGLPGW 25

>POL_HV1RH (P05959) Gag-Pol polyprotein (Pr160Gag-Pol) [Contains: Matrix protein|
            p17 (MA); Capsid protein p24 (CA); p2 spacer peptide;
            Nucleocapsid protein* (NC*); Transframe peptide (TF) (p6
            pol); Protease (EC 3.4.23.16) (Retropepsin) (PR); Reverse
            trans
          Length = 1435

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
 Frame = -2

Query: 377  KVAGELCIVTRRSPR-----RWEVWLCWQRRLWAGRWVPK 273
            KVA E  ++  ++P+     + E W  W    W   W+P+
Sbjct: 961  KVATESIVIWGKTPKFKLPIQKETWEAWWTEYWQATWIPE 1000

>LRCH1_HUMAN (Q9Y2L9) Leucine-rich repeats and calponin homology|
           domain-containing protein 1 (Calponin homology
           domain-containing protein 1) (Neuronal protein 81)
           (NP81)
          Length = 728

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +1

Query: 214 HPGTENHHHSRHGNPGHP 267
           HP   +HHH  HG  G P
Sbjct: 25  HPHHHHHHHQHHGGTGAP 42

>POU23_BRARE (P79745) POU domain protein ZP-23|
          Length = 443

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +1

Query: 187 RNQTGCETFHPGTENHHHSRHGNPGHPCHFG 279
           +N +G +  H GT  HH + H  P H  H G
Sbjct: 119 KNNSGRDDLHSGTALHHRAPHLGP-HQTHAG 148

>POL_HV1N5 (P12497) Gag-Pol polyprotein (Pr160Gag-Pol) [Contains: Matrix protein|
            p17 (MA); Capsid protein p24 (CA); p2 spacer peptide;
            Nucleocapsid protein* (NC*); Transframe peptide (TF) (p6
            pol); Protease (EC 3.4.23.16) (Retropepsin) (PR); Reverse
            trans
          Length = 1434

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
 Frame = -2

Query: 377  KVAGELCIVTRRSPR-----RWEVWLCWQRRLWAGRWVPK 273
            K+A E  ++  ++P+     + E W  W    W   W+P+
Sbjct: 960  KIATESIVIWGKTPKFKLPIQKETWEAWWTEYWQATWIPE 999

>POL_HV1MA (P04588) Gag-Pol polyprotein (Pr160Gag-Pol) [Contains: Matrix protein|
            p17 (MA); Capsid protein p24 (CA); p2 spacer peptide;
            Nucleocapsid protein* (NC*); Transframe peptide (TF) (p6
            pol); Protease (EC 3.4.23.16) (Retropepsin) (PR); Reverse
            trans
          Length = 1439

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
 Frame = -2

Query: 377  KVAGELCIVTRRSPR-----RWEVWLCWQRRLWAGRWVPK 273
            K+A E  ++  ++P+     + E W  W    W   W+P+
Sbjct: 965  KIAQESIVIWGKTPKFRLPIQKETWEAWWTEYWQATWIPE 1004

>PKNA2_BIFLO (Q8G4G1) Probable serine/threonine-protein kinase pknA2 (EC|
           2.7.11.1)
          Length = 757

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 9/16 (56%), Positives = 11/16 (68%), Gaps = 2/16 (12%)
 Frame = -2

Query: 239 WWWFSVPG--WKVSQP 198
           WWWF+ PG  W V +P
Sbjct: 445 WWWFAGPGSYWSVPKP 460


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,917,342
Number of Sequences: 219361
Number of extensions: 972529
Number of successful extensions: 2978
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2934
length of database: 80,573,946
effective HSP length: 111
effective length of database: 56,224,875
effective search space used: 1349397000
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)